Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10670 Davidia involucrata HOM05D004222 ORTHO05D004982 1.1e-73 280.0 159 100.0
Dinv15742 Davidia involucrata HOM05D004222 ORTHO05D004982 2.7e-64 248.8 157 82.8
vmacro16353 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 3.4e-62 241.9 157 79.0
Rhsim08G0239600 Rhododendron simsii HOM05D004222 ORTHO05D004982 6.3e-61 237.7 157 77.1
vmacro15039 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 1.1e-60 236.9 157 77.1
Rhsim01G0228800 Rhododendron simsii HOM05D004222 ORTHO05D004982 4.1e-60 235.0 157 77.1
Manes.11G019600 Manihot esculenta HOM05D004222 ORTHO05D004982 7.0e-60 234.2 157 78.3
CSS0031925 Camellia sinensis var. sinensis HOM05D004222 ORTHO05D004982 9.1e-60 233.8 158 77.2
CiPaw.01G218100 Carya illinoinensis HOM05D004222 ORTHO05D004982 2.0e-59 232.6 132 87.9
Actinidia21792 Actinidia chinensis HOM05D004222 ORTHO05D004982 3.5e-59 231.9 157 77.7
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 3.5e-59 231.9 157 78.3
Cfa003517 Carpinus fangiana HOM05D004222 ORTHO05D004982 4.5e-59 231.5 157 76.4
Haze_16054 Corylus avellana HOM05D004222 ORTHO05D004982 4.5e-59 231.5 157 76.4
Potri.001G168300 Populus trichocarpa HOM05D004222 ORTHO05D004982 1.3e-58 229.9 159 75.5
Sabra01G0142300 Salix brachista HOM05D004222 ORTHO05D004982 2.3e-58 229.2 159 75.5
QL05p004213 Quercus lobata HOM05D004222 ORTHO05D004982 2.9e-58 228.8 157 77.1
Hma1.2p1_0074F.1_g038830 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 3.8e-58 228.4 157 77.1
Hma1.2p1_3000F.1_g331525 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 3.8e-58 228.4 157 77.1
Nn2g10347 Nelumbo nucifera HOM05D004222 ORTHO05D004982 6.6e-58 227.6 155 78.7
Manes.04G145400 Manihot esculenta HOM05D004222 ORTHO05D004982 1.1e-57 226.9 157 74.5
Prupe.3G039800 Prunus persica HOM05D004222 ORTHO05D004982 1.5e-57 226.5 132 87.1
CsaV3_7G034430 Cucumis sativus L. HOM05D004222 ORTHO05D004982 1.9e-57 226.1 132 84.8
GSVIVG01016750001 Vitis vinifera HOM05D004222 ORTHO05D004982 1.9e-57 226.1 132 86.4
TAR383G0284 Trochodendron aralioides HOM05D004222 ORTHO05D004982 2.5e-57 225.7 155 76.8
Duzib235G1272 Durio zibethinus HOM05D004222 ORTHO05D004982 3.3e-57 225.3 157 75.2
Cc02_g29210 Coffea canephora HOM05D004222 ORTHO05D004982 4.2e-57 224.9 154 74.7
MELO3C024352.2 Cucumis melo HOM05D004222 ORTHO05D004982 4.2e-57 224.9 132 84.1
MD09G1181700 Malus domestica HOM05D004222 ORTHO05D004982 4.2e-57 224.9 131 87.0
Eucgr.G03389 Eucalyptus grandis HOM05D004222 ORTHO05D004982 5.5e-57 224.6 157 73.2
Gohir.A10G053600 Gossypium hirsutum HOM05D004222 ORTHO05D004982 9.5e-57 223.8 131 85.5
Gorai.011G059100 Gossypium raimondii HOM05D004222 ORTHO05D004982 9.5e-57 223.8 131 85.5
Lj9A532G68 Lonicera japonica HOM05D004222 ORTHO05D004982 9.5e-57 223.8 157 74.5
