Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12439 Davidia involucrata HOM05D007742 ORTHO05D004072 1.8e-33 145.2 68 100.0
Dinv33270 Davidia involucrata HOM05D007742 ORTHO05D004072 3.8e-23 110.9 52 92.3
CiPaw.15G155500 Carya illinoinensis HOM05D007742 ORTHO05D004072 6.1e-13 77.0 59 59.3
Hma1.2p1_0868F.1_g230420 Hydrangea macrophylla HOM05D007742 ORTHO05D004072 3.0e-12 74.7 42 78.6
Cc07_g01390 Coffea canephora HOM05D007742 ORTHO05D004072 8.8e-12 73.2 57 59.6
Cc07_g01400 Coffea canephora HOM05D007742 ORTHO05D004072 8.8e-12 73.2 57 59.6
Nn4g22099 Nelumbo nucifera HOM05D007742 ORTHO05D004072 4.4e-11 70.9 59 50.8
Hund19588 Selenicereus undatus HOM05D007742 ORTHO05D004072 5.7e-11 70.5 56 51.8
TAR374G0633 Trochodendron aralioides HOM05D007742 ORTHO05D004072 5.7e-11 70.5 59 50.8
Sc16g0003130 Simmondsia chinensis HOM05D007742 ORTHO05D004072 1.1e-09 66.2 53 58.5
Prupe.3G314400 Prunus persica HOM05D007742 ORTHO05D004072 3.1e-09 64.7 72 44.4
BraA09t37545Z Brassica rapa HOM05D009880 ORTHO05D004072 1.2e-08 62.8 66 47.0
Ciclev10014788m.g Citrus clementina HOM05D007742 ORTHO05D004072 1.2e-08 62.8 59 47.5
Actinidia37712 Actinidia chinensis HOM05D007742 ORTHO05D004072 2.0e-08 62.0 52 53.8
BcaC04g22033 Brassica carinata HOM05D009880 ORTHO05D004072 2.0e-08 62.0 66 47.0
Haze_14967 Corylus avellana HOM05D007742 ORTHO05D004072 2.0e-08 62.0 55 50.9
C09p24280 Brassica napus HOM05D009880 ORTHO05D004072 4.5e-08 60.8 66 47.0
BolC9t55345H Brassica oleracea HOM05D009880 ORTHO05D004072 4.5e-08 60.8 66 47.0
Carub.0005s0890 Capsella rubella HOM05D008124 ORTHO05D004072 4.5e-08 60.8 59 42.4
QL02p068827 Quercus lobata HOM05D007742 ORTHO05D004072 5.9e-08 60.5 54 53.7
Aa31LG2G11790 Aethionema arabicum HOM05D009880 ORTHO05D004072 1.3e-07 59.3 53 49.1
AL5G21140 Arabidopsis lyrata HOM05D008124 ORTHO05D004072 1.3e-07 59.3 60 41.7
AUR62037803 Chenopodium quinoa HOM05D007742 ORTHO05D004072 1.3e-07 59.3 55 47.3
THA.LOC104823128 Tarenaya hassleriana HOM05D009880 ORTHO05D004072 1.3e-07 59.3 54 51.9
AT3G42860 Arabidopsis thaliana HOM05D008124 ORTHO05D004072 1.7e-07 58.9 63 39.7
MSTRG.25687 Avicennia marina HOM05D007742 ORTHO05D004072 1.7e-07 58.9 49 55.1
A09p19280 Brassica napus HOM05D009880 ORTHO05D004072 1.7e-07 58.9 66 45.5
EL10As2g23272 Beta vulgaris HOM05D007742 ORTHO05D004072 2.3e-07 58.5 55 43.6
SGA_v2.0_scaffold305G47989 Striga asiatica HOM05D007742 ORTHO05D004072 2.3e-07 58.5 48 50.0
Aa31LG2G11760 Aethionema arabicum HOM05D009880 ORTHO05D004072 2.9e-07 58.2 54 44.4
EL10As2g23251 Beta vulgaris HOM05D007742 ORTHO05D004072 2.9e-07 58.2 55 47.3
GSVIVG01032966001 Vitis vinifera HOM05D007742 ORTHO05D004072 2.9e-07 58.2 30 76.7
CARHR152360 Cardamine hirsuta HOM05D008124 ORTHO05D004072 5.0e-07 57.4 72 37.5
Thhalv10013799m.g Eutrema salsugineum HOM05D008124 ORTHO05D004072 6.6e-07 57.0 63 38.1
Sp6g17920 Schrenkiella parvula HOM05D008124 ORTHO05D004072 8.6e-07 56.6 63 38.1
DCAR_008617 Daucus carota HOM05D007742 ORTHO05D004072 3.3e-06 54.7 50 50.0
Sp6g30080 Schrenkiella parvula HOM05D009880 ORTHO05D004072 3.3e-06 54.7 68 41.2
Thhalv10013728m.g Eutrema salsugineum HOM05D009880 ORTHO05D004072 4.2e-06 54.3 68 41.2


User provided reference genes

Program Settings