Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 1.3e-79 299.7 155 100.0
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 3.6e-45 185.3 104 92.3
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.7e-42 176.4 122 78.7
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 8.4e-42 174.1 122 73.8
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.9e-41 172.9 153 64.7
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 1.9e-41 172.9 122 75.4
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.4e-41 172.6 122 73.8
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 9.3e-41 170.6 122 73.0
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.3e-39 166.8 122 73.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.3e-39 166.8 122 75.4
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 2.3e-39 166.0 122 73.8
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 6.6e-39 164.5 123 72.4
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 8.7e-39 164.1 99 85.9
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 8.7e-39 164.1 127 70.1
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.5e-38 163.3 122 72.1
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 3.3e-38 162.2 147 59.9
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 7.3e-38 161.0 125 68.8
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 9.6e-38 160.6 127 66.9
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 9.6e-38 160.6 127 66.9
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.3e-37 160.2 122 72.1
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 2.8e-37 159.1 122 71.3
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 6.2e-37 157.9 147 58.5
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 4.0e-36 155.2 96 80.2
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 5.3e-36 154.8 147 58.5
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 6.9e-36 154.5 100 78.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 6.9e-36 154.5 107 72.0
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.5e-35 153.3 122 68.0
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 1.5e-35 153.3 122 68.0
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 1.5e-35 153.3 122 68.0
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 3.4e-35 152.1 147 56.5
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 3.4e-35 152.1 97 79.4
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 4.5e-35 151.8 122 67.2
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 1.7e-34 149.8 125 68.0
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.9e-34 149.1 122 66.4
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 2.9e-34 149.1 122 65.6
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 3.8e-34 148.7 123 65.9
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 4.9e-34 148.3 123 63.4
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.1e-33 147.1 151 55.0
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 1.9e-33 146.4 122 63.9
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 1.9e-33 146.4 120 67.5
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 3.2e-33 145.6 111 72.1
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 4.2e-33 145.2 100 71.0
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 4.2e-33 145.2 117 65.8
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 5.4e-33 144.8 150 54.0
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.4e-33 144.8 104 70.2
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 7.1e-33 144.4 101 71.3
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.2e-32 143.7 104 73.1
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 3.5e-32 142.1 104 71.2
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.0e-31 140.6 92 76.1
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.3e-31 140.2 104 69.2
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.8e-31 139.8 104 68.3
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 2.3e-31 139.4 104 70.2
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 3.0e-31 139.0 117 63.2
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 3.9e-31 138.7 124 59.7
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 5.1e-31 138.3 104 70.2
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 6.7e-31 137.9 118 61.0
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 8.7e-31 137.5 133 58.6
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 8.7e-31 137.5 127 61.4
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.5e-30 136.7 104 68.3
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 2.5e-30 136.0 104 69.2
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 3.3e-30 135.6 93 75.3
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 4.3e-30 135.2 113 63.7
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 4.3e-30 135.2 114 62.3
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 4.3e-30 135.2 118 60.2
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 5.6e-30 134.8 122 59.0
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 7.4e-30 134.4 114 62.3
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 7.4e-30 134.4 114 62.3
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 7.4e-30 134.4 97 73.2
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 9.6e-30 134.0 93 73.1
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.3e-29 133.7 93 74.2
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.6e-29 133.3 117 60.7
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 2.1e-29 132.9 94 66.0
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 2.8e-29 132.5 113 61.9
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 2.8e-29 132.5 113 61.9
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 2.8e-29 132.5 113 61.9
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 3.7e-29 132.1 119 57.1
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 4.8e-29 131.7 119 57.1
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 6.2e-29 131.3 120 56.7
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 6.2e-29 131.3 99 68.7
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 6.2e-29 131.3 92 73.9
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 8.1e-29 131.0 97 67.0
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 1.1e-28 130.6 117 59.8
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.1e-28 130.6 95 69.5
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.4e-28 130.2 132 52.3
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 3.1e-28 129.0 117 59.0
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 5.3e-28 128.3 105 64.8
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 1.2e-27 127.1 117 58.1
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.2e-27 127.1 93 63.4
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.2e-27 127.1 94 62.8
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 3.4e-27 125.6 114 60.5
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 4.5e-27 125.2 116 56.9
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 5.8e-27 124.8 140 53.6
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.2e-26 122.9 155 46.5
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.8e-26 122.1 157 45.9
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 1.4e-25 120.2 120 55.8
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.9e-25 119.8 121 54.5
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 5.5e-25 118.2 96 60.4
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 1.6e-24 116.7 123 56.9
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.1e-24 116.3 96 62.5
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.5e-24 115.5 121 52.9
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 4.6e-24 115.2 120 52.5
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 6.0e-24 114.8 123 55.3
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 6.0e-24 114.8 127 47.2
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 7.9e-24 114.4 122 49.2
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.8e-23 113.2 120 50.8
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 6.2e-21 104.8 70 74.3
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 2.4e-20 102.8 143 47.6
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 2.4e-20 102.8 122 52.5
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 3.1e-20 102.4 111 55.9
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 9.0e-20 100.9 70 70.0
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 9.0e-20 100.9 94 51.1
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.4e-19 99.0 111 51.4
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 6.5e-18 94.7 122 42.6
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 8.4e-18 94.4 70 64.3
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 4.2e-17 92.0 81 61.7
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 5.5e-17 91.7 122 43.4
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.4e-12 77.0 86 44.2
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 2.6e-11 72.8 99 39.4


User provided reference genes

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