Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 0.0e+00 1223.4 615 100.0
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 4.3e-206 721.8 566 65.2
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.5e-198 696.0 566 62.9
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 4.0e-196 688.7 553 64.2
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 5.3e-180 635.2 542 61.3
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 1.1e-172 610.9 562 55.7
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 7.6e-171 604.7 565 55.9
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 2.8e-165 586.3 569 55.5
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 7.6e-163 578.2 562 53.0
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 1.0e-162 577.8 563 54.5
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 1.3e-162 577.4 565 54.5
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 6.5e-162 575.1 549 53.9
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 3.7e-157 559.3 527 54.5
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 3.1e-156 556.2 560 52.3
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 4.1e-156 555.8 562 53.2
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 1.0e-154 551.2 569 52.7
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 1.8e-151 540.4 566 50.7
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 5.1e-151 538.9 550 51.8
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 8.8e-151 538.1 550 52.0
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 3.3e-150 536.2 545 52.5
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.8e-148 530.4 551 51.2
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 1.2e-147 527.7 550 51.3
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 2.6e-147 526.6 553 48.5
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 5.9e-147 525.4 563 50.1
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 1.3e-146 524.2 563 49.9
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 3.8e-146 522.7 563 49.9
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 2.1e-144 516.9 560 47.5
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 6.1e-144 515.4 552 50.0
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 1.0e-143 514.6 552 47.8
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 3.9e-143 512.7 572 49.1
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 1.5e-142 510.8 559 50.3
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 8.2e-141 505.0 547 48.8
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 1.1e-140 504.6 560 47.3
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.4e-140 504.2 496 55.0
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.0e-139 500.4 549 49.2
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 1.0e-138 498.0 560 46.6
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 6.5e-138 495.4 552 48.4
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 2.3e-135 486.9 557 47.9
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 3.3e-134 483.0 564 47.3
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 1.4e-132 477.6 345 68.7
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 2.4e-132 476.9 568 47.4
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 5.3e-132 475.7 557 47.0
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 1.6e-131 474.2 506 49.8
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 6.5e-130 468.8 542 46.5
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 8.5e-130 468.4 555 48.1
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 1.9e-129 467.2 557 47.8
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 3.2e-129 466.5 556 46.8
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 2.7e-128 463.4 542 45.0
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 6.1e-128 462.2 541 47.0
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 1.4e-127 461.1 547 47.2
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 6.8e-127 458.8 542 45.2
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 1.2e-126 458.0 545 47.9
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 1.2e-126 458.0 574 48.1
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 3.4e-126 456.4 559 45.8
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 1.3e-125 454.5 566 45.6
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 3.7e-125 453.0 557 46.1
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 1.4e-124 451.1 524 46.0
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 4.5e-123 446.0 553 45.6
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 9.5e-121 438.3 561 45.6
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 3.4e-118 429.9 546 44.3
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 5.4e-116 422.5 537 44.7
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.6e-115 421.0 545 42.8
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 4.5e-115 419.5 535 43.6
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 7.3e-113 412.1 543 42.2
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 1.2e-112 411.4 525 44.2
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.6e-112 409.8 535 42.6
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 3.5e-107 393.3 546 41.0
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 3.5e-107 393.3 536 42.4
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 1.0e-106 391.7 559 42.8
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 1.5e-105 387.9 432 49.3
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 3.6e-104 383.3 547 39.5
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 8.0e-104 382.1 550 40.4
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 1.4e-103 381.3 550 40.2
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 1.8e-103 380.9 546 40.5
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 1.8e-103 380.9 546 40.5
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 2.3e-103 380.6 542 40.4
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 6.8e-103 379.0 546 40.1
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 7.5e-102 375.6 306 65.7
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 1.1e-100 371.7 548 40.0
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.7e-98 364.4 544 39.0
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 1.5e-97 361.3 553 38.5
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 8.9e-95 352.1 560 38.9
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.7e-93 347.8 458 43.4
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 6.4e-93 345.9 552 37.5
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 5.6e-89 332.8 287 62.4
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 5.8e-86 322.8 569 36.6
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 2.9e-85 320.5 539 36.5
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 3.8e-85 320.1 569 36.4
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 8.7e-82 308.9 269 60.2
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 8.1e-80 302.4 547 36.4
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 1.1e-79 302.0 561 36.4
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 6.2e-72 276.2 569 32.2
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 5.3e-71 273.1 386 42.2
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.1e-60 238.8 358 42.7
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 1.8e-58 231.5 335 41.8
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.6e-56 224.9 179 62.0
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 4.8e-56 223.4 258 51.2
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 2.7e-35 154.5 267 38.6
Nn2g13629 Nelumbo nucifera HOM05D001630 ORTHO05D007178 4.7e-35 153.7 468 29.3
SEGI_30477 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 2.3e-34 151.4 331 31.7
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 7.4e-33 146.4 540 25.4
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 6.3e-32 143.3 597 22.8
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 2.6e-30 137.9 107 64.5
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 1.3e-24 119.0 108 54.6
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.2e-24 118.2 102 59.8
CARHR220410 Cardamine hirsuta HOM05D006201 ORTHO05D007178 4.4e-17 94.0 133 36.8
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 3.8e-13 80.9 80 46.2
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 2.1e-11 75.1 136 30.1
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 2.7e-11 74.7 76 46.1
Rhsim05G0204900 Rhododendron simsii HOM05D006201 ORTHO05D007178 4.0e-10 70.9 51 68.6
RhsimUnG0117100 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.2e-09 69.3 82 51.2
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 4.5e-06 57.4 50 52.0


User provided reference genes

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