Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13082 Davidia involucrata HOM05D001432 ORTHO05D010375 6.1e-146 520.8 260 100.0
Dinv13089 Davidia involucrata HOM05D000455 ORTHO05D000434 7.5e-27 125.2 222 45.0
Dinv13090 Davidia involucrata HOM05D000455 ORTHO05D010375 1.3e-10 71.2 42 83.3
Dinv24846 Davidia involucrata HOM05D000455 ORTHO05D000434 3.7e-10 69.7 266 31.2
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 8.3e-10 68.6 246 32.1
Dinv10489 Davidia involucrata HOM05D000455 ORTHO05D000434 3.2e-09 66.6 53 66.0
Dinv14328 Davidia involucrata HOM05D001432 ORTHO05D002371 1.6e-08 64.3 35 74.3
Dinv44777 Davidia involucrata HOM05D001432 ORTHO05D002371 1.6e-08 64.3 37 75.7
Dinv24847 Davidia involucrata HOM05D000455 ORTHO05D000434 2.1e-08 63.9 122 42.6
Cc10_g07160 Coffea canephora HOM05D001432 ORTHO05D002371 1.3e-07 61.2 47 57.4
Actinidia37031 Actinidia chinensis HOM05D001432 ORTHO05D002371 2.3e-07 60.5 34 76.5
CAN.G101.4 Capsicum annuum HOM05D001432 ORTHO05D002371 2.3e-07 60.5 37 67.6
Nn5g30092 Nelumbo nucifera HOM05D001432 ORTHO05D002371 2.3e-07 60.5 33 78.8
Peaxi162Scf00392g00518 Petunia axillaris HOM05D001432 ORTHO05D002371 2.3e-07 60.5 37 70.3
Rhsim07G0202900 Rhododendron simsii HOM05D001432 ORTHO05D002371 3.0e-07 60.1 37 67.6
Solyc04g074180.4 Solanum lycopersicum HOM05D001432 ORTHO05D002371 3.0e-07 60.1 37 67.6
Sopen04g029360 Solanum pennellii HOM05D001432 ORTHO05D002371 3.0e-07 60.1 37 67.6
TAR375G0327 Trochodendron aralioides HOM05D000455 ORTHO05D000434 3.0e-07 60.1 61 59.0
vmacro04744 Vaccinium macrocarpon HOM05D001432 ORTHO05D002371 3.0e-07 60.1 37 67.6
ATR0505G001 Amborella trichopoda HOM05D001432 ORTHO05D002371 5.0e-07 59.3 33 72.7
CSS0017979 Camellia sinensis var. sinensis HOM05D001432 ORTHO05D002371 5.0e-07 59.3 35 71.4
CANSAT25G3454 Cannabis sativa HOM05D001432 ORTHO05D002371 5.0e-07 59.3 37 67.6
Actinidia30775 Actinidia chinensis HOM05D001432 ORTHO05D002371 6.6e-07 58.9 34 70.6
CSS0033306 Camellia sinensis var. sinensis HOM05D001432 ORTHO05D002371 6.6e-07 58.9 34 70.6
Haze_22273 Corylus avellana HOM05D001432 ORTHO05D002371 6.6e-07 58.9 37 67.6
Gohir.A05G266800 Gossypium hirsutum HOM05D001432 ORTHO05D002371 6.6e-07 58.9 37 67.6
Gorai.009G280900 Gossypium raimondii HOM05D001432 ORTHO05D002371 6.6e-07 58.9 37 67.6
Hma1.2p1_0049F.1_g028210 Hydrangea macrophylla HOM05D000455 ORTHO05D010375 6.6e-07 58.9 105 41.0
Nitab4.5_0007455g0010 Nicotiana tabacum HOM05D001432 ORTHO05D002371 6.6e-07 58.9 37 67.6
PGR042G3104 Punica granatum HOM05D001432 ORTHO05D002371 6.6e-07 58.9 37 70.3
TAR628G0761 Trochodendron aralioides HOM05D001432 ORTHO05D002371 8.6e-07 58.5 37 67.6
MSTRG.24456 Avicennia marina HOM05D001432 ORTHO05D002371 1.1e-06 58.2 37 64.9
