Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 2.1e-79 298.9 142 100.0
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 9.0e-75 283.5 142 95.1
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 8.4e-65 250.4 139 82.7
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 3.9e-62 241.5 140 80.7
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 5.1e-62 241.1 139 82.7
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 2.1e-60 235.7 139 76.3
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 8.2e-60 233.8 139 76.3
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.8e-59 232.6 139 75.5
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.0e-57 226.9 139 78.4
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 2.2e-57 225.7 147 75.5
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 3.8e-57 224.9 140 75.7
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 8.5e-57 223.8 124 82.3
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 7.2e-56 220.7 139 75.5
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.2e-55 219.9 132 73.5
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.6e-55 219.5 145 71.0
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 2.1e-55 219.2 139 74.8
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 3.6e-55 218.4 144 70.8
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 3.6e-55 218.4 140 72.1
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 4.6e-55 218.0 145 70.3
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 6.1e-55 217.6 139 74.1
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 6.1e-55 217.6 141 71.6
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 1.0e-54 216.9 139 71.9
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.8e-54 216.1 125 80.8
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 2.3e-54 215.7 139 71.9
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 3.0e-54 215.3 146 71.9
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 3.9e-54 214.9 141 68.8
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 3.9e-54 214.9 139 70.5
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 5.1e-54 214.5 139 70.5
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 5.1e-54 214.5 139 74.1
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 6.7e-54 214.2 140 72.9
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 6.7e-54 214.2 147 70.1
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 6.7e-54 214.2 139 69.1
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 8.7e-54 213.8 143 67.8
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 8.7e-54 213.8 139 70.5
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 1.1e-53 213.4 139 70.5
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.9e-53 212.6 134 74.6
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 1.9e-53 212.6 139 68.3
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 3.3e-53 211.8 139 68.3
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 3.3e-53 211.8 139 68.3
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 3.3e-53 211.8 139 68.3
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 4.3e-53 211.5 134 75.4
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 5.7e-53 211.1 132 75.0
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 7.4e-53 210.7 142 68.3
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 7.4e-53 210.7 139 68.3
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 9.7e-53 210.3 145 70.3
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 9.7e-53 210.3 135 72.6
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 9.7e-53 210.3 139 68.3
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 9.7e-53 210.3 139 68.3
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 9.7e-53 210.3 139 68.3
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 9.7e-53 210.3 139 67.6
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.3e-52 209.9 142 67.6
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.3e-52 209.9 141 68.1
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 1.3e-52 209.9 139 68.3
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.3e-52 209.9 142 71.1
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 1.3e-52 209.9 139 69.1
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 1.6e-52 209.5 139 69.1
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.6e-52 209.5 133 72.9
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.2e-52 209.1 140 67.1
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 2.2e-52 209.1 148 70.9
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 2.2e-52 209.1 145 67.6
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.8e-52 208.8 139 69.1
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 3.7e-52 208.4 132 70.5
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 4.8e-52 208.0 125 76.8
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 4.8e-52 208.0 130 73.8
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 4.8e-52 208.0 139 67.6
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 6.3e-52 207.6 141 66.0
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 6.3e-52 207.6 134 69.4
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.2e-52 207.2 139 67.6
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 8.2e-52 207.2 128 71.9
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 1.1e-51 206.8 133 72.9
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 1.1e-51 206.8 139 69.8
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 1.1e-51 206.8 129 74.4
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 1.1e-51 206.8 150 65.3
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 5.3e-51 204.5 144 64.6
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 9.1e-51 203.8 138 66.7
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.5e-50 203.0 136 66.9
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.5e-50 203.0 148 64.2
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 2.0e-50 202.6 141 67.4
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 2.0e-50 202.6 125 73.6
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 2.6e-50 202.2 134 69.4
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 3.4e-50 201.8 134 65.7
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 7.7e-50 200.7 140 64.3
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 1.0e-49 200.3 134 66.4
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-49 199.1 148 63.5
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-49 199.1 148 63.5
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 2.9e-49 198.7 142 64.8
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 2.9e-49 198.7 140 67.1
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 2.9e-49 198.7 135 66.7
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 6.5e-49 197.6 143 62.2
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 2.5e-48 195.7 129 68.2
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 4.2e-48 194.9 142 64.1
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 8.8e-46 187.2 127 66.9
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 2.2e-44 182.6 129 64.3
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 2.2e-41 172.6 131 59.5
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.8e-41 171.8 102 73.5
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 5.0e-41 171.4 127 63.8
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 6.1e-39 164.5 100 75.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 3.3e-37 158.7 128 59.4
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.1e-35 153.7 115 64.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.2e-34 150.2 127 55.1
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.7e-31 139.0 124 49.2
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 2.4e-27 125.9 80 75.0
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.1e-27 125.2 87 60.9
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 4.5e-26 121.7 148 45.3
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.7e-25 119.8 139 47.5
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 8.0e-23 110.9 76 68.4
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 2.3e-22 109.4 75 68.0
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.1e-16 90.5 71 64.8
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 9.5e-16 87.4 139 36.7
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 5.4e-11 71.6 55 61.8
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.2e-11 70.9 59 69.5
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-10 69.3 59 67.8
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-09 66.2 59 66.1
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-09 66.2 59 66.1
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.5e-08 60.8 59 62.7
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 2.3e-06 56.2 44 61.4


User provided reference genes

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