Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1764.6 955 100.0
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1321.6 952 78.3
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1320.1 967 75.8
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1304.3 951 77.2
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1278.8 818 86.8
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1278.5 955 75.6
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1239.9 957 73.1
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1233.0 884 78.3
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1231.5 959 73.5
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1222.6 915 75.3
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1207.6 959 71.5
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 1201.4 918 74.7
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1186.4 956 70.7
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1181.8 953 70.5
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1172.1 950 70.8
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1171.0 955 70.1
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1167.9 956 70.1
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1162.5 954 69.9
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1156.4 954 70.1
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1156.0 962 69.5
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1152.9 947 69.2
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1149.4 1099 62.8
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1143.3 957 68.9
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1138.3 953 68.9
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1133.6 953 68.6
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1123.6 962 68.8
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1116.7 959 66.4
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1113.2 960 66.5
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1112.8 960 66.7
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1110.5 959 66.9
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1104.7 951 66.8
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1102.8 961 67.2
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1099.7 960 65.9
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1097.4 960 65.5
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1093.6 956 67.5
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1084.7 961 66.9
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1075.5 955 64.7
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 6.5e-312 1074.7 983 65.2
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 2.9e-310 1068.5 918 66.4
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 1.4e-309 1066.2 957 65.4
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 1.2e-308 1063.1 951 65.1
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 4.6e-308 1061.2 951 66.0
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 7.9e-308 1060.4 962 64.1
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 1.0e-307 1060.1 911 67.0
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 1.0e-307 1060.1 960 64.4
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 1.8e-307 1059.3 950 65.6
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.1e-306 1056.6 911 66.8
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.1e-306 1056.6 911 66.7
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 1.5e-306 1056.2 960 64.5
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 3.3e-306 1055.0 963 65.7
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 4.3e-306 1054.7 964 64.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 9.6e-306 1053.5 953 64.2
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 2.8e-305 1052.0 741 80.0
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 2.8e-305 1052.0 960 64.3
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 3.1e-304 1048.5 957 65.9
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 9.0e-304 1047.0 962 64.3
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 1.2e-303 1046.6 957 66.2
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.5e-303 1046.2 913 65.7
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 2.2e-302 1042.3 916 66.0
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 1.2e-300 1036.6 956 64.9
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 1.8e-299 1032.7 957 62.9
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 7.4e-298 1027.3 775 74.7
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.8e-297 1025.4 954 62.8
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 3.1e-296 1021.9 957 63.3
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 5.3e-296 1021.1 963 63.6
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 6.9e-296 1020.8 955 64.2
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 1.7e-294 1016.1 955 64.8
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 5.0e-294 1014.6 954 63.0
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 3.9e-291 1005.0 914 64.4
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 4.1e-280 968.4 744 75.1
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 4.4e-274 948.3 996 59.5
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 2.9e-270 935.6 960 60.9
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 2.8e-265 919.1 967 56.0
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.5e-245 853.6 743 69.0
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 3.0e-238 829.3 776 64.0
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 2.1e-236 823.2 740 66.2
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.8e-220 769.6 887 54.0
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.9e-216 756.9 969 51.3
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 4.6e-215 752.3 756 60.7
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.8e-190 670.6 678 62.4
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 5.9e-186 655.6 871 47.5
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 2.9e-185 653.3 470 78.5
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 2.3e-174 617.1 1069 41.9
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.9e-161 573.5 840 44.6
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.5e-160 571.2 571 61.3
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.3e-116 422.5 732 43.6
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.2e-101 375.6 749 39.0
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 7.6e-85 319.7 307 65.1
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.2e-83 314.3 258 64.3
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 2.5e-75 288.1 238 65.1
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 2.5e-75 288.1 214 72.0
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 9.1e-62 243.0 235 56.2
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.5e-51 207.2 165 67.9
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.7e-47 195.7 170 61.8
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.2e-47 193.4 152 78.3
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.2e-47 193.4 292 47.3
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-35 155.2 258 38.4
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 9.4e-35 153.3 96 88.5
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.0e-33 148.3 241 46.5
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 4.8e-31 141.0 114 67.5
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 4.1e-30 137.9 828 25.6
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 2.5e-27 128.6 160 44.4
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 2.8e-26 125.2 228 34.2
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-23 114.8 106 58.5
Actinidia09210 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.0e-21 109.0 209 41.6
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 2.3e-20 105.5 279 28.3
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 6.1e-18 97.4 148 55.4
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 7.5e-16 90.5 85 61.2
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-13 82.0 71 49.3


User provided reference genes

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