Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11979 Davidia involucrata HOM05D006612 ORTHO05D009014 1.3e-114 416.4 202 100.0
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.9e-66 255.8 238 59.7
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.1e-60 237.3 259 53.3
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 1.5e-43 180.3 188 55.3
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.1e-36 157.5 238 39.9
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 4.9e-34 148.7 239 38.5
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 4.9e-34 148.7 239 38.5
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 6.4e-34 148.3 239 38.5
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 3.6e-29 132.5 197 40.1
Dinv03710 Davidia involucrata HOM05D015775 ORTHO05D010384 2.2e-26 123.2 88 62.5
Dinv06490 Davidia involucrata HOM05D000824 ORTHO05D010384 1.9e-22 110.2 186 35.5
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 5.3e-20 102.1 236 32.2
Dinv07358 Davidia involucrata HOM05D015775 ORTHO05D010384 1.0e-15 87.8 70 57.1
Dinv35504 Davidia involucrata HOM05D006612 ORTHO05D010384 5.1e-15 85.5 77 54.5
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 9.6e-14 81.3 210 28.6
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.1e-13 80.1 234 24.4
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 2.8e-13 79.7 91 45.1
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 1.8e-12 77.0 92 42.4
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 1.5e-11 73.9 77 51.9
Dinv08483 Davidia involucrata HOM05D006612 ORTHO05D010384 3.4e-11 72.8 46 80.4
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 4.5e-11 72.4 228 23.7
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 7.6e-11 71.6 77 49.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.9e-10 69.7 82 40.2
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 3.8e-10 69.3 213 25.4
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 3.8e-10 69.3 151 25.8
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 6.5e-10 68.6 80 41.2
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 6.5e-10 68.6 92 31.5
Dinv35503 Davidia involucrata HOM05D015775 ORTHO05D010384 1.4e-09 67.4 89 38.2
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 1.4e-09 67.4 83 38.6
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.9e-09 67.0 85 38.8
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.2e-09 65.9 88 36.4
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 4.2e-09 65.9 108 27.8
unitig_62.g23555 Utricularia gibba HOM05D000824 ORTHO05D003555 4.2e-09 65.9 164 26.8
CARHR205160 Cardamine hirsuta HOM05D000824 ORTHO05D003555 5.5e-09 65.5 241 24.9
CANSAT78G1911 Cannabis sativa HOM05D000096 ORTHO05D010619 7.1e-09 65.1 209 25.4
Carub.0006s0691 Capsella rubella HOM05D000824 ORTHO05D003555 7.1e-09 65.1 236 23.3
Lj9C471T8 Lonicera japonica HOM05D000824 ORTHO05D003555 7.1e-09 65.1 202 27.2
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-08 64.3 175 25.7
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-08 64.3 156 28.2
AL6G18370 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 1.6e-08 63.9 238 24.4
AT5G08020 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 1.6e-08 63.9 238 24.4
COL.COLO4_06851 Corchorus olitorius HOM05D000824 ORTHO05D003555 1.6e-08 63.9 199 27.1
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 1.6e-08 63.9 210 24.3
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 2.1e-08 63.5 231 23.4
