Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 9.0e-62 240.0 112 100.0
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 1.4e-43 179.5 87 95.4
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 2.5e-43 178.7 87 95.4
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.5e-43 178.7 87 95.4
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.5e-43 178.7 87 95.4
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 3.2e-43 178.3 87 94.3
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 5.5e-43 177.6 87 93.1
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 9.3e-43 176.8 87 94.3
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 9.3e-43 176.8 87 93.1
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 9.3e-43 176.8 90 90.0
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 9.3e-43 176.8 87 90.8
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.2e-42 176.4 87 93.1
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.2e-42 176.4 87 94.3
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 1.2e-42 176.4 90 87.8
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 1.2e-42 176.4 87 93.1
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.6e-42 176.0 87 93.1
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 1.6e-42 176.0 87 93.1
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 2.1e-42 175.6 85 95.3
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 2.1e-42 175.6 86 94.2
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 3.6e-42 174.9 87 92.0
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 3.6e-42 174.9 87 90.8
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 3.6e-42 174.9 87 90.8
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 3.6e-42 174.9 87 90.8
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 3.6e-42 174.9 87 92.0
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 3.6e-42 174.9 87 92.0
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 3.6e-42 174.9 85 94.1
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 4.6e-42 174.5 87 93.1
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 4.6e-42 174.5 87 93.1
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 4.6e-42 174.5 87 92.0
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 4.6e-42 174.5 87 92.0
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 4.6e-42 174.5 84 96.4
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 4.6e-42 174.5 87 93.1
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 6.1e-42 174.1 87 90.8
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 7.9e-42 173.7 87 92.0
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 7.9e-42 173.7 87 93.1
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 7.9e-42 173.7 85 92.9
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 7.9e-42 173.7 85 92.9
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 1.0e-41 173.3 87 90.8
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.0e-41 173.3 87 89.7
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 1.0e-41 173.3 84 94.0
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 1.0e-41 173.3 87 89.7
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.8e-41 172.6 87 89.7
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 1.8e-41 172.6 83 95.2
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 1.8e-41 172.6 85 94.1
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 1.8e-41 172.6 85 94.1
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 1.8e-41 172.6 84 94.0
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 2.3e-41 172.2 87 90.8
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 2.3e-41 172.2 87 90.8
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 2.3e-41 172.2 87 89.7
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 3.0e-41 171.8 87 92.0
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 3.0e-41 171.8 87 88.5
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 3.0e-41 171.8 87 90.8
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 3.0e-41 171.8 83 94.0
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 3.9e-41 171.4 87 89.7
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 3.9e-41 171.4 87 89.7
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 3.9e-41 171.4 87 88.5
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 3.9e-41 171.4 87 87.4
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 3.9e-41 171.4 87 87.4
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 5.1e-41 171.0 87 89.7
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 5.1e-41 171.0 87 90.8
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 6.7e-41 170.6 83 94.0
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 6.7e-41 170.6 82 93.9
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 6.7e-41 170.6 87 89.7
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 6.7e-41 170.6 87 89.7
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 8.7e-41 170.2 87 86.2
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.1e-40 169.9 87 88.5
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.5e-40 169.5 87 89.7
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 1.5e-40 169.5 87 88.5
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 1.9e-40 169.1 87 87.4
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 2.5e-40 168.7 87 90.8
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 2.5e-40 168.7 87 87.4
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 4.3e-40 167.9 85 90.6
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 5.7e-40 167.5 84 90.5
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 5.7e-40 167.5 87 86.2
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 5.7e-40 167.5 83 92.8
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 7.4e-40 167.2 83 92.8
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 9.7e-40 166.8 83 91.6
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 1.3e-39 166.4 83 90.4
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 1.3e-39 166.4 81 93.8
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.3e-39 166.4 87 89.7
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 1.3e-39 166.4 84 92.9
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.7e-39 166.0 83 90.4
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 2.2e-39 165.6 87 86.2
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 2.2e-39 165.6 87 85.1
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 2.8e-39 165.2 83 89.2
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 3.7e-39 164.9 83 89.2
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 4.8e-39 164.5 83 88.0
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 4.8e-39 164.5 82 91.5
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 6.3e-39 164.1 84 88.1
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 8.2e-39 163.7 90 82.2
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 8.2e-39 163.7 87 85.1
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.1e-38 163.3 87 85.1
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 1.1e-38 163.3 83 89.2
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 1.1e-38 163.3 83 86.7
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 1.1e-38 163.3 95 77.9
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 1.4e-38 162.9 83 88.0
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 1.8e-38 162.5 83 88.0
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 2.4e-38 162.2 83 88.0
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 2.4e-38 162.2 87 81.6
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 2.4e-38 162.2 83 86.7
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 3.1e-38 161.8 86 84.9
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 3.1e-38 161.8 87 85.1
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 4.1e-38 161.4 85 84.7
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 5.3e-38 161.0 83 86.7
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 5.3e-38 161.0 86 82.6
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 6.9e-38 160.6 83 85.5
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 1.2e-37 159.8 85 82.4
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 2.6e-37 158.7 87 81.6
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 5.9e-37 157.5 87 80.5
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 7.7e-37 157.1 80 90.0
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 2.2e-36 155.6 85 82.4
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 2.9e-36 155.2 87 81.6
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 2.9e-36 155.2 87 80.5
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.8e-36 154.8 87 82.8
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 4.2e-35 151.4 87 78.2
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 9.4e-35 150.2 87 77.0
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 2.4e-30 135.6 87 71.3
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 2.6e-29 132.1 87 67.8
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 3.4e-29 131.7 87 67.8
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.7e-28 129.4 84 72.6
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 2.2e-28 129.0 87 70.1
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 7.2e-27 124.0 87 67.8
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 1.2e-26 123.2 87 64.4
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 6.1e-26 120.9 61 90.2
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 2.2e-23 112.5 53 94.3
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-19 99.4 88 53.4
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 6.3e-15 84.3 48 83.3


User provided reference genes

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