Dinv01855 Davidia involucrata HOM05D000455 ORTHO05D000434 1.1e-06 58.2 50 68.0
Nn1g00300 Nelumbo nucifera HOM05D000455 ORTHO05D000434 1.1e-06 58.2 51 60.8
TAR376G0873 Trochodendron aralioides HOM05D001432 ORTHO05D002371 1.1e-06 58.2 37 67.6
TAR629G0003 Trochodendron aralioides HOM05D000455 ORTHO05D000434 1.1e-06 58.2 49 63.3
Cfa013639 Carpinus fangiana HOM05D001432 ORTHO05D002371 1.5e-06 57.8 37 67.6
Dinv10484 Davidia involucrata HOM05D000455 ORTHO05D000434 1.5e-06 57.8 117 43.6
Lalb_Chr10g0102401 Lupinus albus HOM05D001432 ORTHO05D002371 1.5e-06 57.8 35 71.4
Nitab4.5_0000232g0110 Nicotiana tabacum HOM05D001432 ORTHO05D002371 1.5e-06 57.8 34 70.6
Potri.002G096900 Populus trichocarpa HOM05D001432 ORTHO05D002371 1.5e-06 57.8 37 67.6
Manes.02G152400 Manihot esculenta HOM05D001432 ORTHO05D002371 1.9e-06 57.4 33 72.7
EL10Ac1g01211 Beta vulgaris HOM05D001432 ORTHO05D002371 2.5e-06 57.0 35 68.6
Gohir.A09G189300 Gossypium hirsutum HOM05D000455 ORTHO05D000434 2.5e-06 57.0 71 49.3
MD00G1201600 Malus domestica HOM05D001432 ORTHO05D002371 2.5e-06 57.0 33 72.7
Prupe.1G517600 Prunus persica HOM05D001432 ORTHO05D002371 2.5e-06 57.0 33 72.7
QL12p036839 Quercus lobata HOM05D001432 ORTHO05D002371 2.5e-06 57.0 33 72.7
vmacro21266 Vaccinium macrocarpon HOM05D001432 ORTHO05D002371 2.5e-06 57.0 34 70.6
AL6G41630 Arabidopsis lyrata HOM05D001432 ORTHO05D002371 3.3e-06 56.6 34 70.6
AT4G08920 Arabidopsis thaliana HOM05D001432 ORTHO05D002371 3.3e-06 56.6 34 70.6
Carub.0006s2751 Capsella rubella HOM05D001432 ORTHO05D002371 3.3e-06 56.6 34 70.6
CARHR259940 Cardamine hirsuta HOM05D001432 ORTHO05D002371 3.3e-06 56.6 34 70.6
Eucgr.F00326 Eucalyptus grandis HOM05D001432 ORTHO05D002371 3.3e-06 56.6 35 68.6
Glyma.04G101500 Glycine max HOM05D001432 ORTHO05D002371 3.3e-06 56.6 33 72.7
Gohir.D05G268400 Gossypium hirsutum HOM05D001432 ORTHO05D002371 3.3e-06 56.6 37 64.9
Lj4A102T61 Lonicera japonica HOM05D001432 ORTHO05D002371 3.3e-06 56.6 37 67.6
Nitab4.5_0000421g0020 Nicotiana tabacum HOM05D001432 ORTHO05D002371 3.3e-06 56.6 37 64.9
Nitab4.5_0003380g0010 Nicotiana tabacum HOM05D001432 ORTHO05D002371 3.3e-06 56.6 37 64.9
Oeu053220.1 Olea europaea HOM05D001432 ORTHO05D002371 3.3e-06 56.6 37 67.6
Sabra02G0076200 Salix brachista HOM05D001432 ORTHO05D002371 3.3e-06 56.6 33 72.7
unitig_22.g5823 Utricularia gibba HOM05D001432 ORTHO05D002371 3.3e-06 56.6 34 70.6
Atru.chr13.1183 Acer truncatum HOM05D001432 ORTHO05D002371 4.3e-06 56.2 33 69.7
Aa31LG9G14620 Aethionema arabicum HOM05D001432 ORTHO05D002371 4.3e-06 56.2 34 67.6
Aqoxy5G01902 Aquilegia oxysepala HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 62.2
AUR62018922 Chenopodium quinoa HOM05D001432 ORTHO05D002371 4.3e-06 56.2 35 68.6
COL.COLO4_16390 Corchorus olitorius HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 64.9
