Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.4e-90 335.5 170 100.0
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 2.4e-90 335.5 170 100.0
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.6e-78 296.2 168 88.1
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 6.7e-77 290.8 167 88.0
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 6.7e-77 290.8 167 88.0
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 4.8e-75 284.6 167 87.4
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 6.3e-75 284.3 166 87.3
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 6.3e-75 284.3 167 84.4
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 3.1e-74 282.0 169 83.4
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 4.1e-74 281.6 167 84.4
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 5.3e-74 281.2 169 85.8
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 5.3e-74 281.2 165 87.3
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 4.5e-73 278.1 167 82.6
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 4.5e-73 278.1 166 86.7
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 2.2e-72 275.8 167 83.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 2.9e-72 275.4 168 80.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 5.0e-72 274.6 169 82.2
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 5.0e-72 274.6 168 82.7
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 5.0e-72 274.6 167 83.8
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 8.5e-72 273.9 167 81.4
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.1e-71 273.5 167 83.2
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 3.2e-71 271.9 167 82.6
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 3.2e-71 271.9 172 80.2
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 4.2e-71 271.6 166 81.3
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 5.5e-71 271.2 165 84.2
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 5.5e-71 271.2 167 79.6
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 5.5e-71 271.2 165 83.0
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 9.4e-71 270.4 168 82.1
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 9.4e-71 270.4 164 84.8
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 1.2e-70 270.0 166 80.1
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.6e-70 269.6 167 83.2
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.6e-70 269.6 166 82.5
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 2.1e-70 269.2 165 83.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 2.1e-70 269.2 166 83.1
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 4.7e-70 268.1 166 81.3
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.1e-70 267.7 168 80.4
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 8.0e-70 267.3 165 81.2
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.0e-69 266.9 166 80.1
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.4e-69 266.5 167 79.6
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.4e-69 266.5 166 79.5
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.4e-69 266.5 167 82.0
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.4e-69 266.5 166 81.9
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.4e-69 266.5 166 81.9
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.4e-69 266.5 166 82.5
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.3e-69 265.8 168 79.8
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 2.3e-69 265.8 159 84.9
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.0e-69 265.4 166 81.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.0e-69 265.4 165 79.4
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.2e-69 264.6 162 83.3
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 5.2e-69 264.6 165 79.4
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 6.8e-69 264.2 168 80.4
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.5e-68 263.1 166 78.9
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 2.0e-68 262.7 166 78.9
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.6e-68 262.3 166 78.9
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 2.6e-68 262.3 169 78.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 3.4e-68 261.9 168 79.2
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.4e-68 261.5 182 76.9
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 9.8e-68 260.4 167 79.6
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.8e-68 260.4 167 79.6
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.8e-68 260.4 167 79.6
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.7e-67 259.6 167 79.0
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.2e-67 259.2 167 79.0
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 4.8e-67 258.1 167 79.6
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 6.3e-67 257.7 165 81.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 8.3e-67 257.3 165 80.0
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 4.1e-66 255.0 169 76.3
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 4.1e-66 255.0 167 77.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 9.1e-66 253.8 168 75.6
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.2e-65 253.4 166 78.9
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.2e-65 253.4 177 74.0
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.6e-65 253.1 166 74.7
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.0e-64 250.4 166 76.5
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-64 250.0 176 73.3
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 2.2e-64 249.2 174 73.0
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 2.2e-64 249.2 174 73.0
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 8.5e-64 247.3 177 71.2
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 1.1e-63 246.9 178 70.8
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.5e-63 246.5 175 73.1
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.5e-63 246.5 168 75.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.9e-63 246.1 174 70.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 3.2e-63 245.4 168 75.0
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 4.2e-63 245.0 175 72.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 4.2e-63 245.0 175 72.0
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 4.2e-63 245.0 173 70.5
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 5.5e-63 244.6 167 73.7
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 9.5e-63 243.8 168 75.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.2e-62 243.4 171 74.3
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.2e-62 243.4 171 74.3
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.6e-62 243.0 168 74.4
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 2.7e-62 242.3 177 68.4
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 3.6e-62 241.9 180 70.0
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 3.6e-62 241.9 176 69.9
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 3.6e-62 241.9 180 70.0
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.0e-61 240.4 164 72.6
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 6.8e-61 237.7 153 79.1
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.2e-60 236.9 174 69.0
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.5e-60 236.5 176 67.0
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.8e-59 232.3 165 75.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 6.3e-59 231.1 237 55.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 8.3e-59 230.7 151 76.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.4e-58 229.9 151 78.1
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.0e-57 226.1 168 70.8
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 6.6e-56 221.1 171 66.1
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 4.3e-55 218.4 167 70.7
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.0e-53 211.8 139 74.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 4.0e-53 211.8 133 78.9
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 4.3e-47 191.8 166 60.2
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 5.6e-47 191.4 143 68.5
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.8e-46 189.1 143 67.8
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 3.6e-46 188.7 144 66.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.4e-42 176.8 114 78.1
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.4e-42 176.0 164 56.1
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 4.6e-41 171.8 168 53.6
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.6e-38 163.3 116 72.4
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 7.5e-36 154.5 122 63.1
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 6.4e-35 151.4 164 51.8
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 4.1e-34 148.7 98 77.6
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.5e-31 140.2 79 82.3
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 5.2e-29 131.7 78 82.1
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.0e-28 129.8 73 86.3
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.1e-15 87.4 51 86.3
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 9.0e-13 77.8 112 43.8
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 7.6e-12 74.7 112 42.9
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.9e-07 60.1 33 87.9
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 7.4e-07 58.2 32 87.5


User provided reference genes

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