Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 1.9e-131 472.6 233 100.0
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.8e-98 362.5 236 78.4
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 8.1e-98 360.9 222 81.1
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 9.3e-94 347.4 233 77.3
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.3e-92 342.8 181 92.3
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 5.1e-92 341.7 236 76.7
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 5.1e-92 341.7 232 78.9
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 1.1e-91 340.5 229 78.2
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 4.3e-91 338.6 225 77.3
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 4.3e-91 338.6 239 75.3
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 1.3e-90 337.0 245 73.1
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.6e-90 336.7 234 74.4
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 2.1e-90 336.3 244 72.5
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.1e-90 336.3 244 72.5
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.7e-90 335.5 244 72.1
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 4.8e-90 335.1 248 71.0
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 1.1e-89 334.0 242 72.7
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.1e-89 334.0 233 74.2
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 1.4e-89 333.6 233 73.8
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.8e-89 333.2 225 75.6
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.2e-88 330.5 240 72.9
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 1.2e-88 330.5 233 73.4
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.0e-88 329.7 244 70.1
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 2.6e-88 329.3 239 73.2
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 3.4e-88 328.9 243 71.6
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.4e-88 328.9 247 72.1
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 3.4e-88 328.9 233 73.8
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 4.5e-88 328.6 246 69.5
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.5e-88 328.6 241 72.6
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 4.5e-88 328.6 233 73.0
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 7.6e-88 327.8 244 70.1
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 9.9e-88 327.4 239 72.4
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 1.3e-87 327.0 239 72.0
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 1.7e-87 326.6 241 73.9
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 2.2e-87 326.2 231 73.2
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 4.9e-87 325.1 243 71.2
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 4.9e-87 325.1 243 71.2
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 4.9e-87 325.1 232 71.1
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 6.4e-87 324.7 209 80.4
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 6.4e-87 324.7 223 74.4
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 6.4e-87 324.7 242 71.9
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 1.4e-86 323.6 226 73.5
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.4e-86 323.6 254 68.9
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 1.4e-86 323.6 233 71.2
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.9e-86 323.2 244 69.3
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 2.4e-86 322.8 230 74.8
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 4.2e-86 322.0 222 71.2
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 5.5e-86 321.6 229 72.9
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 5.5e-86 321.6 229 70.7
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 5.5e-86 321.6 228 74.1
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 1.6e-85 320.1 241 68.9
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.6e-85 320.1 278 63.7
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 2.7e-85 319.3 259 66.8
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 3.5e-85 318.9 238 71.0
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 6.0e-85 318.2 230 71.7
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 7.9e-85 317.8 225 72.0
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 1.0e-84 317.4 228 71.1
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.0e-84 317.4 236 70.8
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 1.0e-84 317.4 234 73.1
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 1.3e-84 317.0 233 68.7
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.3e-84 317.0 225 71.6
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.3e-84 317.0 225 71.6
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.3e-84 317.0 225 71.6
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 2.3e-84 316.2 227 71.4
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 2.3e-84 316.2 227 74.4
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 3.0e-84 315.8 225 71.1
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.0e-84 315.8 227 70.9
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 3.0e-84 315.8 225 72.9
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 3.0e-84 315.8 225 71.1
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 3.9e-84 315.5 231 72.7
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 3.9e-84 315.5 225 72.4
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 5.1e-84 315.1 240 67.1
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 6.7e-84 314.7 246 69.5
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 6.7e-84 314.7 237 72.2
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 8.7e-84 314.3 232 73.7
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 1.1e-83 313.9 226 71.7
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.1e-83 313.9 231 72.7
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.5e-83 313.5 231 72.7
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 2.5e-83 312.8 189 81.5
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 4.3e-83 312.0 231 72.3
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 7.4e-83 311.2 225 71.6
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 7.4e-83 311.2 231 72.3
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 1.6e-82 310.1 229 69.9
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.6e-82 310.1 237 71.3
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 2.4e-81 306.2 202 77.7
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 5.3e-81 305.1 232 69.8
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 6.9e-81 304.7 246 68.7
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 9.0e-81 304.3 236 66.9
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 4.5e-80 302.0 226 70.8
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 7.6e-80 301.2 235 69.8
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 2.9e-79 299.3 235 66.8
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 2.9e-79 299.3 270 61.5
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 4.9e-79 298.5 227 67.4
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 2.5e-78 296.2 231 70.1
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 7.9e-77 291.2 221 66.1
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 7.9e-77 291.2 227 65.6
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 3.0e-76 289.3 183 77.6
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 5.1e-76 288.5 227 65.6
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 2.5e-75 286.2 174 82.2
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 1.3e-74 283.9 258 58.5
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 5.5e-70 268.5 139 93.5
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 3.6e-69 265.8 180 73.9
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 1.8e-65 253.4 187 69.5
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 1.5e-64 250.4 188 69.1
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 1.1e-57 227.6 197 59.4
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 4.1e-57 225.7 122 88.5
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 9.4e-54 214.5 109 94.5
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 4.4e-51 205.7 186 60.8
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 8.5e-47 191.4 183 56.3
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 7.2e-46 188.3 198 50.0
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 4.7e-45 185.7 192 53.1
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.3e-44 183.3 105 84.8
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 6.5e-39 165.2 211 46.0
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 3.4e-35 152.9 123 56.1
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 7.0e-33 145.2 106 69.8
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 7.7e-32 141.7 105 69.5
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 3.8e-31 139.4 182 45.6
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 2.8e-29 133.3 71 88.7
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 1.0e-23 114.8 61 86.9
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 2.3e-23 113.6 80 73.8
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.1e-21 107.1 91 68.1
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 2.0e-19 100.5 54 87.0
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 5.8e-19 99.0 110 57.3
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 5.8e-19 99.0 181 37.6
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 9.2e-17 91.7 119 50.4
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 4.6e-16 89.4 85 58.8
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 3.9e-15 86.3 44 93.2
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 1.5e-14 84.3 106 50.9
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 1.7e-10 70.9 68 57.4
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea HOM05D002734 ORTHO05D003035 4.6e-08 62.8 45 71.1


User provided reference genes

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