Lj9C524T6 Lonicera japonica HOM05D004222 ORTHO05D004982 9.5e-57 223.8 157 74.5
Actinidia32191 Actinidia chinensis HOM05D004222 ORTHO05D004982 1.6e-56 223.0 132 84.8
CiPaw.02G135300 Carya illinoinensis HOM05D004222 ORTHO05D004982 6.1e-56 221.1 157 75.2
Eucgr.H02488 Eucalyptus grandis HOM05D004222 ORTHO05D004982 6.1e-56 221.1 157 73.2
Peaxi162Scf00528g00226 Petunia axillaris HOM05D004222 ORTHO05D004982 6.1e-56 221.1 132 87.1
TAR626G0656 Trochodendron aralioides HOM05D004222 ORTHO05D004982 6.1e-56 221.1 130 83.8
Gohir.D10G055400 Gossypium hirsutum HOM05D004222 ORTHO05D004982 8.0e-56 220.7 131 84.7
TWI31G0208 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 8.0e-56 220.7 156 75.6
Lsat_1_v5_gn_4_74980 Lactuca sativa HOM05D004222 ORTHO05D004982 1.0e-55 220.3 157 72.6
FvH4_6g34870 Fragaria vesca HOM05D004222 ORTHO05D004982 1.4e-55 219.9 157 73.2
FAN14G1002 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.4e-55 219.9 157 73.2
RcHm_v2.0_Chr2g0145741 Rosa chinensis HOM05D004222 ORTHO05D004982 2.3e-55 219.2 157 72.6
ClCG09G000990 Citrullus lanatus HOM05D004222 ORTHO05D004982 3.0e-55 218.8 127 85.8
Solyc04g010090.3 Solanum lycopersicum HOM05D004222 ORTHO05D004982 3.0e-55 218.8 133 85.0
Sopen04g005230 Solanum pennellii HOM05D004222 ORTHO05D004982 3.0e-55 218.8 133 85.0
Ciclev10026608m.g Citrus clementina HOM05D004222 ORTHO05D004982 4.0e-55 218.4 132 81.1
ECA232G1089 Erigeron canadensis HOM05D004222 ORTHO05D004982 4.0e-55 218.4 157 72.0
PGR031G1684 Punica granatum HOM05D004222 ORTHO05D004982 4.0e-55 218.4 156 74.4
Sc16g0009040 Simmondsia chinensis HOM05D004222 ORTHO05D004982 4.0e-55 218.4 131 83.2
FAN09G4904 Fragaria x ananassa HOM05D004222 ORTHO05D004982 5.2e-55 218.0 157 72.6
Sp1g40590 Schrenkiella parvula HOM05D004222 ORTHO05D004982 5.2e-55 218.0 130 83.1
EL10Ac4g09456 Beta vulgaris HOM05D004222 ORTHO05D004982 6.8e-55 217.6 132 81.8
CARHR044490 Cardamine hirsuta HOM05D004222 ORTHO05D004982 6.8e-55 217.6 130 83.1
AUR62006751 Chenopodium quinoa HOM05D004222 ORTHO05D004982 6.8e-55 217.6 132 81.1
Nitab4.5_0003780g0070 Nicotiana tabacum HOM05D004222 ORTHO05D004982 6.8e-55 217.6 132 85.6
Nitab4.5_0006737g0050 Nicotiana tabacum HOM05D004222 ORTHO05D004982 6.8e-55 217.6 132 85.6
Oeu026248.1 Olea europaea HOM05D004222 ORTHO05D004982 6.8e-55 217.6 133 82.7
TWI75G1350 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 6.8e-55 217.6 132 83.3
CANSAT64G2454 Cannabis sativa HOM05D004222 ORTHO05D004982 8.9e-55 217.2 133 82.0
Thhalv10012402m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 8.9e-55 217.2 128 84.4
FAN02G1508 Fragaria x ananassa HOM05D004222 ORTHO05D004982 8.9e-55 217.2 157 72.6
THA.LOC104810368 Tarenaya hassleriana HOM05D004222 ORTHO05D004982 8.9e-55 217.2 128 82.8
CAN.G786.39 Capsicum annuum HOM05D004222 ORTHO05D004982 1.2e-54 216.9 155 78.1
