Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09709 Davidia involucrata HOM05D003914 ORTHO05D001189 1.4e-54 216.1 112 100.0
Dinv21395 Davidia involucrata HOM05D003914 ORTHO05D001189 4.2e-27 124.8 77 85.7
Lj5A78T80 Lonicera japonica HOM05D003914 ORTHO05D001189 2.9e-20 102.1 77 67.5
Oeu010367.1 Olea europaea HOM05D003914 ORTHO05D001189 8.0e-18 94.0 88 59.1
Actinidia25447 Actinidia chinensis HOM05D003914 ORTHO05D001189 2.2e-15 85.9 77 59.7
CSS0032385 Camellia sinensis var. sinensis HOM05D003914 ORTHO05D001189 2.2e-15 85.9 71 62.0
Cc04_g04890 Coffea canephora HOM05D003914 ORTHO05D001189 2.2e-15 85.9 75 60.0
Peaxi162Scf00332g00329 Petunia axillaris HOM05D003914 ORTHO05D001189 1.8e-14 82.8 67 65.7
DCAR_025582 Daucus carota HOM05D003914 ORTHO05D001189 2.7e-13 79.0 77 54.5
PGSC0003DMG400014195 Solanum tuberosum HOM05D003914 ORTHO05D001189 1.0e-12 77.0 75 54.7
vmacro19039 Vaccinium macrocarpon HOM05D003914 ORTHO05D001189 1.3e-12 76.6 76 56.6
CAN.G407.47 Capsicum annuum HOM05D003914 ORTHO05D001189 1.7e-12 76.3 75 52.0
Nitab4.5_0011117g0010 Nicotiana tabacum HOM05D003914 ORTHO05D001189 1.7e-12 76.3 69 58.0
ECA247G0583 Erigeron canadensis HOM05D003914 ORTHO05D001189 5.0e-12 74.7 75 53.3
Nitab4.5_0001454g0080 Nicotiana tabacum HOM05D003914 ORTHO05D001189 5.0e-12 74.7 68 58.8
Sopen03g036030 Solanum pennellii HOM05D003914 ORTHO05D001189 5.0e-12 74.7 75 53.3
Oeu008404.1 Olea europaea HOM05D003914 ORTHO05D001189 1.1e-11 73.6 107 43.9
Solyc03g117120.4 Solanum lycopersicum HOM05D003914 ORTHO05D001189 1.1e-11 73.6 75 53.3
Rhsim08G0208100 Rhododendron simsii HOM05D003914 ORTHO05D001189 1.5e-11 73.2 76 53.9
SGA_v2.0_scaffold5G02755 Striga asiatica HOM05D003914 ORTHO05D001189 2.7e-10 68.9 75 49.3
MD08G1215300 Malus domestica HOM05D003914 ORTHO05D001189 3.6e-10 68.6 75 57.3
COL.COLO4_26660 Corchorus olitorius HOM05D003914 ORTHO05D001189 6.1e-10 67.8 90 47.8
QL05p034889 Quercus lobata HOM05D003914 ORTHO05D001189 8.0e-10 67.4 91 47.3
Atru.chr10.2393 Acer truncatum HOM05D003914 ORTHO05D001189 1.4e-09 66.6 77 58.4
Haze_16646 Corylus avellana HOM05D003914 ORTHO05D001189 1.4e-09 66.6 75 52.0
MD15G1399200 Malus domestica HOM05D003914 ORTHO05D001189 1.4e-09 66.6 75 57.3
Prupe.2G099100 Prunus persica HOM05D003914 ORTHO05D001189 1.4e-09 66.6 75 57.3
Cfa001895 Carpinus fangiana HOM05D003914 ORTHO05D001189 1.8e-09 66.2 75 52.0
Ciclev10024784m.g Citrus clementina HOM05D003914 ORTHO05D001189 2.3e-09 65.9 70 60.0
Thecc.06G038600 Theobroma cacao HOM05D003914 ORTHO05D001189 2.3e-09 65.9 77 54.5
Migut.I00709 Erythranthe guttata HOM05D003914 ORTHO05D001189 4.0e-09 65.1 77 45.5
