Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 7.3e-169 597.0 283 100.0
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 4.0e-26 122.9 169 35.5
Dinv09222 Davidia involucrata HOM05D025719 ORTHO05D006370 1.6e-19 100.9 102 38.2
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 1.8e-18 97.4 103 39.8
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 3.1e-18 96.7 80 46.2
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 3.1e-18 96.7 106 37.7
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 7.7e-17 92.0 102 36.3
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 1.3e-16 91.3 115 35.7
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 1.1e-15 88.2 100 42.0
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.9e-15 87.4 88 42.0
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 1.2e-14 84.7 105 38.1
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.1e-14 84.0 200 30.0
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 2.7e-14 83.6 97 37.1
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 3.6e-14 83.2 81 37.0
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.6e-14 83.2 200 30.0
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.1e-14 82.4 113 32.7
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-13 80.1 79 40.5
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.9e-13 79.7 124 31.5
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 3.9e-13 79.7 105 35.2
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.1e-13 79.3 85 37.6
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 8.8e-13 78.6 109 33.0
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.8e-13 78.6 109 33.0
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.8e-13 78.6 109 33.0
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.8e-13 78.6 109 33.0
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.5e-12 77.8 85 40.0
Dinv02443 Davidia involucrata HOM05D010100 ORTHO05D006370 2.5e-12 77.0 96 38.5
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.5e-12 77.0 74 44.6
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 3.3e-12 76.6 84 38.1
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 3.3e-12 76.6 77 40.3
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 4.3e-12 76.3 106 34.9
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.4e-12 75.5 100 32.0
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.4e-12 75.5 112 35.7
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.7e-12 75.1 75 36.0
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.7e-12 75.1 83 42.2
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 2.8e-11 73.6 94 36.2
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-11 73.6 91 35.2
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.7e-11 73.2 72 43.1
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.7e-11 73.2 100 36.0
Dinv02985 Davidia involucrata HOM05D005440 ORTHO05D034043 4.8e-11 72.8 58 46.6
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 4.8e-11 72.8 79 38.0
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 4.8e-11 72.8 73 37.0
Dinv38294 Davidia involucrata HOM05D010100 ORTHO05D006370 6.3e-11 72.4 142 30.3
Dinv11541 Davidia involucrata HOM05D013474 ORTHO05D006370 8.2e-11 72.0 67 34.3
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.2e-11 72.0 108 30.6
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 1.4e-10 71.2 100 29.0
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 1.8e-10 70.9 119 27.7
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 2.4e-10 70.5 96 33.3
Dinv07139 Davidia involucrata HOM05D010100 ORTHO05D006370 3.1e-10 70.1 59 45.8
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.1e-10 70.1 99 28.3
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 4.1e-10 69.7 49 49.0
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 4.1e-10 69.7 49 49.0
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 4.1e-10 69.7 137 25.5
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.1e-10 68.6 108 27.8
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.2e-09 68.2 89 33.7
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.5e-09 67.8 106 32.1
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.0e-09 67.4 57 50.9
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.4e-09 66.6 64 43.8
PGSC0003DMG400027282 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.9e-09 65.9 61 47.5
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.3e-08 64.7 97 35.1
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 1.3e-08 64.7 91 37.4
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 1.3e-08 64.7 76 38.2
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 2.9e-08 63.5 78 33.3
PGSC0003DMG400016074 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.8e-08 63.2 85 31.8
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 1.1e-07 61.6 45 55.6
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.4e-07 61.2 86 31.4
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 1.9e-07 60.8 55 41.8
Nn3g19038 Nelumbo nucifera HOM05D008877 ORTHO05D006370 1.9e-07 60.8 84 32.1
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.5e-07 60.5 76 36.8
Dinv11953 Davidia involucrata HOM05D062003 ORTHO05D006370 2.5e-07 60.5 50 48.0
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 2.5e-07 60.5 97 25.8
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.2e-07 59.7 100 29.0
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 4.2e-07 59.7 97 25.8
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.2e-07 59.7 65 40.0
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 5.5e-07 59.3 98 33.7
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 5.5e-07 59.3 80 33.8
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.4e-07 58.5 123 24.4
Medtr1g024800 Medicago truncatula HOM05D002777 ORTHO05D001516 1.6e-06 57.8 126 30.2
Solyc05g017910.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 2.7e-06 57.0 88 26.1
Dinv03777 Davidia involucrata HOM05D012569 ORTHO05D006370 3.6e-06 56.6 49 49.0
Nitab4.5_0009574g0010 Nicotiana tabacum HOM05D006091 ORTHO05D006421 3.6e-06 56.6 75 38.7
Dinv21997 Davidia involucrata HOM05D013474 ORTHO05D011747 4.7e-06 56.2 90 30.0
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 4.7e-06 56.2 94 29.8
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-06 56.2 66 37.9
PGSC0003DMG400043524 Solanum tuberosum HOM05D008032 ORTHO05D000006 6.1e-06 55.8 96 30.2
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 7.9e-06 55.5 94 29.8
PGSC0003DMG400029006 Solanum tuberosum HOM05D000001 ORTHO05D011642 7.9e-06 55.5 75 32.0


User provided reference genes

Program Settings