AUR62000395 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.2e-54 216.9 132 80.3
Oeu043649.1 Olea europaea HOM05D004222 ORTHO05D004982 1.2e-54 216.9 133 83.5
Thecc.06G121100 Theobroma cacao HOM05D004222 ORTHO05D004982 1.5e-54 216.5 157 71.3
Atru.chr1.3997 Acer truncatum HOM05D004222 ORTHO05D004982 2.0e-54 216.1 132 81.1
A08p01190 Brassica napus HOM05D004222 ORTHO05D004982 2.0e-54 216.1 130 83.1
BraA08t32170Z Brassica rapa HOM05D004222 ORTHO05D004982 2.0e-54 216.1 130 83.1
DCAR_002631 Daucus carota HOM05D004222 ORTHO05D004982 2.0e-54 216.1 132 81.8
Ciclev10032895m.g Citrus clementina HOM05D004222 ORTHO05D004982 2.6e-54 215.7 132 82.6
PGSC0003DMG400011493 Solanum tuberosum HOM05D004222 ORTHO05D004982 2.6e-54 215.7 133 84.2
AT1G54140 Arabidopsis thaliana HOM05D004222 ORTHO05D004982 3.4e-54 215.3 128 83.6
BolC3t21520H Brassica oleracea HOM05D004222 ORTHO05D004982 3.4e-54 215.3 130 82.3
Carub.0001s4338 Capsella rubella HOM05D004222 ORTHO05D004982 3.4e-54 215.3 130 81.5
BcaB04g17022 Brassica carinata HOM05D004222 ORTHO05D004982 4.4e-54 214.9 130 83.1
BcaC01g01437 Brassica carinata HOM05D004222 ORTHO05D004982 4.4e-54 214.9 130 82.3
C03p92020 Brassica napus HOM05D004222 ORTHO05D004982 4.4e-54 214.9 130 82.3
Cc04_g01280 Coffea canephora HOM05D004222 ORTHO05D004982 4.4e-54 214.9 154 71.4
AL1G62860 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 7.5e-54 214.2 128 82.8
Aqoxy5G01362 Aquilegia oxysepala HOM05D004222 ORTHO05D004982 1.7e-53 213.0 126 83.3
ECA232G2519 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.7e-53 213.0 156 71.8
arahy.Tifrunner.gnm1.ann1.J7IGQN Arachis hypogaea HOM05D004222 ORTHO05D004982 2.2e-53 212.6 159 69.2
arahy.Tifrunner.gnm1.ann1.M5IJ04 Arachis hypogaea HOM05D004222 ORTHO05D004982 2.2e-53 212.6 159 69.2
Glyma.17G037200 Glycine max HOM05D004222 ORTHO05D004982 2.9e-53 212.2 155 71.6
COL.COLO4_30749 Corchorus olitorius HOM05D004222 ORTHO05D004982 6.3e-53 211.1 129 81.4
SGA_v2.0_scaffold4G02066 Striga asiatica HOM05D004222 ORTHO05D004982 6.3e-53 211.1 163 69.3
SGA_v2.0_scaffold68G22854 Striga asiatica HOM05D004222 ORTHO05D004982 6.3e-53 211.1 133 82.0
Glyma.07G236200 Glycine max HOM05D004222 ORTHO05D004982 8.3e-53 210.7 133 79.7
PSO135G0791 Papaver somniferum HOM05D004222 ORTHO05D004982 1.1e-52 210.3 157 70.1
DCAR_023344 Daucus carota HOM05D004222 ORTHO05D004982 1.8e-52 209.5 132 78.0
Lj4g0027352 Lotus japonicus HOM05D004222 ORTHO05D004982 2.4e-52 209.1 159 69.8
Sed0002362 Sechium edule HOM05D004222 ORTHO05D004982 2.4e-52 209.1 131 80.9
MSTRG.9521 Avicennia marina HOM05D004222 ORTHO05D004982 3.2e-52 208.8 129 79.8
Lalb_Chr13g0298711 Lupinus albus HOM05D004222 ORTHO05D004982 3.2e-52 208.8 133 79.7
AL1G63010 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 4.1e-52 208.4 128 81.2
BcaC08g44165 Brassica carinata HOM05D004222 ORTHO05D004982 9.2e-52 207.2 130 79.2
