Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.2e-180 636.3 312 100.0
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.6e-127 459.1 313 76.0
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.2e-125 451.1 312 75.3
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 6.3e-121 438.0 312 72.1
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 3.1e-112 409.1 312 69.9
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 6.5e-110 401.4 314 67.5
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.4e-107 393.7 315 66.0
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.2e-103 380.6 313 65.2
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 4.0e-99 365.5 313 61.0
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 4.0e-99 365.5 310 62.6
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 3.3e-98 362.5 313 61.0
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 1.3e-97 360.5 313 61.7
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 1.3e-97 360.5 313 59.1
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.1e-96 357.5 314 60.5
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 3.1e-96 355.9 309 61.5
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 5.3e-96 355.1 313 59.7
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 3.5e-95 352.4 311 59.2
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 1.0e-94 350.9 311 58.8
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.7e-94 350.1 311 59.5
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 6.5e-94 348.2 313 59.7
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 5.5e-93 345.1 313 57.8
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.6e-92 342.4 313 59.1
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 5.2e-91 338.6 311 58.8
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 5.2e-91 338.6 312 58.0
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 2.4e-88 329.7 309 57.0
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.1e-88 328.9 308 56.8
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 9.1e-88 327.8 320 57.8
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 2.7e-87 326.2 298 55.7
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 7.7e-87 324.7 308 56.8
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.0e-86 324.3 311 54.7
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.7e-86 323.6 309 54.7
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.2e-86 323.2 317 56.2
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 6.5e-86 321.6 309 56.6
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 8.5e-86 321.2 310 56.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.5e-85 320.5 310 55.8
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.5e-85 319.7 308 56.5
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 4.2e-85 318.9 321 57.6
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.2e-84 317.4 309 56.3
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.2e-84 317.4 309 56.3
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-84 317.0 310 55.5
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.1e-84 316.6 322 55.9
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 6.1e-84 315.1 326 55.2
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 2.3e-83 313.2 312 56.1
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.2e-82 310.8 310 55.2
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.7e-81 307.0 314 54.1
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.8e-81 306.2 266 60.2
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 8.3e-81 304.7 313 55.0
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.1e-80 304.3 327 53.5
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.4e-80 303.9 310 55.8
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 4.1e-80 302.4 314 53.8
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 5.4e-80 302.0 296 54.4
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 9.2e-80 301.2 373 49.1
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 2.0e-79 300.1 305 55.7
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 5.9e-79 298.5 314 55.1
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 5.9e-79 298.5 314 55.1
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 5.9e-79 298.5 314 55.1
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 5.6e-77 292.0 317 52.7
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.2e-76 290.8 313 52.7
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 2.1e-76 290.0 317 52.7
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 3.6e-76 289.3 322 51.2
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 8.0e-76 288.1 327 49.5
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.4e-75 287.3 309 53.7
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.8e-75 287.0 354 47.5
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 4.0e-75 285.8 249 63.5
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 2.0e-74 283.5 307 52.4
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.4e-72 277.3 305 50.8
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 4.1e-72 275.8 311 51.8
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 4.1e-72 275.8 356 45.2
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.2e-71 274.2 306 53.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 5.0e-70 268.9 310 51.9
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 5.6e-69 265.4 368 42.9
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 4.7e-68 262.3 312 50.3
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.8e-67 260.4 325 47.1
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 2.0e-66 256.9 316 45.9
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 5.8e-66 255.4 359 44.0
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 5.8e-66 255.4 304 48.7
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 7.5e-66 255.0 309 47.9
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 3.7e-65 252.7 310 46.8
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 3.7e-65 252.7 384 41.1
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.7e-63 246.5 306 47.4
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 7.8e-63 245.0 304 48.4
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 3.9e-62 242.7 305 48.5
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.6e-62 241.9 202 64.9
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 6.6e-62 241.9 331 42.6
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 8.6e-62 241.5 308 47.1
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.5e-61 240.0 320 46.6
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 3.6e-60 236.1 330 43.3
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 8.9e-59 231.5 130 86.2
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 4.4e-58 229.2 313 47.0
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 9.8e-58 228.0 235 52.8
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 9.8e-58 228.0 298 47.0
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 4.9e-57 225.7 266 50.8
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.9e-56 223.8 309 45.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 1.9e-56 223.8 309 45.0
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.9e-56 223.8 312 43.9
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 3.2e-56 223.0 304 44.4
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 3.2e-56 223.0 323 42.1
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 2.7e-55 219.9 304 44.7
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 2.7e-55 219.9 304 44.7
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 2.7e-55 219.9 304 44.7
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 4.3e-53 212.6 307 43.6
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 5.6e-53 212.2 334 40.1
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 6.2e-52 208.8 232 54.3
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 5.8e-50 202.2 146 71.2
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.6e-47 194.1 299 42.8
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 9.6e-45 184.9 318 42.1
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 1.1e-40 171.4 342 38.9
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 8.1e-28 128.6 84 78.6
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 1.1e-27 128.3 238 37.8
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 9.3e-24 115.2 344 30.2
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.0e-22 111.7 95 58.9
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.3e-20 104.8 76 72.4
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 2.4e-19 100.5 98 48.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 3.4e-18 96.7 81 60.5
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 4.9e-17 92.8 76 60.5
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 8.7e-14 82.0 62 69.4
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 2.4e-11 73.9 81 43.2
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 3.4e-10 70.1 53 62.3
CBR_g41780 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-06 55.8 70 48.6


User provided reference genes

Program Settings