Gohir.A03G070300 Gossypium hirsutum HOM05D000824 ORTHO05D003555 2.1e-08 63.5 199 26.6
Ah.11g047720 Amaranthus hybridus HOM05D000824 ORTHO05D003555 2.7e-08 63.2 202 25.2
THA.LOC104804633 Tarenaya hassleriana HOM05D000824 ORTHO05D003555 2.7e-08 63.2 202 24.3
Gorai.003G101500 Gossypium raimondii HOM05D000824 ORTHO05D003555 3.5e-08 62.8 199 26.1
Hund09917 Selenicereus undatus HOM05D000824 ORTHO05D003555 3.5e-08 62.8 196 25.5
Duzib084G0695 Durio zibethinus HOM05D000824 ORTHO05D003555 4.6e-08 62.4 199 26.1
Gohir.D03G096700 Gossypium hirsutum HOM05D000824 ORTHO05D003555 4.6e-08 62.4 199 26.1
Hund02583 Selenicereus undatus HOM05D000824 ORTHO05D003555 4.6e-08 62.4 200 25.5
Aa31LG3G18510 Aethionema arabicum HOM05D000824 ORTHO05D003555 6.1e-08 62.0 201 25.4
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-08 62.0 242 24.0
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 7.9e-08 61.6 234 23.5
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-07 61.2 155 28.4
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.0e-07 61.2 214 25.2
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-07 60.8 205 24.9
Solyc03g115050.3 Solanum lycopersicum HOM05D000824 ORTHO05D003555 1.8e-07 60.5 203 25.6
EL10Ac5g11138 Beta vulgaris HOM05D000824 ORTHO05D003555 2.3e-07 60.1 242 24.0
BcaB01g05642 Brassica carinata HOM05D000824 ORTHO05D003555 2.3e-07 60.1 204 26.0
A03p03540 Brassica napus HOM05D000824 ORTHO05D003555 2.3e-07 60.1 204 25.5
BolC3t12936H Brassica oleracea HOM05D000824 ORTHO05D003555 2.3e-07 60.1 204 26.0
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 2.3e-07 60.1 171 26.9
Peaxi162Scf00201g00330 Petunia axillaris HOM05D000824 ORTHO05D003555 2.3e-07 60.1 200 25.0
BcaNung06900 Brassica carinata HOM05D000824 ORTHO05D003555 3.0e-07 59.7 201 25.9
Cfa019342 Carpinus fangiana HOM05D000824 ORTHO05D003555 3.0e-07 59.7 207 25.6
DCAR_011568 Daucus carota HOM05D000824 ORTHO05D003555 3.0e-07 59.7 88 35.2
DCAR_011569 Daucus carota HOM05D000824 ORTHO05D003555 3.0e-07 59.7 88 35.2
Nitab4.5_0009401g0060 Nicotiana tabacum HOM05D000824 ORTHO05D003555 3.0e-07 59.7 200 24.5
Rhsim03G0120000 Rhododendron simsii HOM05D008336 ORTHO05D011520 3.0e-07 59.7 178 27.0
Sabra15G0082600 Salix brachista HOM05D000824 ORTHO05D003555 3.0e-07 59.7 252 23.4
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-07 59.3 223 23.8
THA.LOC104819400 Tarenaya hassleriana HOM05D000824 ORTHO05D003555 3.9e-07 59.3 201 23.4
BcaB01g05683 Brassica carinata HOM05D000824 ORTHO05D003555 5.1e-07 58.9 244 24.2
BraA03t09704Z Brassica rapa HOM05D000824 ORTHO05D003555 5.1e-07 58.9 205 25.4
Haze_07734 Corylus avellana HOM05D000824 ORTHO05D003555 5.1e-07 58.9 207 24.6
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 5.1e-07 58.9 210 20.0
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-07 58.9 103 30.1
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-07 58.9 103 30.1
ECA247G3309 Erigeron canadensis HOM05D000824 ORTHO05D003555 6.7e-07 58.5 200 27.0
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-07 58.5 89 28.1
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-07 58.5 237 23.6
Thecc.03G102500 Theobroma cacao HOM05D000824 ORTHO05D003555 6.7e-07 58.5 199 25.1
BolC9t53717H Brassica oleracea HOM05D000824 ORTHO05D003555 8.7e-07 58.2 241 24.5
CARHR274710 Cardamine hirsuta HOM05D000824 ORTHO05D003555 8.7e-07 58.2 201 23.9
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 8.7e-07 58.2 240 25.8
SEGI_23554 Sequoiadendron giganteum HOM05D000824 ORTHO05D003555 8.7e-07 58.2 197 24.4
