Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 7.9e-278 959.9 522 100.0
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 2.0e-151 540.0 397 77.3
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 2.2e-134 483.4 474 61.2
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.7e-131 473.8 466 61.6
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.2e-129 467.6 473 61.1
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 5.4e-117 425.6 469 54.8
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 2.0e-116 423.7 470 53.6
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 6.0e-116 422.2 478 53.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.2e-113 414.5 473 56.2
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.1e-112 411.4 471 52.2
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 1.2e-111 407.9 470 51.7
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 3.2e-109 399.8 468 51.3
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 1.0e-107 394.8 473 52.4
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 6.6e-107 392.1 473 50.1
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 3.1e-104 383.3 459 51.0
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 9.9e-103 378.3 476 51.1
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 1.3e-102 377.9 470 51.7
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 9.2e-101 371.7 471 49.0
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 5.6e-98 362.5 473 48.8
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 9.5e-98 361.7 475 48.0
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 4.0e-96 356.3 495 47.5
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 3.4e-95 353.2 475 47.8
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 7.6e-95 352.1 475 47.6
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 5.4e-93 345.9 472 51.1
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.0e-92 342.4 475 49.1
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 2.1e-89 334.0 410 49.3
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 4.4e-87 326.2 373 54.4
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.6e-84 317.8 471 48.2
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 6.6e-83 312.4 472 46.6
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.3e-81 308.1 471 44.8
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.6e-81 307.8 494 46.0
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 3.1e-80 303.5 471 43.9
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.2e-76 291.6 465 44.7
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.6e-76 291.2 470 44.9
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 4.6e-76 289.7 477 41.7
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.8e-72 277.7 472 43.2
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 5.3e-72 276.2 381 48.6
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 5.3e-72 276.2 474 43.5
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.0e-70 271.9 472 40.7
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.6e-65 254.6 478 38.1
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.1e-65 254.2 473 40.4
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.6e-63 247.3 467 41.3
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 8.4e-62 242.3 475 39.8
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 3.5e-60 236.9 455 39.6
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 4.6e-60 236.5 463 40.8
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 5.7e-58 229.6 478 37.7
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 9.7e-58 228.8 444 38.7
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 2.8e-57 227.3 470 36.2
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 6.3e-57 226.1 464 39.0
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 2.2e-54 217.6 523 33.8
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 5.0e-54 216.5 462 35.7
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.2e-53 213.8 464 34.9
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 8.8e-51 205.7 468 36.3
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 4.3e-50 203.4 337 43.0
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 8.2e-49 199.1 442 34.8
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 4.1e-48 196.8 214 55.6
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 4.1e-48 196.8 357 41.5
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 5.9e-47 193.0 346 42.2
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.5e-46 189.1 475 34.5
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 8.5e-46 189.1 466 35.2
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.1e-45 188.7 412 36.4
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 1.4e-45 188.3 475 34.9
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.4e-45 188.3 472 35.8
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.2e-44 185.3 468 34.2
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 6.1e-44 183.0 487 33.9
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 6.7e-43 179.5 463 35.4
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.1e-40 172.2 463 32.6
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 5.0e-38 163.3 463 33.5
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 1.1e-37 162.2 460 32.0
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 5.7e-34 149.8 469 31.3
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 4.8e-33 146.7 475 30.5
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.1e-32 145.6 296 38.5
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 2.0e-31 141.4 294 35.0
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.5e-31 140.2 475 30.1
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 5.9e-31 139.8 473 31.5
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 7.7e-31 139.4 385 31.7
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 3.8e-30 137.1 281 37.4
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 1.8e-27 128.3 460 30.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 4.0e-27 127.1 171 47.4
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 8.8e-27 125.9 84 78.6
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 2.6e-26 124.4 284 39.8
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 6.3e-25 119.8 467 28.3
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 1.4e-24 118.6 241 39.0
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.4e-24 118.6 476 28.2
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 9.1e-24 115.9 243 37.0
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 4.2e-21 107.1 259 36.7
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.2e-20 105.5 438 26.7
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 2.7e-20 104.4 464 28.2
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.7e-20 104.4 417 29.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 6.1e-20 103.2 464 28.0
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.1e-20 103.2 209 36.8
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.0e-19 102.4 474 27.6
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.0e-19 102.4 474 27.6
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 5.2e-19 100.1 462 27.7
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.2e-18 99.0 297 32.3
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 7.5e-18 96.3 473 26.6
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 2.4e-16 91.3 357 30.0
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 3.8e-14 84.0 235 31.5
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.0e-11 75.9 164 36.6
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 3.0e-11 74.3 178 34.3
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 6.8e-11 73.2 212 32.5
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 6.8e-11 73.2 234 26.5
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 2.6e-10 71.2 142 38.7
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.3e-09 68.9 91 42.9
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-07 62.0 483 24.2
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 5.9e-07 60.1 291 27.5
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 7.8e-07 59.7 173 28.9
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.0e-06 59.3 272 30.1
QL04p005401 Quercus lobata HOM05D000011 ORTHO05D000157 2.9e-06 57.8 106 36.8
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 2.9e-06 57.8 158 36.7
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 3.9e-06 57.4 188 33.5


User provided reference genes

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