Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14824 Davidia involucrata HOM05D004097 ORTHO05D005352 0.0e+00 1668.7 808 100.0
Hma1.2p1_0668F.1_g200000 Hydrangea macrophylla HOM05D004097 ORTHO05D005352 0.0e+00 1423.3 810 84.1
Actinidia20697 Actinidia chinensis HOM05D004097 ORTHO05D005352 0.0e+00 1379.8 810 80.9
GSVIVG01010441001 Vitis vinifera HOM05D004097 ORTHO05D005352 0.0e+00 1371.3 808 80.4
CSS0033535 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 0.0e+00 1357.0 809 80.1
CSS0021321 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 0.0e+00 1352.4 809 79.9
Cfa009333 Carpinus fangiana HOM05D004097 ORTHO05D005352 0.0e+00 1334.7 810 78.6
QL03p053766 Quercus lobata HOM05D004097 ORTHO05D005352 0.0e+00 1333.2 809 77.9
CiPaw.05G112000 Carya illinoinensis HOM05D004097 ORTHO05D005352 0.0e+00 1331.2 809 78.9
Lj6C825T6 Lonicera japonica HOM05D004097 ORTHO05D005352 0.0e+00 1325.1 839 75.9
TWI36G0618 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 0.0e+00 1299.3 808 76.0
Manes.13G018100 Manihot esculenta HOM05D004097 ORTHO05D005352 0.0e+00 1298.9 809 75.9
Ciclev10030695m.g Citrus clementina HOM05D004097 ORTHO05D005352 0.0e+00 1291.6 810 75.1
Rhsim12G0102000 Rhododendron simsii HOM05D004097 ORTHO05D005352 0.0e+00 1291.6 929 68.8
TAR629G3065 Trochodendron aralioides HOM05D004097 ORTHO05D005352 0.0e+00 1290.4 841 73.6
Thecc.02G212500 Theobroma cacao HOM05D004097 ORTHO05D005352 0.0e+00 1281.5 810 75.3
Nn4g22358 Nelumbo nucifera HOM05D004097 ORTHO05D005352 0.0e+00 1277.7 811 73.2
COL.COLO4_20377 Corchorus olitorius HOM05D004097 ORTHO05D005352 0.0e+00 1269.2 812 75.0
Duzib251G0245 Durio zibethinus HOM05D004097 ORTHO05D005352 0.0e+00 1265.0 811 74.5
CANSAT01G0794 Cannabis sativa HOM05D004097 ORTHO05D005352 0.0e+00 1261.9 810 73.6
TWI18G1202 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 0.0e+00 1258.8 808 74.1
PGR102G2071 Punica granatum HOM05D004097 ORTHO05D005352 0.0e+00 1251.5 809 72.7
Prupe.1G228800 Prunus persica HOM05D004097 ORTHO05D005352 0.0e+00 1250.3 809 73.9
Potri.010G059000 Populus trichocarpa HOM05D004097 ORTHO05D005352 0.0e+00 1248.8 809 73.8
Gorai.002G191800 Gossypium raimondii HOM05D004097 ORTHO05D005352 0.0e+00 1243.4 811 73.6
Gohir.D01G154900 Gossypium hirsutum HOM05D004097 ORTHO05D005352 0.0e+00 1238.0 811 73.2
FvH4_4g23960 Fragaria vesca HOM05D004097 ORTHO05D005352 0.0e+00 1233.8 809 72.1
Gohir.A01G155000 Gossypium hirsutum HOM05D004097 ORTHO05D005352 0.0e+00 1232.6 811 72.9
RcHm_v2.0_Chr4g0430631 Rosa chinensis HOM05D004097 ORTHO05D005352 0.0e+00 1231.5 815 72.1
Eucgr.B03480 Eucalyptus grandis HOM05D004097 ORTHO05D005352 0.0e+00 1226.8 812 71.7
Oeu019032.1 Olea europaea HOM05D004097 ORTHO05D005352 0.0e+00 1225.7 810 71.5
MD13G1116700 Malus domestica HOM05D004097 ORTHO05D005352 0.0e+00 1225.3 811 73.0
Duzib248G1376 Durio zibethinus HOM05D004097 ORTHO05D005352 0.0e+00 1224.9 813 72.3
FAN07G0057 Fragaria x ananassa HOM05D004097 ORTHO05D005352 0.0e+00 1217.2 819 70.7
