Gene: Sopen05g030030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g030030
  • Transcript Identifier Sopen05g030030.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 73792899-73798242 : positive

Gene Family Information

  • ID HOM05D000091
  • #Genes/#Species 3486/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g030030.1

Descriptions

  • Description Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves. | DEFECTIVELY ORGANIZED TRIBUTARIES 3 (DOT3) | FUNCTIONS IN: signal transducer activity | INVOLVED IN: in 6 processes | LOCATED IN: cellular_component unknown | EXPRESSED IN: leaf primordium | CONTAINS InterPro DOMAIN/s: NPH3 , BTB/POZ fold , BTB/POZ-like | BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT5G10250
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT5G10250
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT5G10250
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT5G10250
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT5G10250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043454 NPH3/RPT2-like family
IPR000210 BTB/POZ domain
IPR011333 SKP1/BTB/POZ domain superfamily
IPR027356 NPH3 domain
Mapman id Description
35.1 not assigned.annotated