BcaC04g23467 Brassica carinata HOM05D000824 ORTHO05D003555 1.1e-06 57.8 238 24.8
C09p08030 Brassica napus HOM05D000824 ORTHO05D003555 1.1e-06 57.8 238 24.8
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 1.1e-06 57.8 220 23.6
Oeu044875.1 Olea europaea HOM05D000824 ORTHO05D003555 1.1e-06 57.8 203 25.6
Peaxi162Scf00045g02132 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-06 57.8 175 26.9
BraA09t36368Z Brassica rapa HOM05D000824 ORTHO05D003555 1.5e-06 57.4 240 24.6
CAN.G1228.20 Capsicum annuum HOM05D000824 ORTHO05D003555 1.5e-06 57.4 203 25.1
Thhalv10013014m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 1.5e-06 57.4 201 23.9
HanXRQChr02g0044771 Helianthus annuus HOM05D000824 ORTHO05D003555 1.5e-06 57.4 209 25.8
Sc04g0004360 Simmondsia chinensis HOM05D000824 ORTHO05D003555 1.5e-06 57.4 200 24.0
Sopen03g034120 Solanum pennellii HOM05D000824 ORTHO05D003555 1.5e-06 57.4 203 24.6
PGSC0003DMG400024634 Solanum tuberosum HOM05D000824 ORTHO05D003555 1.5e-06 57.4 203 25.1
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-06 57.4 240 20.4
AL8G37660 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 1.9e-06 57.0 202 25.2
Sp2g24310 Schrenkiella parvula HOM05D000824 ORTHO05D003555 1.9e-06 57.0 201 25.4
MSTRG.11337 Avicennia marina HOM05D000824 ORTHO05D003555 2.5e-06 56.6 198 23.7
Ciclev10019317m.g Citrus clementina HOM05D000824 ORTHO05D003555 2.5e-06 56.6 238 22.7
DCAR_023168 Daucus carota HOM05D000824 ORTHO05D003555 2.5e-06 56.6 88 31.8
Manes.06G084200 Manihot esculenta HOM05D000824 ORTHO05D003555 2.5e-06 56.6 200 24.0
AT5G61000 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 3.3e-06 56.2 202 23.8
C03p03990 Brassica napus HOM05D000824 ORTHO05D003555 3.3e-06 56.2 204 25.5
CSS0043196 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D003555 3.3e-06 56.2 92 32.6
CANSAT80G1236 Cannabis sativa HOM05D000824 ORTHO05D003555 3.3e-06 56.2 241 24.5
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 3.3e-06 56.2 70 34.3
Actinidia16130 Actinidia chinensis HOM05D000824 ORTHO05D003555 4.3e-06 55.8 200 23.5
A09p07190 Brassica napus HOM05D000824 ORTHO05D003555 4.3e-06 55.8 238 24.4
CiPaw.11G054100 Carya illinoinensis HOM05D000824 ORTHO05D003555 4.3e-06 55.8 236 22.5
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-06 55.8 92 32.6
TAR625G0518 Trochodendron aralioides HOM05D000824 ORTHO05D010384 4.3e-06 55.8 160 28.1
C07p44760 Brassica napus HOM05D000824 ORTHO05D003555 5.7e-06 55.5 84 34.5
AUR62008537 Chenopodium quinoa HOM05D000824 ORTHO05D003555 5.7e-06 55.5 80 36.2
Duzib205G0152 Durio zibethinus HOM05D000824 ORTHO05D003555 5.7e-06 55.5 199 24.6
Thhalv10003822m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 5.7e-06 55.5 201 24.9
Hma1.2p1_0060F.1_g033050 Hydrangea macrophylla HOM05D000824 ORTHO05D003555 5.7e-06 55.5 235 21.3
QL10p019699 Quercus lobata HOM05D000824 ORTHO05D003555 5.7e-06 55.5 203 24.6
BcaB08g37297 Brassica carinata HOM05D000824 ORTHO05D003555 7.4e-06 55.1 199 26.6
Nitab4.5_0002427g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.4e-06 55.1 180 26.1
Potri.015G057300 Populus trichocarpa HOM05D000824 ORTHO05D003555 7.4e-06 55.1 88 34.1
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-06 55.1 90 27.8
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 9.7e-06 54.7 89 28.1
SGA_v2.0_scaffold28G11745 Striga asiatica HOM05D000824 ORTHO05D003555 9.7e-06 54.7 237 21.9
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-06 54.7 176 22.2


User provided reference genes

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