PGR042G1688 Punica granatum HOM05D004222 ORTHO05D004982 1.2e-51 206.8 131 77.1
PSO724G0032 Papaver somniferum HOM05D004222 ORTHO05D004982 1.6e-51 206.5 127 80.3
Migut.I01080 Erythranthe guttata HOM05D004222 ORTHO05D004982 3.5e-51 205.3 163 67.5
Phvul.008G203400 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 4.6e-51 204.9 159 66.7
Ah.04g158670 Amaranthus hybridus HOM05D004222 ORTHO05D004982 5.9e-51 204.5 132 77.3
Ca_21404_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.3e-50 203.4 133 75.9
Ca_21419_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.3e-50 203.4 133 75.9
SalBow6G6030 Salvia bowleyana HOM05D004222 ORTHO05D004982 2.3e-50 202.6 158 67.7
Medtr4g123000 Medicago truncatula HOM05D004222 ORTHO05D004982 2.9e-50 202.2 159 67.9
SalBow6G3336 Salvia bowleyana HOM05D004222 ORTHO05D004982 2.9e-50 202.2 132 78.0
unitig_699.g19654 Utricularia gibba HOM05D004222 ORTHO05D004982 2.9e-50 202.2 126 77.8
VMungo0647G2371 Vigna mungo HOM05D004222 ORTHO05D004982 2.9e-50 202.2 159 66.7
Medtr3g015130 Medicago truncatula HOM05D004222 ORTHO05D004982 3.9e-50 201.8 159 67.9
Phvul.003G118200 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 3.9e-50 201.8 124 79.8
C06p15670 Brassica napus HOM05D004222 ORTHO05D004982 5.0e-50 201.4 130 77.7
BolC6t36754H Brassica oleracea HOM05D004222 ORTHO05D004982 5.0e-50 201.4 130 77.7
ATR0598G103 Amborella trichopoda HOM05D004222 ORTHO05D004982 8.6e-50 200.7 152 65.8
SalBow6G2027 Salvia bowleyana HOM05D004222 ORTHO05D004982 8.6e-50 200.7 132 77.3
MBI05_g15473_MAGBIO Magnolia biondii HOM05D004222 ORTHO05D004982 1.5e-49 199.9 132 76.5
Glyma.02G277500 Glycine max HOM05D004222 ORTHO05D004982 1.9e-49 199.5 159 64.8
Aa31LG10G1270 Aethionema arabicum HOM05D004222 ORTHO05D004982 2.5e-49 199.1 127 80.3
CDE08G1040 Ceratophyllum demersum HOM05D004222 ORTHO05D004982 1.0e-47 193.7 127 76.4
TPR.G18581 Trifolium pratense HOM05D004222 ORTHO05D004982 1.4e-47 193.4 159 64.2
BcaB02g10859 Brassica carinata HOM05D004222 ORTHO05D004982 2.3e-47 192.6 132 75.0
Psat0s1953g0320 Pisum sativum HOM05D004222 ORTHO05D004982 4.0e-47 191.8 162 61.7
SEGI_03819 Sequoiadendron giganteum HOM05D004222 ORTHO05D004982 5.2e-47 191.4 125 75.2
Ah.06g195960 Amaranthus hybridus HOM05D004222 ORTHO05D004982 5.8e-46 188.0 132 71.2
SHI11210 Sapria himalayana HOM05D004222 ORTHO05D004982 1.7e-45 186.4 125 73.6
Atru.chr1.2991 Acer truncatum HOM05D004222 ORTHO05D004982 1.1e-44 183.7 121 75.2
HPP92_016607 Vanilla planifolia HOM05D004222 ORTHO05D004982 4.1e-44 181.8 132 70.5
HanXRQChr09g0262591 Helianthus annuus HOM05D004222 ORTHO05D004982 9.2e-44 180.6 102 86.3
Pp3c19_19770 Physcomitrium patens HOM05D004222 ORTHO05D004982 6.6e-42 174.5 130 67.7
Os03g0408500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 5.6e-41 171.4 127 70.9
