Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1358.2 705 100.0
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.1e-221 771.9 721 63.4
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 5.8e-215 751.5 736 59.2
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 1.2e-209 733.8 729 60.6
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 3.6e-209 732.3 746 58.7
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 1.6e-201 706.8 759 56.7
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 1.4e-200 703.7 745 56.5
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 3.6e-193 679.1 747 55.0
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 3.6e-193 679.1 749 55.3
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 2.4e-192 676.4 745 54.6
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 2.2e-190 669.8 744 54.4
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 3.2e-189 666.0 748 57.0
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.5e-186 657.1 721 57.8
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 2.8e-185 652.9 738 53.9
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 3.8e-182 642.5 747 53.7
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 1.3e-179 634.0 752 52.0
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 2.1e-177 626.7 730 55.8
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 8.5e-174 614.8 743 51.8
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 1.8e-171 607.1 748 51.6
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 6.7e-171 605.1 750 50.7
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 6.9e-168 595.1 745 51.3
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 4.2e-165 585.9 746 51.2
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 5.5e-165 585.5 745 50.5
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 6.1e-164 582.0 745 50.2
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.4e-163 580.9 745 50.2
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 2.3e-163 580.1 833 45.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 1.1e-162 577.8 735 50.5
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 1.2e-159 567.8 735 49.3
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 6.7e-155 552.0 741 49.8
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 7.4e-154 548.5 743 48.5
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 2.4e-152 543.5 735 48.0
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 3.1e-152 543.1 731 50.1
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 3.5e-151 539.7 747 48.9
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 5.5e-149 532.3 729 48.4
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.2e-148 531.2 453 65.8
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 2.1e-148 530.4 782 46.7
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 1.1e-144 518.1 740 48.0
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 5.3e-144 515.8 717 49.8
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 5.9e-143 512.3 721 48.4
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 1.2e-140 504.6 737 46.3
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 1.6e-140 504.2 810 43.7
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 2.7e-140 503.4 752 46.3
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 3.6e-140 503.1 736 46.9
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 1.0e-139 501.5 737 46.7
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 6.8e-139 498.8 755 47.2
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 8.8e-139 498.4 814 43.7
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 3.4e-138 496.5 721 47.3
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 9.8e-138 495.0 733 45.7
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 4.8e-137 492.7 736 45.9
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.4e-136 491.1 705 48.4
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 1.2e-135 488.0 745 45.8
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.2e-135 488.0 711 47.5
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 2.7e-135 486.9 735 44.9
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 1.7e-134 484.2 737 44.6
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 1.2e-132 478.0 488 57.0
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 3.6e-132 476.5 752 45.1
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 1.8e-131 474.2 707 47.0
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 5.7e-130 469.2 734 45.6
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 1.0e-126 458.4 826 41.9
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 1.7e-126 457.6 830 41.4
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 8.6e-126 455.3 717 45.6
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 4.7e-124 449.5 721 45.6
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 7.8e-119 432.2 709 44.9
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 1.1e-117 428.3 561 48.8
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 5.6e-117 426.0 702 45.4
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 5.6e-117 426.0 536 50.7
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 8.0e-116 422.2 750 41.6
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 7.5e-114 415.6 786 40.1
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 1.7e-113 414.5 744 42.1
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 1.2e-106 391.7 700 44.1
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 3.8e-97 360.1 714 38.4
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 2.4e-96 357.5 326 64.1
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 1.3e-94 351.7 443 49.4
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.2e-87 328.6 767 36.9
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 3.9e-86 323.6 708 37.7
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 7.6e-82 309.3 719 37.6
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.1e-75 288.9 457 44.6
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.6e-74 284.3 839 32.1
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 3.0e-54 217.6 196 64.8
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 3.9e-54 217.2 252 54.4
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 5.1e-54 216.9 252 55.2
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 1.3e-52 212.2 270 52.2
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 3.7e-52 210.7 267 52.1
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 1.7e-49 201.8 146 72.6
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 4.7e-47 193.7 351 40.5
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 4.4e-45 187.2 191 56.5
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 4.8e-44 183.7 440 33.6
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 4.1e-35 154.1 270 44.8
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.9e-32 145.2 131 61.8
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 8.2e-28 129.8 341 30.5
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 3.0e-14 84.7 71 60.6
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 1.2e-10 72.8 236 30.9
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 7.3e-08 63.5 53 73.6
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.8e-06 58.9 76 39.5


User provided reference genes

Program Settings