Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 1.3e-202 709.5 355 100.0
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 3.9e-127 458.8 312 75.0
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.3e-125 453.8 312 74.0
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 6.2e-117 424.9 311 69.5
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 6.2e-117 424.9 313 69.3
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 7.1e-113 411.4 311 68.5
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 3.3e-110 402.5 312 65.7
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 4.8e-109 398.7 303 66.7
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 9.0e-108 394.4 312 64.7
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 2.6e-107 392.9 313 64.9
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 2.6e-107 392.9 313 65.2
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 6.5e-106 388.3 311 66.6
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 1.1e-105 387.5 312 64.4
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 3.6e-104 382.5 313 62.3
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 1.4e-103 380.6 316 63.3
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 1.1e-102 377.5 315 63.5
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 1.5e-102 377.1 313 62.9
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 7.4e-102 374.8 392 54.6
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 1.3e-101 374.0 316 62.3
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 3.7e-101 372.5 311 60.8
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 3.7e-101 372.5 311 62.4
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 3.4e-99 365.9 313 61.0
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 1.0e-98 364.4 314 61.5
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 1.0e-98 364.4 314 62.1
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 6.5e-98 361.7 312 60.6
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 3.6e-96 355.9 313 59.4
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 7.9e-96 354.8 312 59.6
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.3e-95 353.2 313 62.0
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 3.9e-95 352.4 304 62.8
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 1.5e-94 350.5 312 59.0
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 4.4e-94 349.0 312 59.9
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 7.4e-94 348.2 311 59.2
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.3e-93 347.4 312 59.6
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 8.2e-93 344.7 312 60.9
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 1.8e-92 343.6 312 57.4
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.8e-92 343.6 313 58.5
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 1.8e-92 343.6 311 58.5
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 2.4e-92 343.2 313 58.5
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 2.4e-92 343.2 312 57.7
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 3.1e-92 342.8 313 60.7
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 4.1e-92 342.4 313 58.1
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 5.3e-92 342.0 311 59.2
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 5.3e-92 342.0 314 57.6
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 2.0e-91 340.1 314 59.2
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 2.6e-91 339.7 311 58.8
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 2.6e-91 339.7 313 59.7
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 3.5e-91 339.3 311 59.2
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 5.9e-91 338.6 312 59.9
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 5.9e-91 338.6 312 57.7
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 1.7e-90 337.0 311 56.6
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 1.7e-90 337.0 313 58.1
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 2.2e-90 336.7 313 59.4
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 2.9e-90 336.3 313 57.5
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 2.9e-90 336.3 312 59.6
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 1.5e-89 334.0 311 59.5
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 1.9e-89 333.6 311 57.2
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 5.5e-89 332.0 312 59.6
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 5.5e-89 332.0 312 59.6
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 1.2e-88 330.9 307 57.7
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 2.1e-88 330.1 311 57.6
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 2.7e-88 329.7 307 57.3
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 4.7e-88 328.9 317 56.2
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 4.4e-86 322.4 312 56.4
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 2.2e-85 320.1 303 56.8
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 2.2e-85 320.1 311 59.5
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 1.8e-84 317.0 312 56.7
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 3.1e-84 316.2 303 55.1
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 4.5e-83 312.4 242 64.5
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 1.7e-82 310.5 259 62.9
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 2.2e-82 310.1 316 54.7
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 2.2e-82 310.1 315 55.6
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 5.0e-82 308.9 400 46.2
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 1.5e-81 307.4 261 62.5
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.6e-80 303.9 338 50.6
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 1.8e-79 300.4 318 52.8
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 4.0e-79 299.3 349 49.0
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 8.8e-79 298.1 311 55.6
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 2.7e-75 286.6 301 53.5
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 2.0e-70 270.4 311 50.8
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 4.4e-70 269.2 311 49.2
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 4.8e-69 265.8 266 55.3
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 4.2e-65 252.7 316 48.1
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 5.2e-63 245.7 312 47.4
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 5.0e-58 229.2 309 43.4
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.8e-56 223.4 318 42.1
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 8.0e-56 221.9 313 42.5
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 3.1e-55 219.9 204 57.8
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.5e-54 217.6 186 61.3
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 1.1e-52 211.5 149 67.1
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 1.9e-52 210.7 155 65.2
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 3.2e-52 209.9 326 39.6
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 9.2e-52 208.4 149 67.8
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.0e-51 207.2 151 66.2
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.8e-48 196.8 144 66.0
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 7.1e-44 182.2 134 61.9
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 5.1e-42 176.0 146 67.1
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 1.1e-36 158.3 320 34.4
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 7.1e-36 155.6 316 31.3
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 1.6e-35 154.5 107 70.1
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 4.6e-35 152.9 307 33.6
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 5.6e-33 146.0 326 33.4
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 3.1e-31 140.2 158 52.5
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 8.9e-31 138.7 143 58.0
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 2.9e-29 133.7 106 63.2
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.4e-28 131.3 166 46.4
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.2e-27 128.3 150 48.7
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 1.3e-24 118.2 74 68.9
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 4.0e-23 113.2 56 89.3
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 6.9e-23 112.5 142 45.8
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 9.3e-20 102.1 339 27.1
CiPaw.07G064900 Carya illinoinensis HOM05D005810 ORTHO05D007279 1.9e-09 67.8 36 94.4
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 7.6e-06 55.8 27 88.9
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 7.6e-06 55.8 27 88.9


User provided reference genes

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