Eucgr.E01022 Eucalyptus grandis HOM05D000455 ORTHO05D000434 4.3e-06 56.2 70 50.0
Gohir.A05G226100 Gossypium hirsutum HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 64.9
Gohir.D05G228900 Gossypium hirsutum HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 64.9
Gorai.009G236700 Gossypium raimondii HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 64.9
MBI05_g39036_MAGBIO Magnolia biondii HOM05D001432 ORTHO05D002371 4.3e-06 56.2 33 69.7
Sabra05G0124200 Salix brachista HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 62.2
THA.LOC104813117 Tarenaya hassleriana HOM05D001432 ORTHO05D002371 4.3e-06 56.2 35 65.7
Thecc.08G106300 Theobroma cacao HOM05D001432 ORTHO05D002371 4.3e-06 56.2 37 64.9
Dinv34975 Davidia involucrata HOM05D000455 ORTHO05D000434 5.6e-06 55.8 49 59.2
Potri.003G143000 Populus trichocarpa HOM05D000455 ORTHO05D000434 5.6e-06 55.8 62 51.6
Potri.005G164700 Populus trichocarpa HOM05D001432 ORTHO05D002371 5.6e-06 55.8 37 62.2
THA.LOC104816737 Tarenaya hassleriana HOM05D001432 ORTHO05D002371 5.6e-06 55.8 37 64.9
CiPaw.08G045400 Carya illinoinensis HOM05D001432 ORTHO05D002371 7.3e-06 55.5 33 69.7
Ciclev10000591m.g Citrus clementina HOM05D001432 ORTHO05D002371 7.3e-06 55.5 33 69.7
Dinv24849 Davidia involucrata HOM05D000455 ORTHO05D000434 7.3e-06 55.5 242 29.8
Duzib093G0459 Durio zibethinus HOM05D001432 ORTHO05D002371 7.3e-06 55.5 35 65.7
Glyma.06G103200 Glycine max HOM05D001432 ORTHO05D002371 7.3e-06 55.5 33 69.7
MD15G1369900 Malus domestica HOM05D001432 ORTHO05D002371 7.3e-06 55.5 33 72.7
PSO063G2561 Papaver somniferum HOM05D000455 ORTHO05D000434 7.3e-06 55.5 49 59.2
PSO170G2314 Papaver somniferum HOM05D000455 ORTHO05D000434 7.3e-06 55.5 49 59.2
SGA_v2.0_scaffold28G11918 Striga asiatica HOM05D001432 ORTHO05D002371 7.3e-06 55.5 33 72.7
arahy.Tifrunner.gnm1.ann1.FSP2M7 Arachis hypogaea HOM05D001432 ORTHO05D002371 9.5e-06 55.1 33 72.7
arahy.Tifrunner.gnm1.ann1.VS4P4P Arachis hypogaea HOM05D001432 ORTHO05D002371 9.5e-06 55.1 33 72.7
Cpa.g.sc36.135 Carica papaya HOM05D001432 ORTHO05D002371 9.5e-06 55.1 37 64.9
DCAR_008737 Daucus carota HOM05D001432 ORTHO05D002371 9.5e-06 55.1 34 70.6
Duzib041G0596 Durio zibethinus HOM05D001432 ORTHO05D002371 9.5e-06 55.1 35 65.7
Glyma.14G174200 Glycine max HOM05D001432 ORTHO05D002371 9.5e-06 55.1 33 69.7
Lsat_1_v5_gn_1_3881 Lactuca sativa HOM05D001432 ORTHO05D002371 9.5e-06 55.1 37 62.2
Medtr5g063920 Medicago truncatula HOM05D001432 ORTHO05D002371 9.5e-06 55.1 34 64.7
Thecc.03G302500 Theobroma cacao HOM05D000455 ORTHO05D000434 9.5e-06 55.1 62 51.6
GSVIVG01009033001 Vitis vinifera HOM05D001432 ORTHO05D002371 9.5e-06 55.1 33 69.7


User provided reference genes

Program Settings