HanXRQChr02g0034961 Helianthus annuus HOM05D003914 ORTHO05D001189 4.0e-09 65.1 81 46.9
HanXRQChr03g0080251 Helianthus annuus HOM05D003914 ORTHO05D001189 4.0e-09 65.1 81 46.9
unitig_61.g26230 Utricularia gibba HOM05D003914 ORTHO05D001189 4.0e-09 65.1 77 46.8
CiPaw.01G252800 Carya illinoinensis HOM05D003914 ORTHO05D001189 1.2e-08 63.5 76 48.7
TAR625G0765 Trochodendron aralioides HOM05D003914 ORTHO05D001189 2.0e-08 62.8 72 54.2
TWI12G1414 Tripterygium wilfordii HOM05D003914 ORTHO05D001189 2.6e-08 62.4 78 52.6
CANSAT56G3222 Cannabis sativa HOM05D003914 ORTHO05D001189 5.7e-08 61.2 76 51.3
Duzib235G0729 Durio zibethinus HOM05D003914 ORTHO05D001189 7.5e-08 60.8 77 51.9
TAR381G0103 Trochodendron aralioides HOM05D003914 ORTHO05D001189 1.3e-07 60.1 71 56.3
SalBow7G0967 Salvia bowleyana HOM05D003914 ORTHO05D001189 2.2e-07 59.3 77 48.1
Nn5g28958 Nelumbo nucifera HOM05D003914 ORTHO05D001189 3.7e-07 58.5 88 45.5
Dinv12731 Davidia involucrata HOM05D003914 ORTHO05D181679 4.8e-07 58.2 34 91.2
Psat2g003960 Pisum sativum HOM05D003914 ORTHO05D001189 4.8e-07 58.2 59 55.9
RcHm_v2.0_Chr1g0336931 Rosa chinensis HOM05D003914 ORTHO05D001189 4.8e-07 58.2 75 49.3
AT1G80680 Arabidopsis thaliana HOM05D003914 ORTHO05D001189 1.1e-06 57.0 64 51.6
Gorai.011G089200 Gossypium raimondii HOM05D003914 ORTHO05D001189 1.1e-06 57.0 91 44.0
LjContig00081g0020682 Lotus japonicus HOM05D003914 ORTHO05D001189 1.4e-06 56.6 56 55.4
PSO210G6726 Papaver somniferum HOM05D003914 ORTHO05D001189 1.8e-06 56.2 77 45.5
PSO447G0077 Papaver somniferum HOM05D003914 ORTHO05D001189 1.8e-06 56.2 77 45.5
Lsat_1_v5_gn_1_32000 Lactuca sativa HOM05D003914 ORTHO05D001189 2.4e-06 55.8 69 46.4
SalBow5G0986 Salvia bowleyana HOM05D003914 ORTHO05D001189 2.4e-06 55.8 77 46.8
SalBow5G1255 Salvia bowleyana HOM05D003914 ORTHO05D001189 2.4e-06 55.8 77 46.8
SalBow5G5560 Salvia bowleyana HOM05D003914 ORTHO05D001189 2.4e-06 55.8 77 46.8
Gohir.A10G069101 Gossypium hirsutum HOM05D003914 ORTHO05D001189 3.1e-06 55.5 91 42.9
MBI05_g01294_MAGBIO Magnolia biondii HOM05D003914 ORTHO05D001189 3.1e-06 55.5 80 51.2
Potri.003G180100 Populus trichocarpa HOM05D003914 ORTHO05D001189 4.1e-06 55.1 88 47.7
PGR102G3368 Punica granatum HOM05D003914 ORTHO05D001189 5.4e-06 54.7 51 60.8
Gohir.D10G082300 Gossypium hirsutum HOM05D003914 ORTHO05D001189 7.0e-06 54.3 91 41.8
THA.LOC104812443 Tarenaya hassleriana HOM05D003914 ORTHO05D001189 7.0e-06 54.3 76 51.3
Aqoxy7G03430 Aquilegia oxysepala HOM05D003914 ORTHO05D001189 9.1e-06 53.9 71 54.9


User provided reference genes

Program Settings