EL10Ac6g13480 Beta vulgaris HOM05D004097 ORTHO05D005352 0.0e+00 1212.2 813 70.7
Cc00_g13540 Coffea canephora HOM05D004097 ORTHO05D005352 0.0e+00 1209.5 810 71.0
CsaV3_5G030370 Cucumis sativus L. HOM05D004097 ORTHO05D005352 0.0e+00 1209.1 811 70.8
FAN12G2099 Fragaria x ananassa HOM05D004097 ORTHO05D005352 0.0e+00 1204.5 818 70.0
Aqoxy5G03417 Aquilegia oxysepala HOM05D004097 ORTHO05D005352 0.0e+00 1202.6 812 70.9
Lj4g0020055 Lotus japonicus HOM05D004097 ORTHO05D005352 0.0e+00 1200.3 811 70.8
Sopen05g010470 Solanum pennellii HOM05D004097 ORTHO05D005352 0.0e+00 1199.1 809 70.8
ClCG11G013780 Citrullus lanatus HOM05D004097 ORTHO05D005352 0.0e+00 1198.0 812 69.7
FAN17G1448 Fragaria x ananassa HOM05D004097 ORTHO05D005352 0.0e+00 1197.2 827 69.4
VMungo0251G0768 Vigna mungo HOM05D004097 ORTHO05D005352 0.0e+00 1193.7 809 70.0
MELO3C011876.2 Cucumis melo HOM05D004097 ORTHO05D005352 0.0e+00 1192.6 811 70.3
Ca_18044_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 0.0e+00 1190.3 810 68.9
CAN.G1548.3 Capsicum annuum HOM05D004097 ORTHO05D005352 0.0e+00 1189.5 808 70.2
MBI11_g07450_MAGBIO Magnolia biondii HOM05D004097 ORTHO05D005352 0.0e+00 1187.6 819 70.6
Psat7g078160 Pisum sativum HOM05D004097 ORTHO05D005352 0.0e+00 1185.2 810 69.1
TPR.G17087 Trifolium pratense HOM05D004097 ORTHO05D005352 0.0e+00 1185.2 810 69.6
Sabra10G0046600 Salix brachista HOM05D004097 ORTHO05D005352 0.0e+00 1184.1 809 71.1
Migut.K00711 Erythranthe guttata HOM05D004097 ORTHO05D005352 0.0e+00 1183.3 808 70.5
Medtr8g080360 Medicago truncatula HOM05D004097 ORTHO05D005352 0.0e+00 1182.9 812 69.3
Hund25455 Selenicereus undatus HOM05D004097 ORTHO05D005352 0.0e+00 1182.9 813 69.1
MD16G1117400 Malus domestica HOM05D004097 ORTHO05D005352 0.0e+00 1181.4 815 70.7
Glyma.05G146500 Glycine max HOM05D004097 ORTHO05D005352 0.0e+00 1178.3 811 69.2
CAN.G311.73 Capsicum annuum HOM05D004097 ORTHO05D005352 0.0e+00 1175.6 832 68.0
arahy.Tifrunner.gnm1.ann1.11CB4V Arachis hypogaea HOM05D004097 ORTHO05D005352 0.0e+00 1174.5 813 69.6
MSTRG.7991 Avicennia marina HOM05D004097 ORTHO05D005352 0.0e+00 1173.3 808 69.6
PSO017G2193 Papaver somniferum HOM05D004097 ORTHO05D005352 0.0e+00 1173.3 813 68.3
AUR62005598 Chenopodium quinoa HOM05D004097 ORTHO05D005352 0.0e+00 1170.6 835 66.6
Sed0007371 Sechium edule HOM05D004097 ORTHO05D005352 0.0e+00 1168.3 809 69.5
Phvul.002G174800 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 0.0e+00 1167.9 809 68.5
HanXRQChr17g0540261 Helianthus annuus HOM05D004097 ORTHO05D005352 0.0e+00 1162.5 814 68.4
PSO478G3686 Papaver somniferum HOM05D004097 ORTHO05D005352 0.0e+00 1161.7 814 67.4
arahy.Tifrunner.gnm1.ann1.7LT28F Arachis hypogaea HOM05D004097 ORTHO05D005352 0.0e+00 1160.6 813 69.0
Atru.chr11.2303 Acer truncatum HOM05D004097 ORTHO05D005352 0.0e+00 1159.8 765 73.2
Lalb_Chr13g0294221 Lupinus albus HOM05D004097 ORTHO05D005352 0.0e+00 1159.8 811 69.2
ECA246G4064 Erigeron canadensis HOM05D004097 ORTHO05D005352 0.0e+00 1146.7 812 68.1
AT1G67490 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 0.0e+00 1138.3 816 65.9
