Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.7e-143 511.9 251 100.0
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.6e-122 443.0 250 87.6
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 7.3e-120 434.1 247 86.2
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.1e-118 430.3 254 83.5
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 2.0e-117 426.0 251 83.7
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.0e-117 426.0 250 82.4
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 2.4e-115 419.1 249 81.9
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 6.0e-114 414.5 246 81.3
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 6.6e-113 411.0 245 80.4
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.1e-112 410.2 252 81.3
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.5e-112 409.8 249 82.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.9e-112 409.5 246 80.5
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.5e-112 409.1 246 81.3
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 2.5e-112 409.1 249 81.9
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.2e-111 406.8 244 82.0
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.6e-111 406.4 249 79.9
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 6.2e-111 404.4 252 80.6
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 6.2e-111 404.4 249 82.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 3.1e-110 402.1 247 81.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 4.0e-110 401.7 249 79.9
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 5.2e-110 401.4 248 80.6
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 6.8e-110 401.0 246 80.1
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.0e-109 399.4 232 83.6
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 4.4e-109 398.3 250 78.8
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.7e-108 396.4 249 76.3
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.7e-108 396.4 249 77.9
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.2e-108 396.0 248 79.0
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 6.4e-108 394.4 246 78.0
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 8.3e-108 394.0 271 74.2
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.2e-107 392.1 249 77.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 4.1e-107 391.7 253 76.7
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 4.1e-107 391.7 231 83.5
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 5.4e-107 391.3 248 77.8
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 9.2e-107 390.6 245 80.0
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 9.2e-107 390.6 255 76.5
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 2.1e-106 389.4 246 78.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 4.6e-106 388.3 255 77.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 7.8e-106 387.5 274 72.3
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.3e-105 386.7 230 82.6
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.7e-105 386.3 254 76.8
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.3e-105 386.0 251 76.9
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.3e-105 386.0 251 76.5
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 5.1e-105 384.8 248 76.6
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.6e-105 384.0 251 76.1
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.5e-104 383.3 254 75.2
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.5e-104 383.3 250 75.2
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.9e-104 382.9 224 84.8
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 1.9e-104 382.9 256 75.8
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.9e-104 382.9 256 75.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.5e-104 382.5 249 74.7
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 3.3e-104 382.1 221 85.1
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 3.3e-104 382.1 239 77.8
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 4.3e-104 381.7 249 76.7
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.6e-104 381.3 255 75.7
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.6e-104 381.3 253 75.9
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 5.6e-104 381.3 252 76.6
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 9.6e-104 380.6 239 78.7
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.2e-103 380.2 237 78.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.8e-103 379.0 252 75.8
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.1e-102 377.1 246 75.2
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.1e-102 377.1 252 75.4
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 5.2e-102 374.8 246 76.8
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 5.8e-101 371.3 242 76.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 7.6e-101 370.9 256 72.3
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 7.6e-101 370.9 314 62.4
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 9.9e-101 370.5 229 77.7
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.3e-100 370.2 239 75.7
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.8e-100 368.6 247 76.5
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 6.4e-100 367.9 239 74.5
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 8.4e-100 367.5 233 76.8
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.1e-99 367.1 257 70.8
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-99 366.7 259 71.0
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.9e-99 366.3 258 71.3
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.9e-99 366.3 247 76.5
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 4.2e-99 365.2 212 84.0
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.2e-98 363.6 240 72.9
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.6e-98 363.2 210 83.3
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 4.6e-98 361.7 325 59.4
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.0e-97 360.5 257 71.2
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.0e-97 360.5 261 70.5
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.0e-97 360.5 261 70.5
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.0e-97 360.5 256 71.5
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.0e-97 360.5 256 71.5
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.3e-97 360.1 255 72.2
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.7e-97 359.8 215 80.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 3.0e-97 359.0 234 75.2
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.1e-96 357.1 257 70.0
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.5e-96 356.7 256 68.8
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 3.3e-96 355.5 265 68.7
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.6e-95 353.2 210 82.9
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.6e-95 353.2 246 69.1
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 2.1e-95 352.8 266 67.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 8.1e-95 350.9 208 82.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 3.1e-94 349.0 208 81.2
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 5.3e-94 348.2 199 86.9
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 5.3e-94 348.2 239 70.7
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 7.6e-93 344.4 231 75.3
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 1.9e-91 339.7 250 69.2
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 9.3e-91 337.4 201 82.1
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 2.1e-90 336.3 170 100.0
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 4.8e-87 325.1 217 73.7
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 3.1e-78 295.8 200 71.5
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 4.2e-75 285.4 335 51.0
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.5e-72 276.2 226 62.4
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 4.1e-70 268.9 174 77.0
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.3e-65 253.1 231 56.3
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 4.5e-61 238.8 155 74.2
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 7.2e-59 231.5 251 49.0
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 3.6e-58 229.2 224 52.7
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 5.9e-53 211.8 139 74.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 5.9e-53 211.8 133 78.9
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.9e-52 209.5 232 49.6
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 8.2e-47 191.4 143 68.5
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 4.1e-46 189.1 143 67.8
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 5.3e-46 188.7 144 66.0
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.6e-45 186.4 113 77.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 2.1e-42 176.8 114 78.1
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 9.7e-40 167.9 174 52.9
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 7.0e-38 161.8 96 81.2
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.1e-35 154.5 122 63.1
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 8.0e-34 148.3 95 77.9
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.2e-31 140.2 79 82.3
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.5e-27 127.5 99 62.6
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.2e-23 113.6 116 56.0
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 5.2e-17 92.4 47 85.1
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 7.0e-14 82.0 195 28.7
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-12 77.8 112 43.8
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-11 74.7 112 42.9
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 1.2e-08 64.7 60 58.3
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 1.4e-06 57.8 40 70.0


User provided reference genes

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