Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13190 Davidia involucrata HOM05D000091 ORTHO05D018275 2.7e-61 238.8 153 100.0
Dinv21907 Davidia involucrata HOM05D000091 ORTHO05D009480 3.6e-37 158.7 125 88.8
Hma1.2p1_0308F.1_g120200 Hydrangea macrophylla HOM05D000091 ORTHO05D009480 9.8e-27 124.0 125 77.6
Lj4C891G12 Lonicera japonica HOM05D000091 ORTHO05D018275 2.7e-24 115.9 117 76.9
Potri.007G093000 Populus trichocarpa HOM05D000091 ORTHO05D009480 3.0e-23 112.5 125 66.4
Actinidia28863 Actinidia chinensis HOM05D000091 ORTHO05D009480 2.1e-21 106.3 126 47.6
TAR381G0295 Trochodendron aralioides HOM05D000091 ORTHO05D009480 3.6e-21 105.5 125 68.8
Sabra07G0077100 Salix brachista HOM05D000091 ORTHO05D009480 6.8e-20 101.3 125 61.6
Rhsim08G0010600 Rhododendron simsii HOM05D000091 ORTHO05D009480 8.9e-20 100.9 145 58.6
Duzib264G1100 Durio zibethinus HOM05D000091 ORTHO05D009480 2.0e-19 99.8 125 63.2
Manes.12G134700 Manihot esculenta HOM05D000091 ORTHO05D009480 3.4e-19 99.0 125 68.8
DCAR_010086 Daucus carota HOM05D000091 ORTHO05D009480 1.3e-18 97.1 125 58.4
CSS0047599 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D009480 3.7e-18 95.5 125 65.6
Atru.chr4.62 Acer truncatum HOM05D000091 ORTHO05D009480 2.4e-17 92.8 125 64.0
Cfa002660 Carpinus fangiana HOM05D000091 ORTHO05D009480 3.2e-17 92.4 125 48.0
ClCG10G008990 Citrullus lanatus HOM05D000091 ORTHO05D009480 1.2e-16 90.5 125 63.2
Potri.005G075400 Populus trichocarpa HOM05D000091 ORTHO05D009480 2.1e-16 89.7 125 60.8
Actinidia28232 Actinidia chinensis HOM05D000091 ORTHO05D009480 4.6e-16 88.6 128 59.4
COL.COLO4_09966 Corchorus olitorius HOM05D000091 ORTHO05D009480 4.6e-16 88.6 127 60.6
Migut.H02359 Erythranthe guttata HOM05D000091 ORTHO05D009480 1.3e-15 87.0 125 40.8
Oeu056608.1 Olea europaea HOM05D000091 ORTHO05D009480 1.3e-15 87.0 125 61.6
Nitab4.5_0012380g0010 Nicotiana tabacum HOM05D000091 ORTHO05D009480 1.7e-15 86.7 125 64.8
Haze_24930 Corylus avellana HOM05D000091 ORTHO05D009480 3.9e-15 85.5 116 45.7
CsaV3_4G008870 Cucumis sativus L. HOM05D000091 ORTHO05D009480 3.9e-15 85.5 125 62.4
Nitab4.5_0000104g0010 Nicotiana tabacum HOM05D000091 ORTHO05D009480 3.9e-15 85.5 125 66.4
TWI74G1043 Tripterygium wilfordii HOM05D000091 ORTHO05D009480 3.9e-15 85.5 125 58.4
Gohir.A02G143200 Gossypium hirsutum HOM05D000091 ORTHO05D009480 5.1e-15 85.1 125 60.0
Gohir.D03G037300 Gossypium hirsutum HOM05D000091 ORTHO05D009480 5.1e-15 85.1 125 60.0
Ciclev10025174m.g Citrus clementina HOM05D000091 ORTHO05D009480 8.6e-15 84.3 123 61.0
Cfa002661 Carpinus fangiana HOM05D000091 ORTHO05D009480 1.5e-14 83.6 116 45.7
Peaxi162Scf00295g01020 Petunia axillaris HOM05D000091 ORTHO05D009480 1.5e-14 83.6 122 61.5
AUR62003795 Chenopodium quinoa HOM05D000091 ORTHO05D009480 5.6e-14 81.6 123 55.3
MELO3C018952.2 Cucumis melo HOM05D000091 ORTHO05D009480 5.6e-14 81.6 125 62.4
Duzib147G1469 Durio zibethinus HOM05D000091 ORTHO05D009480 7.3e-14 81.3 125 57.6
Nn2g14514 Nelumbo nucifera HOM05D000091 ORTHO05D018275 9.5e-14 80.9 125 59.2
CiPaw.03G142000 Carya illinoinensis HOM05D000091 ORTHO05D009480 1.2e-13 80.5 125 44.0
Thecc.01G101300 Theobroma cacao HOM05D000091 ORTHO05D009480 1.2e-13 80.5 125 60.8
Prupe.6G187200 Prunus persica HOM05D000091 ORTHO05D009480 2.1e-13 79.7 125 61.6
Nitab4.5_0006967g0060 Nicotiana tabacum HOM05D000091 ORTHO05D009480 2.8e-13 79.3 126 64.3
AUR62002007 Chenopodium quinoa HOM05D000091 ORTHO05D009480 6.2e-13 78.2 126 54.0