SalBow2G2696 Salvia bowleyana HOM05D004097 ORTHO05D005352 0.0e+00 1137.9 791 68.5
Carub.0002s1382 Capsella rubella HOM05D004097 ORTHO05D005352 0.0e+00 1132.1 812 65.5
AUR62024129 Chenopodium quinoa HOM05D004097 ORTHO05D005352 0.0e+00 1132.1 811 66.0
THA.LOC104807884 Tarenaya hassleriana HOM05D004097 ORTHO05D005352 0.0e+00 1128.2 810 65.8
Sp5g22470 Schrenkiella parvula HOM05D004097 ORTHO05D005352 0.0e+00 1127.5 814 65.8
Psat7g078280 Pisum sativum HOM05D004097 ORTHO05D005352 0.0e+00 1122.8 811 66.3
Lsat_1_v5_gn_3_29780 Lactuca sativa HOM05D004097 ORTHO05D005352 0.0e+00 1122.5 811 67.0
AL2G26080 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 0.0e+00 1120.5 845 63.1
TPR.G17069 Trifolium pratense HOM05D004097 ORTHO05D005352 0.0e+00 1117.8 814 65.7
Glyma.05G146400 Glycine max HOM05D004097 ORTHO05D005352 0.0e+00 1116.3 810 66.7
BraA07t30877Z Brassica rapa HOM05D004097 ORTHO05D005352 0.0e+00 1112.1 817 65.7
C06p38670 Brassica napus HOM05D004097 ORTHO05D005352 0.0e+00 1110.5 816 65.4
BolC6t38956H Brassica oleracea HOM05D004097 ORTHO05D005352 0.0e+00 1109.4 816 65.2
Ah.02g130710 Amaranthus hybridus HOM05D004097 ORTHO05D005352 0.0e+00 1107.0 815 65.5
A07p32530 Brassica napus HOM05D004097 ORTHO05D005352 0.0e+00 1103.2 818 65.3
Thhalv10018104m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 0.0e+00 1103.2 848 63.6
ATR0561G059 Amborella trichopoda HOM05D004097 ORTHO05D005352 0.0e+00 1102.8 809 65.1
SGA_v2.0_scaffold130G34253 Striga asiatica HOM05D004097 ORTHO05D005352 0.0e+00 1101.3 777 67.8
DCAR_031191 Daucus carota HOM05D004097 ORTHO05D005352 0.0e+00 1089.3 747 70.0
Aa31sc781G10 Aethionema arabicum HOM05D004097 ORTHO05D005352 0.0e+00 1084.7 830 63.1
HPP92_023192 Vanilla planifolia HOM05D004097 ORTHO05D005352 0.0e+00 1083.2 819 63.7
Solyc05g015220.3 Solanum lycopersicum HOM05D004097 ORTHO05D005352 1.4e-310 1069.3 684 73.1
Medtr8g080290 Medicago truncatula HOM05D004097 ORTHO05D005352 3.2e-310 1068.1 808 63.4
PSO675G1898 Papaver somniferum HOM05D004097 ORTHO05D005352 1.6e-309 1065.8 732 68.4
Lalb_Chr13g0294231 Lupinus albus HOM05D004097 ORTHO05D005352 5.7e-307 1057.4 709 69.5
CARHR026770 Cardamine hirsuta HOM05D004097 ORTHO05D005352 2.7e-301 1038.5 737 64.9
Thhalv10006835m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 7.9e-301 1036.9 735 66.0
Peaxi162Scf00128g01140 Petunia axillaris HOM05D004097 ORTHO05D005352 1.0e-300 1036.6 675 71.7
Ca_18045_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 1.3e-300 1036.2 839 60.7
CDE05G0715 Ceratophyllum demersum HOM05D004097 ORTHO05D005352 3.1e-297 1025.0 809 60.9
Sp1g23450 Schrenkiella parvula HOM05D004097 ORTHO05D005352 1.2e-296 1023.1 734 65.1
Carub.0001s2575 Capsella rubella HOM05D004097 ORTHO05D005352 2.0e-296 1022.3 729 65.6
C07p17980 Brassica napus HOM05D004097 ORTHO05D005352 2.6e-296 1021.9 744 64.9
AL1G40600 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 4.5e-296 1021.1 735 64.2
BcaB03g15361 Brassica carinata HOM05D004097 ORTHO05D005352 4.5e-296 1021.1 822 61.8
