Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 7.6e-217 756.9 391 100.0
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 1.9e-135 486.5 385 70.1
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 2.1e-126 456.4 385 66.2
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 1.0e-120 437.6 399 62.4
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 1.7e-120 436.8 390 63.8
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.1e-114 417.5 385 61.8
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.2e-113 414.1 408 58.8
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.6e-113 413.7 352 66.2
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 2.2e-107 393.3 385 59.7
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 1.0e-104 384.4 380 59.5
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 3.3e-103 379.4 386 58.5
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 7.4e-103 378.3 409 56.0
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 2.4e-101 373.2 392 57.7
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 9.0e-101 371.3 385 58.2
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 1.5e-100 370.5 361 60.4
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 2.6e-100 369.8 359 61.3
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 5.9e-100 368.6 381 58.5
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.4e-98 364.0 390 56.7
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 3.2e-98 362.8 386 54.9
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 5.5e-98 362.1 367 55.3
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 4.6e-97 359.0 379 55.7
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 7.9e-97 358.2 368 56.8
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.8e-96 357.1 386 54.9
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 3.0e-96 356.3 385 56.9
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 6.7e-96 355.1 386 54.7
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.9e-95 353.6 388 51.5
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 2.2e-94 350.1 373 53.9
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 3.7e-94 349.4 377 53.6
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 4.8e-94 349.0 376 54.3
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 8.2e-94 348.2 376 53.7
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 1.1e-93 347.8 377 55.2
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 9.0e-93 344.7 386 54.9
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 9.0e-93 344.7 386 52.8
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 4.5e-92 342.4 376 53.7
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 1.0e-91 341.3 375 52.5
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 2.2e-91 340.1 372 57.0
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 1.4e-88 330.9 381 55.6
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 8.8e-88 328.2 364 53.0
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 2.5e-87 326.6 352 55.1
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 5.7e-87 325.5 381 54.9
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 7.4e-87 325.1 389 50.9
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 6.9e-85 318.5 370 51.1
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 1.2e-84 317.8 374 52.1
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 3.4e-84 316.2 362 54.1
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 2.5e-82 310.1 388 49.7
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 3.2e-82 309.7 353 53.5
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 4.7e-81 305.8 354 50.8
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 6.7e-80 302.0 374 48.9
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 6.7e-80 302.0 368 50.3
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 1.5e-79 300.8 394 47.7
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 9.7e-79 298.1 392 47.7
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 6.3e-78 295.4 361 50.7
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 7.0e-77 292.0 361 49.6
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 7.0e-77 292.0 364 50.0
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 2.0e-76 290.4 386 47.2
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 2.0e-76 290.4 269 58.0
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 3.5e-76 289.7 269 58.7
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 4.5e-76 289.3 374 46.8
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 1.0e-75 288.1 369 48.5
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 2.9e-75 286.6 373 45.6
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 2.9e-75 286.6 373 45.8
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 1.1e-74 284.6 374 46.0
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 2.5e-74 283.5 360 46.9
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 4.2e-74 282.7 269 57.2
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 7.2e-74 282.0 363 46.8
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 9.4e-74 281.6 373 45.6
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 2.1e-73 280.4 363 46.8
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 2.7e-73 280.0 373 46.1
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 3.6e-73 279.6 374 45.7
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 1.8e-72 277.3 360 46.4
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 2.0e-71 273.9 361 49.3
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 4.4e-71 272.7 373 46.6
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 1.3e-70 271.2 373 46.4
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.7e-70 270.8 386 45.9
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 3.7e-70 269.6 361 48.2
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 7.7e-68 261.9 262 56.5
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 2.2e-67 260.4 366 46.4
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 2.5e-66 256.9 316 52.2
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.0e-64 251.5 363 42.7
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 4.4e-63 246.1 267 52.4
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 9.8e-63 245.0 373 42.4
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 2.8e-62 243.4 362 42.8
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 2.4e-61 240.4 372 43.3
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 7.0e-61 238.8 359 45.4
RcHm_v2.0_Chr3g0461601 Rosa chinensis HOM05D006201 ORTHO05D007178 1.3e-54 218.0 256 50.4
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.5e-52 209.9 233 51.5
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.7e-51 207.6 228 51.8
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.5e-47 194.5 398 37.4
CAN.G1473.9 Capsicum annuum HOM05D006201 ORTHO05D007178 9.8e-39 165.2 212 50.9
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 3.2e-37 160.2 128 68.0
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 3.6e-33 146.7 141 58.9
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 1.1e-32 145.2 144 57.6
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.3e-30 138.3 365 32.6
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 5.1e-27 126.3 126 60.3
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 1.5e-26 124.8 105 66.7
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 4.3e-26 123.2 227 37.4
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 3.6e-25 120.2 126 50.8
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 2.6e-23 114.0 230 34.8
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 1.1e-21 108.6 231 35.5
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 8.1e-17 92.4 86 59.3
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 2.4e-16 90.9 215 35.8
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 8.9e-16 89.0 127 43.3
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 1.6e-12 78.2 125 41.6
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 4.6e-12 76.6 56 69.6
HPP92_025098 Vanilla planifolia HOM05D006201 ORTHO05D007178 1.3e-09 68.6 227 27.3
SEGI_33665 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 1.4e-08 65.1 238 28.6
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 1.2e-07 62.0 211 27.5


User provided reference genes

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