Nitab4.5_0000715g0010 Nicotiana tabacum HOM05D000091 ORTHO05D009480 1.1e-12 77.4 125 60.8
SalBow3G1883 Salvia bowleyana HOM05D000091 ORTHO05D009480 1.8e-12 76.6 126 41.3
Solyc05g051580.3 Solanum lycopersicum HOM05D000091 ORTHO05D009480 5.2e-12 75.1 125 61.6
PGSC0003DMG400007239 Solanum tuberosum HOM05D000091 ORTHO05D009480 8.9e-12 74.3 128 59.4
Lj4g0017476 Lotus japonicus HOM05D000091 ORTHO05D009480 1.2e-11 73.9 129 59.7
Sopen05g030030 Solanum pennellii HOM05D000091 ORTHO05D009480 1.2e-11 73.9 125 60.8
CAN.G151.29 Capsicum annuum HOM05D000091 ORTHO05D009480 1.5e-11 73.6 125 61.6
MD15G1323900 Malus domestica HOM05D000091 ORTHO05D009480 2.0e-11 73.2 126 59.5
QL01p007305 Quercus lobata HOM05D000091 ORTHO05D009480 2.6e-11 72.8 124 58.9
Cc07_g15190 Coffea canephora HOM05D000091 ORTHO05D009480 4.4e-11 72.0 125 57.6
ECA246G2555 Erigeron canadensis HOM05D000091 ORTHO05D009480 4.4e-11 72.0 125 36.0
VMungo0251G3306 Vigna mungo HOM05D000091 ORTHO05D009480 9.9e-11 70.9 128 58.6
RcHm_v2.0_Chr2g0113481 Rosa chinensis HOM05D000091 ORTHO05D009480 1.3e-10 70.5 125 57.6
arahy.Tifrunner.gnm1.ann1.IPHF02 Arachis hypogaea HOM05D000091 ORTHO05D009480 3.8e-10 68.9 128 51.6
Lalb_Chr13g0295971 Lupinus albus HOM05D000091 ORTHO05D009480 4.9e-10 68.6 129 59.7
MBI05_g19352_MAGBIO Magnolia biondii HOM05D000091 ORTHO05D009480 4.9e-10 68.6 128 58.6
Sc16g0005020 Simmondsia chinensis HOM05D000091 ORTHO05D018275 4.9e-10 68.6 55 54.5
Aqoxy6G00795 Aquilegia oxysepala HOM05D000091 ORTHO05D009480 6.4e-10 68.2 125 36.8
arahy.Tifrunner.gnm1.ann1.GKWH5W Arachis hypogaea HOM05D000091 ORTHO05D009480 6.4e-10 68.2 128 53.9
CANSAT01G0345 Cannabis sativa HOM05D000091 ORTHO05D009480 6.4e-10 68.2 129 54.3
Glyma.08G135600 Glycine max HOM05D000091 ORTHO05D009480 6.4e-10 68.2 128 53.9
Phvul.002G256200 Phaseolus vulgaris HOM05D000091 ORTHO05D009480 6.4e-10 68.2 128 54.7
Sc20g0005860 Simmondsia chinensis HOM05D000091 ORTHO05D018275 6.4e-10 68.2 91 65.9
Eucgr.I00433 Eucalyptus grandis HOM05D000091 ORTHO05D009480 1.9e-09 66.6 125 57.6
FAN26G2447 Fragaria x ananassa HOM05D000091 ORTHO05D009480 1.9e-09 66.6 125 59.2
EL10Ac6g15106 Beta vulgaris HOM05D000091 ORTHO05D009480 2.4e-09 66.2 123 42.3
Lsat_1_v5_gn_5_48701 Lactuca sativa HOM05D000091 ORTHO05D009480 2.4e-09 66.2 132 33.3
QL06p049508 Quercus lobata HOM05D000091 ORTHO05D009480 2.4e-09 66.2 54 61.1
MSTRG.23343 Avicennia marina HOM05D000091 ORTHO05D009480 4.1e-09 65.5 54 59.3
FAN23G1696 Fragaria x ananassa HOM05D000091 ORTHO05D009480 5.4e-09 65.1 125 59.2
CiPaw.04G099600 Carya illinoinensis HOM05D000091 ORTHO05D009480 3.5e-08 62.4 125 61.6
Medtr8g090220 Medicago truncatula HOM05D000091 ORTHO05D009480 3.5e-08 62.4 130 53.8
Cpa.g.sc974.2 Carica papaya HOM05D000091 ORTHO05D018275 4.6e-08 62.0 125 58.4
Ca_17738_v3 Cicer arietinum L. HOM05D000091 ORTHO05D009480 6.0e-08 61.6 131 36.6
ATR0782G015 Amborella trichopoda HOM05D000091 ORTHO05D009480 1.7e-07 60.1 135 52.6
TPR.G6248 Trifolium pratense HOM05D000091 ORTHO05D009480 6.6e-07 58.2 130 54.6
FAN28G1202 Fragaria x ananassa HOM05D000091 ORTHO05D009480 2.5e-06 56.2 125 56.0
HanXRQChr15g0469851 Helianthus annuus HOM05D000091 ORTHO05D009480 2.5e-06 56.2 130 32.3
Psat7g054720 Pisum sativum HOM05D000091 ORTHO05D009480 2.5e-06 56.2 117 44.4
PSO781G0217 Papaver somniferum HOM05D000091 ORTHO05D009480 3.3e-06 55.8 125 35.2
FAN19G0834 Fragaria x ananassa HOM05D000091 ORTHO05D009480 4.3e-06 55.5 118 57.6


User provided reference genes

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