AT1G24320 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 2.2e-295 1018.8 739 64.0
BcaC06g35272 Brassica carinata HOM05D004097 ORTHO05D005352 1.9e-294 1015.8 742 64.7
Os01g0921200 Oryza sativa ssp. japonica HOM05D004097 ORTHO05D005352 1.6e-293 1012.7 778 59.9
Zm00001eb143210 Zea mays HOM05D004097 ORTHO05D005352 2.0e-291 1005.7 727 62.7
BcaB03g13996 Brassica carinata HOM05D004097 ORTHO05D005352 9.7e-291 1003.4 743 63.8
A07p12040 Brassica napus HOM05D004097 ORTHO05D005352 4.8e-290 1001.1 774 62.5
SHI17952 Sapria himalayana HOM05D004097 ORTHO05D005352 4.8e-290 1001.1 871 57.4
BcaB03g13994 Brassica carinata HOM05D004097 ORTHO05D005352 2.6e-288 995.3 745 63.6
SEGI_39835 Sequoiadendron giganteum HOM05D004097 ORTHO05D005352 4.5e-288 994.6 806 58.6
BolC7t42308H Brassica oleracea HOM05D004097 ORTHO05D005352 1.2e-280 969.9 744 62.6
Sc04g0010030 Simmondsia chinensis HOM05D004097 ORTHO05D005352 1.0e-279 966.8 650 71.1
Haze_12390 Corylus avellana HOM05D004097 ORTHO05D005352 2.7e-277 958.7 598 78.1
DCAR_026468 Daucus carota HOM05D004097 ORTHO05D005352 3.6e-277 958.4 763 62.3
Aa31LG7G6710 Aethionema arabicum HOM05D004097 ORTHO05D005352 4.9e-258 894.8 766 57.2
Mapoly0071s0095 Marchantia polymorpha HOM05D004097 ORTHO05D005352 1.3e-239 833.6 769 52.9
Sp1g06290 Schrenkiella parvula HOM05D004097 ORTHO05D005352 4.3e-238 828.6 727 55.6
SMO358G0259 Selaginella moellendorffii HOM05D004097 ORTHO05D005352 4.3e-230 802.0 791 49.7
A10p06090 Brassica napus HOM05D004097 ORTHO05D005352 5.6e-230 801.6 754 52.9
Pp3c11_13660 Physcomitrium patens HOM05D004097 ORTHO05D005352 3.3e-222 775.8 764 48.8
Oeu036882.3 Olea europaea HOM05D004097 ORTHO05D005352 8.1e-213 744.6 616 62.0
CBR_g11887 Chara braunii HOM05D004097 ORTHO05D005352 9.0e-212 741.1 746 48.8
Nitab4.5_0005179g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 3.2e-209 732.6 584 61.5
BcaB02g06725 Brassica carinata HOM05D004097 ORTHO05D005352 2.1e-208 729.9 730 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2645 Anthoceros agrestis HOM05D004097 ORTHO05D005352 1.9e-198 696.8 725 47.2
CARHR060060 Cardamine hirsuta HOM05D004097 ORTHO05D005352 1.4e-193 680.6 431 72.4
unitig_22.g6409 Utricularia gibba HOM05D004097 ORTHO05D005352 2.3e-191 673.3 536 61.0
VMungo0251G3132 Vigna mungo HOM05D004097 ORTHO05D005352 2.8e-189 666.4 464 68.3
Nitab4.5_0002174g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 5.3e-188 662.1 394 76.4
Phvul.002G174901 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 2.2e-186 656.8 504 62.1
Ca_18046_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 3.6e-176 622.9 389 73.5
BolC5t29329H Brassica oleracea HOM05D004097 ORTHO05D005352 6.7e-167 592.0 624 50.5
Haze_12355 Corylus avellana HOM05D004097 ORTHO05D005352 4.1e-164 582.8 776 44.8
Glyma.08G103233 Glycine max HOM05D004097 ORTHO05D005352 2.5e-161 573.5 388 69.1
C05p05580 Brassica napus HOM05D004097 ORTHO05D005352 2.0e-158 563.9 574 52.1
Cre13.g579734 Chlamydomonas reinhardtii HOM05D004097 ORTHO05D005352 3.4e-150 536.6 857 38.4
