Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 0.0e+00 1382.5 756 100.0
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 6.3e-252 874.4 787 68.9
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 2.0e-237 826.2 650 72.6
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 4.7e-231 805.1 792 64.3
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 1.3e-225 786.9 782 63.8
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 1.1e-224 783.9 787 63.5
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 4.3e-224 781.9 793 65.4
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 9.6e-224 780.8 787 62.8
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 3.6e-223 778.9 764 64.7
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.6e-218 763.5 789 63.8
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 1.9e-216 756.5 785 61.8
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 6.9e-214 748.0 790 61.3
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 1.5e-213 746.9 702 69.1
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 3.4e-213 745.7 801 61.3
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 6.6e-209 731.5 785 61.0
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 5.6e-208 728.4 786 60.3
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 8.7e-201 704.5 781 59.5
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 1.6e-199 700.3 792 58.1
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 1.6e-199 700.3 782 60.4
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 1.0e-196 691.0 790 58.6
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 2.5e-195 686.4 782 59.1
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 5.1e-193 678.7 789 58.6
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 8.7e-193 677.9 792 57.7
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 7.4e-192 674.9 790 58.0
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 9.6e-192 674.5 791 58.4
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.1e-191 673.3 783 57.6
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.7e-191 672.5 783 57.1
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.7e-191 672.5 782 57.0
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 8.2e-191 671.4 785 57.5
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 8.2e-191 671.4 788 56.9
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 1.1e-190 671.0 782 57.0
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 2.6e-189 666.4 815 52.0
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 1.1e-187 661.0 803 55.7
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.5e-184 650.6 783 56.6
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 9.7e-184 647.9 787 56.2
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 1.3e-180 637.5 790 56.2
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 2.9e-180 636.3 792 57.4
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 6.5e-180 635.2 800 54.6
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 6.9e-174 615.1 779 55.6
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 2.9e-172 609.8 802 52.9
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 7.2e-171 605.1 770 53.9
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 2.7e-170 603.2 781 53.6
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 3.6e-170 602.8 780 53.8
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 3.9e-169 599.4 780 53.6
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 3.9e-169 599.4 782 53.8
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 5.7e-168 595.5 783 53.8
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 1.3e-167 594.3 792 53.5
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.3e-164 584.3 751 55.1
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 1.1e-163 581.3 802 49.8
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 3.2e-163 579.7 796 52.8
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 2.1e-162 577.0 751 54.1
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 4.7e-162 575.9 805 51.7
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 6.1e-162 575.5 797 53.3
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 1.1e-160 571.2 777 52.8
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.1e-160 571.2 778 53.1
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 5.7e-160 568.9 775 52.3
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 5.7e-160 568.9 770 53.1
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 7.4e-160 568.5 764 53.7
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 4.8e-159 565.8 802 50.9
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 1.8e-158 563.9 783 51.9
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 5.0e-156 555.8 770 52.1
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 6.1e-154 548.9 862 49.7
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 4.4e-152 542.7 778 51.2
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 7.0e-150 535.4 769 52.4
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 1.4e-142 511.1 760 50.5
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 1.2e-141 508.1 767 49.7
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 2.7e-141 506.9 778 47.4
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 2.9e-140 503.4 782 48.1
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 1.5e-139 501.1 756 48.7
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 1.7e-135 487.6 761 47.7
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 8.3e-135 485.3 823 41.3
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 1.8e-134 484.2 447 68.5
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 9.2e-134 481.9 784 49.2
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 2.7e-133 480.3 622 50.3
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 3.9e-132 476.5 786 48.1
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 1.4e-129 468.0 745 48.3
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 2.3e-129 467.2 787 45.1
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 5.2e-129 466.1 662 48.3
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 1.2e-128 464.9 787 45.0
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 1.3e-127 461.5 789 46.4
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 1.3e-127 461.5 900 42.8
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 1.1e-126 458.4 782 45.5
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 6.0e-125 452.6 703 47.2
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 1.0e-124 451.8 731 46.1
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 5.0e-124 449.5 780 45.6
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 6.6e-124 449.1 744 44.5
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 6.6e-124 449.1 744 44.5
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 3.3e-123 446.8 791 44.9
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 7.3e-123 445.7 632 45.9
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 9.5e-123 445.3 703 46.5
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 3.4e-120 436.8 804 44.2
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 3.4e-120 436.8 610 46.6
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 2.9e-119 433.7 771 44.7
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.1e-118 431.8 454 56.8
Manes.18G083000 Manihot esculenta HOM05D000237 ORTHO05D006530 4.1e-118 429.9 513 51.7
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 3.9e-116 423.3 769 45.9
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.9e-115 421.0 774 46.5
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 4.3e-115 419.9 752 45.2
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 2.9e-111 407.1 504 56.2
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 9.2e-110 402.1 762 43.6
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 1.7e-108 397.9 709 47.2
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 3.6e-106 390.2 629 44.5
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 6.2e-98 362.8 795 40.9
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 1.2e-96 358.6 721 42.4
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 1.4e-94 351.7 650 41.1
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 4.2e-94 350.1 777 40.3
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 9.6e-91 339.0 787 39.1
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.3e-84 318.5 721 41.2
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 3.1e-81 307.4 596 38.4
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 8.4e-71 272.7 344 55.8
PGSC0003DMG401025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 2.5e-70 271.2 477 43.6
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 4.2e-70 270.4 799 38.2
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 2.8e-66 257.7 259 54.1
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 1.7e-55 221.9 212 69.8
vmacro21124 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 5.0e-55 220.3 342 45.3
AUR62007706 Chenopodium quinoa HOM05D000237 ORTHO05D006530 3.0e-52 211.1 445 37.8
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 7.4e-51 206.5 775 29.5
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 8.5e-47 193.0 604 37.3
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 3.7e-42 177.6 505 33.3
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 7.7e-40 169.9 228 45.2
Cpa.g.sc1156.5 Carica papaya HOM05D000237 ORTHO05D006530 9.4e-38 162.9 327 39.4
Oeu045950.1 Olea europaea HOM05D000237 ORTHO05D006530 1.8e-36 158.7 279 42.3
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 4.0e-36 157.5 141 61.7
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 8.8e-36 156.4 732 32.7
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 8.3e-34 149.8 220 44.1
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 2.5e-30 138.3 101 70.3
Lj4P681T20 Lonicera japonica HOM05D000237 ORTHO05D006530 8.8e-28 129.8 140 55.7
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 5.4e-25 120.6 98 63.3
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 5.0e-23 114.0 101 57.4
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 6.6e-23 113.6 167 63.5
Oeu030983.1 Olea europaea HOM05D000237 ORTHO05D006530 1.0e-20 106.3 103 63.1
Oeu047172.1 Olea europaea HOM05D000237 ORTHO05D006530 1.8e-20 105.5 245 34.3
Sc20g0002720 Simmondsia chinensis HOM05D000237 ORTHO05D006530 2.0e-19 102.1 119 52.1
ATR0172G001 Amborella trichopoda HOM05D000237 ORTHO05D006530 1.4e-12 79.3 98 43.9
SEGI_15365 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 1.3e-10 72.8 398 28.1
Oeu047175.1 Olea europaea HOM05D000237 ORTHO05D006530 5.6e-06 57.4 101 33.7


User provided reference genes

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