Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 2.7e-258 894.8 446 100.0
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 4.6e-210 734.6 459 78.6
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 6.0e-210 734.2 445 80.7
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 2.9e-204 715.3 447 79.2
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 7.2e-203 710.7 446 78.5
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 1.6e-202 709.5 447 80.1
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 4.6e-202 708.0 450 79.1
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 1.8e-201 706.1 447 78.7
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 3.9e-201 704.9 447 78.7
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 1.1e-200 703.4 447 75.8
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 3.8e-196 688.3 445 75.3
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 8.5e-196 687.2 446 73.5
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 1.9e-195 686.0 450 74.2
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 4.7e-194 681.4 445 74.6
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 3.0e-193 678.7 445 74.2
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 6.7e-193 677.6 445 74.2
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 4.8e-191 671.4 451 73.6
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.2e-189 666.8 446 74.4
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 2.0e-189 666.0 442 75.1
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 5.9e-189 664.5 445 73.9
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 7.7e-189 664.1 467 71.1
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 7.7e-189 664.1 451 74.9
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 7.7e-189 664.1 448 75.7
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 6.5e-188 661.0 447 73.8
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 5.5e-187 657.9 441 74.4
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 9.4e-187 657.1 446 73.8
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 1.2e-186 656.8 446 73.8
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 2.1e-186 656.0 450 69.6
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 2.7e-186 655.6 446 74.4
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 3.6e-186 655.2 449 72.2
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 2.3e-185 652.5 453 71.5
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 8.8e-185 650.6 427 77.5
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 7.4e-184 647.5 449 73.5
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.7e-183 646.4 447 70.2
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 2.8e-183 645.6 448 71.2
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 2.8e-183 645.6 443 71.6
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 3.7e-183 645.2 448 72.8
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 8.2e-183 644.0 468 68.4
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 2.4e-182 642.5 447 70.0
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 4.1e-182 641.7 448 72.8
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 7.0e-182 641.0 448 72.5
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 1.6e-181 639.8 482 67.6
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 2.0e-181 639.4 461 67.9
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 5.9e-181 637.9 495 64.6
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.3e-180 636.7 443 71.6
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 2.9e-180 635.6 448 72.1
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 5.0e-180 634.8 488 66.2
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 1.1e-179 633.6 453 67.5
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 3.6e-178 628.6 448 68.5
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 4.7e-178 628.2 445 69.9
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 1.4e-177 626.7 445 67.4
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 2.3e-177 625.9 451 67.2
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 2.3e-177 625.9 451 67.2
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 1.2e-176 623.6 451 67.2
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 4.4e-176 621.7 451 66.7
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.8e-175 619.0 447 67.1
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 6.3e-175 617.8 445 67.4
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.6e-173 613.2 457 67.6
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 5.9e-173 611.3 451 66.3
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 3.8e-172 608.6 445 67.0
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 9.4e-171 604.0 427 69.6
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 1.8e-169 599.7 458 65.9
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 2.2e-167 592.8 415 70.8
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 4.8e-167 591.7 411 75.2
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 7.0e-166 587.8 527 60.2
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 1.6e-165 586.6 522 57.1
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.3e-164 582.8 550 57.1
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.1e-163 580.5 447 62.4
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 2.3e-161 572.8 447 60.2
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.5e-160 570.1 444 64.4
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.4e-160 568.9 447 59.7
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.4e-158 562.8 436 65.8
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.8e-154 549.3 467 62.1
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 3.6e-154 548.9 428 64.7
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 3.6e-154 548.9 463 60.0
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 4.7e-154 548.5 484 62.2
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 1.1e-150 537.3 400 68.0
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 4.4e-144 515.4 444 58.1
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 2.1e-141 506.5 473 55.8
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 3.5e-141 505.8 336 72.0
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 2.2e-135 486.5 422 62.1
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 5.4e-134 481.9 356 69.7
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.4e-129 467.2 464 54.1
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.7e-125 453.0 409 58.4
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 6.6e-124 448.4 478 47.3
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 2.2e-119 433.3 391 61.1
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 5.3e-113 412.1 453 46.4
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.9e-113 411.8 453 46.4
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 5.8e-112 408.7 333 64.6
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 1.9e-107 393.7 460 43.3
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 2.5e-107 393.3 427 52.5
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 4.8e-106 389.0 304 65.1
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.9e-102 377.1 208 85.1
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.3e-98 364.4 295 62.0
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.4e-96 356.3 267 66.3
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 4.2e-94 349.4 212 77.4
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 3.7e-90 336.3 198 80.8
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 2.4e-89 333.6 198 77.3
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 4.5e-88 329.3 171 88.9
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 7.7e-88 328.6 260 65.4
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.0e-87 328.2 198 75.3
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 4.1e-81 306.2 229 65.9
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.2e-78 296.2 237 62.9
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.3e-76 290.4 168 76.2
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 5.1e-76 289.3 233 60.9
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 5.1e-76 289.3 248 62.5
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 8.8e-76 288.5 228 57.5
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 2.8e-74 283.5 151 90.1
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 8.5e-71 271.9 209 64.6
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 1.7e-66 257.7 170 72.9
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 6.3e-66 255.8 234 53.4
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 1.0e-63 248.4 135 83.7
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.5e-62 244.6 181 66.3
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 2.1e-61 240.7 190 62.6
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 8.0e-61 238.8 203 57.6
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.0e-59 234.2 211 56.9
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.7e-47 194.5 339 35.1
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 2.0e-43 181.0 108 83.3
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 3.9e-39 166.8 261 41.0
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-38 165.2 87 82.8
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 7.0e-33 146.0 274 31.4
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.3e-31 141.0 95 72.6
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 4.3e-30 136.7 239 39.7
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.7e-26 124.8 70 78.6
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 3.7e-18 97.1 219 29.7
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 5.4e-17 93.2 58 81.0
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 4.6e-16 90.1 53 77.4
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.1e-14 85.5 99 46.5
Cre10.g466300 Chlamydomonas reinhardtii HOM05D006173 ORTHO05D007685 3.1e-12 77.4 351 27.4


User provided reference genes

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