Cpa.g.sc1279.1 Carica papaya HOM05D004097 ORTHO05D005352 1.3e-149 534.6 435 62.8
Glyma.08G103167 Glycine max HOM05D004097 ORTHO05D005352 3.2e-145 520.0 406 62.6
Nitab4.5_0002174g0020 Nicotiana tabacum HOM05D004097 ORTHO05D005352 2.8e-128 463.8 339 65.2
Prupe.1G228900 Prunus persica HOM05D004097 ORTHO05D005352 2.7e-123 447.2 393 58.0
FAN22G1343 Fragaria x ananassa HOM05D004097 ORTHO05D005352 9.5e-121 438.7 404 55.9
VMungo0251G3103 Vigna mungo HOM05D004097 ORTHO05D005352 4.9e-117 426.4 281 70.5
MD16G1117300 Malus domestica HOM05D004097 ORTHO05D005352 6.4e-117 426.0 399 57.1
Haze_12391 Corylus avellana HOM05D004097 ORTHO05D005352 1.3e-109 401.7 228 81.6
Nitab4.5_0005179g0020 Nicotiana tabacum HOM05D004097 ORTHO05D036916 2.6e-78 297.7 208 68.8
unitig_22.g6408 Utricularia gibba HOM05D004097 ORTHO05D005352 7.9e-75 286.2 201 67.2
Cfa024667 Carpinus fangiana HOM05D004097 ORTHO05D005352 1.6e-72 278.5 489 33.7
BraA10t42875Z Brassica rapa HOM05D004097 ORTHO05D108425 4.5e-70 270.4 698 30.1
Ca_18056_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 6.3e-56 223.4 166 61.4
Cpa.g.sc43.17 Carica papaya HOM05D004097 ORTHO05D116738 4.7e-51 207.2 100 89.0
Cpa.g.sc43.13 Carica papaya HOM05D004097 ORTHO05D005352 2.2e-48 198.4 161 59.6
TWI36G0648 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 3.2e-44 184.5 100 81.0
PSO724G1248 Papaver somniferum HOM05D004097 ORTHO05D005352 3.7e-40 171.0 149 55.7
Oeu036881.1 Olea europaea HOM05D004097 ORTHO05D005352 1.0e-37 162.9 93 76.3
CAN.G49.23 Capsicum annuum HOM05D004097 ORTHO05D005352 2.4e-31 141.7 82 74.4
Solyc05g015250.2 Solanum lycopersicum HOM05D004097 ORTHO05D036916 5.5e-28 130.6 125 56.8
RcHm_v2.0_Chr7g0216361 Rosa chinensis HOM05D004097 ORTHO05D005352 9.5e-28 129.8 96 66.7
CAN.G49.22 Capsicum annuum HOM05D004097 ORTHO05D043419 4.4e-25 120.9 85 67.1
Actinidia15017 Actinidia chinensis HOM05D004097 ORTHO05D055553 1.1e-23 116.3 95 64.2
Actinidia15018 Actinidia chinensis HOM05D004097 ORTHO05D054282 3.5e-22 111.3 84 64.3
Cpa.g.sc43.15 Carica papaya HOM05D004097 ORTHO05D043419 2.3e-21 108.6 69 72.5
Peaxi162Scf00128g01139 Petunia axillaris HOM05D004097 ORTHO05D036916 1.9e-20 105.5 70 71.4
Psat3g154560 Pisum sativum HOM05D001399 ORTHO05D001670 7.3e-20 103.6 84 54.8
TAR624G1259 Trochodendron aralioides HOM05D000428 ORTHO05D009311 3.2e-15 88.2 41 90.2
TAR626G1714 Trochodendron aralioides HOM05D000428 ORTHO05D009311 9.2e-15 86.7 40 92.5
Actinidia15016 Actinidia chinensis HOM05D004097 ORTHO05D005352 3.3e-12 78.2 41 82.9
MBI03_g17125_MAGBIO Magnolia biondii HOM05D000089 ORTHO05D000104 4.3e-12 77.8 49 79.6
Psat7g044200 Pisum sativum HOM05D003089 ORTHO05D003544 2.1e-11 75.5 59 55.9
BcaB07g33265 Brassica carinata HOM05D004070 ORTHO05D032257 2.8e-11 75.1 96 43.8
BcaB07g33267 Brassica carinata HOM05D004070 ORTHO05D032257 3.6e-11 74.7 95 44.2
TPR.G36369 Trifolium pratense HOM05D004097 ORTHO05D001670 2.3e-10 72.0 70 51.4


User provided reference genes

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