SMO340G0157 Selaginella moellendorffii HOM05D004222 ORTHO05D004982 5.6e-41 171.4 125 64.0
Zm00001eb019630 Zea mays HOM05D004222 ORTHO05D004982 7.3e-41 171.0 127 70.9
Zm00001eb392970 Zea mays HOM05D004222 ORTHO05D004982 7.3e-41 171.0 127 70.9
VMungo1215G2100 Vigna mungo HOM05D004222 ORTHO05D004982 9.5e-41 170.6 199 50.3
Mapoly0152s0015 Marchantia polymorpha HOM05D004222 ORTHO05D004982 1.4e-39 166.8 125 66.4
CBR_g52315 Chara braunii HOM05D004222 ORTHO05D004982 3.1e-39 165.6 124 65.3
AagrBONN_evm.TU.Sc2ySwM_117.372 Anthoceros agrestis HOM05D004222 ORTHO05D004982 8.3e-37 157.5 130 62.3
AUR62029931 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.5e-33 146.7 97 76.3
AUR62033567 Chenopodium quinoa HOM05D004222 ORTHO05D004982 5.2e-31 138.3 86 81.4
AUR62043147 Chenopodium quinoa HOM05D004222 ORTHO05D004982 9.9e-30 134.0 86 77.9
Thhalv10029376m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 1.4e-28 130.2 90 74.4
Cc02_g29240 Coffea canephora HOM05D004222 ORTHO05D004982 1.2e-27 127.1 95 68.4
Eucgr.J01267 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.2e-27 127.1 161 47.8
TPR.G12685 Trifolium pratense HOM05D004222 ORTHO05D004982 1.3e-26 123.6 89 73.0
Ah.06g188160 Amaranthus hybridus HOM05D000059 ORTHO05D004982 3.9e-26 122.1 83 69.9
Duzib160G0511 Durio zibethinus HOM05D004222 ORTHO05D004982 8.6e-26 120.9 112 61.6
C06p09920 Brassica napus HOM05D004222 ORTHO05D004982 1.9e-25 119.8 103 63.1
HanXRQChr14g0440851 Helianthus annuus HOM05D004222 ORTHO05D004982 4.3e-25 118.6 132 50.0
PRCOL_00004328 Prasinoderma coloniale HOM05D004222 ORTHO05D004982 5.8e-22 108.2 127 49.6
BcaC08g43594 Brassica carinata HOM05D004222 ORTHO05D004982 6.4e-21 104.8 68 77.9
BolC6t36064H Brassica oleracea HOM05D004222 ORTHO05D004982 6.4e-21 104.8 68 77.9
Cre07.g353350 Chlamydomonas reinhardtii HOM05D004222 ORTHO05D004982 1.0e-18 97.4 118 44.1
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 1.4e-15 87.0 105 43.8
Os07g0612500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 3.4e-14 82.4 125 36.0
FAN05G5041 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.3e-13 80.5 71 59.2
unitig_52.g17107 Utricularia gibba HOM05D004222 ORTHO05D004982 1.3e-13 80.5 73 57.5
TPR.G10895 Trifolium pratense HOM05D004222 ORTHO05D004982 1.4e-12 77.0 46 78.3
Medtr6g027990 Medicago truncatula HOM05D004222 ORTHO05D004982 4.2e-12 75.5 65 60.0
MCO04G196 Micromonas commoda HOM05D004222 ORTHO05D004982 7.1e-12 74.7 90 41.1
Nitab4.5_0018373g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 1.6e-11 73.6 78 52.6
AUR62034601 Chenopodium quinoa HOM05D004222 ORTHO05D004982 8.7e-10 67.8 46 76.1
CARHR038570 Cardamine hirsuta HOM05D004222 ORTHO05D004982 2.8e-08 62.8 55 60.0
ECA238G1237 Erigeron canadensis HOM05D004222 ORTHO05D004982 8.1e-08 61.2 124 39.5


User provided reference genes

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