Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08574 Davidia involucrata HOM05D030419 ORTHO05D185138 7.9e-53 210.3 116 100.0
Dinv08580 Davidia involucrata HOM05D030419 ORTHO05D185451 4.8e-34 147.9 85 94.1
Dinv43499 Davidia involucrata HOM05D030419 ORTHO05D181201 4.8e-34 147.9 85 94.1
Dinv08581 Davidia involucrata HOM05D030419 ORTHO05D182162 1.4e-33 146.4 85 92.9
Dinv39973 Davidia involucrata HOM05D000682 ORTHO05D006241 4.2e-14 81.6 57 75.4
Actinidia19178 Actinidia chinensis HOM05D000104 ORTHO05D006241 4.7e-13 78.2 68 64.7
CSS0036611 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006241 8.0e-13 77.4 66 62.1
Hma1.2p1_0717F.1_g208150 Hydrangea macrophylla HOM05D000104 ORTHO05D006241 3.0e-12 75.5 65 66.2
Cfa004299 Carpinus fangiana HOM05D000104 ORTHO05D006241 1.5e-11 73.2 84 53.6
Haze_15102 Corylus avellana HOM05D000104 ORTHO05D006241 7.5e-11 70.9 68 55.9
Hma1.2p1_0400F.1_g144480 Hydrangea macrophylla HOM05D000104 ORTHO05D006241 2.8e-10 68.9 82 53.7
Phvul.002G029500 Phaseolus vulgaris HOM05D000104 ORTHO05D006241 3.7e-10 68.6 57 56.1
CiPaw.01G036800 Carya illinoinensis HOM05D000104 ORTHO05D006241 6.3e-10 67.8 68 55.9
CANSAT01G0026 Cannabis sativa HOM05D000104 ORTHO05D006241 1.8e-09 66.2 77 49.4
QL06p045767 Quercus lobata HOM05D000104 ORTHO05D006241 1.8e-09 66.2 57 56.1
Glyma.01G175300 Glycine max HOM05D000104 ORTHO05D006241 3.1e-09 65.5 76 48.7
PGSC0003DMG400015477 Solanum tuberosum HOM05D000104 ORTHO05D006241 3.1e-09 65.5 77 48.1
TWI73G0548 Tripterygium wilfordii HOM05D000104 ORTHO05D006241 3.1e-09 65.5 77 53.2
ClCG07G009110 Citrullus lanatus HOM05D000104 ORTHO05D006241 4.1e-09 65.1 75 53.3
EL10Ac6g14940 Beta vulgaris HOM05D000104 ORTHO05D006241 5.4e-09 64.7 75 50.7
CAN.G53.25 Capsicum annuum HOM05D000104 ORTHO05D006241 5.4e-09 64.7 77 46.8
Oeu044136.1 Olea europaea HOM05D000104 ORTHO05D006241 5.4e-09 64.7 66 53.0
Peaxi162Scf00008g03717 Petunia axillaris HOM05D000104 ORTHO05D006241 7.0e-09 64.3 76 47.4
PGR119G0582 Punica granatum HOM05D000104 ORTHO05D006241 7.0e-09 64.3 81 49.4
Atru.chr3.558 Acer truncatum HOM05D000682 ORTHO05D006241 1.2e-08 63.5 76 50.0
Duzib147G0357 Durio zibethinus HOM05D000104 ORTHO05D006241 1.2e-08 63.5 61 55.7
Sopen02g013810 Solanum pennellii HOM05D000104 ORTHO05D006241 1.2e-08 63.5 76 47.4
VMungo1215G1562 Vigna mungo HOM05D000104 ORTHO05D006241 1.2e-08 63.5 73 47.9
vmacro17844 Vaccinium macrocarpon HOM05D000104 ORTHO05D006241 1.6e-08 63.2 85 49.4
Glyma.11G067500 Glycine max HOM05D000104 ORTHO05D006241 2.7e-08 62.4 82 46.3
MELO3C017558.2 Cucumis melo HOM05D000104 ORTHO05D006241 3.5e-08 62.0 75 50.7
Solyc02g062780.4 Solanum lycopersicum HOM05D000104 ORTHO05D006241 3.5e-08 62.0 75 46.7
Manes.01G134600 Manihot esculenta HOM05D000104 ORTHO05D006241 4.5e-08 61.6 65 50.8
MSTRG.15275 Avicennia marina HOM05D000104 ORTHO05D006241 1.0e-07 60.5 65 52.3
Manes.02G092800 Manihot esculenta HOM05D000104 ORTHO05D006241 1.0e-07 60.5 72 52.8
Prupe.7G153400 Prunus persica HOM05D000104 ORTHO05D006241 1.0e-07 60.5 73 50.7
GSVIVG01018979001 Vitis vinifera HOM05D000104 ORTHO05D006241 1.0e-07 60.5 59 55.9
Thecc.01G037200 Theobroma cacao HOM05D000104 ORTHO05D006241 2.3e-07 59.3 71 50.7
COL.COLO4_22093 Corchorus olitorius HOM05D000104 ORTHO05D006241 6.6e-07 57.8 66 53.0
Gorai.008G068400 Gossypium raimondii HOM05D000104 ORTHO05D006241 6.6e-07 57.8 64 53.1
Sed0015545 Sechium edule HOM05D000104 ORTHO05D006241 6.6e-07 57.8 75 50.7
Gohir.A12G065100 Gossypium hirsutum HOM05D000104 ORTHO05D006241 8.6e-07 57.4 64 53.1
Aqoxy5G01651 Aquilegia oxysepala HOM05D000104 ORTHO05D006241 1.5e-06 56.6 76 46.1
Potri.007G026700 Populus trichocarpa HOM05D000104 ORTHO05D006241 1.5e-06 56.6 76 47.4
Nitab4.5_0003233g0020 Nicotiana tabacum HOM05D000104 ORTHO05D006241 1.9e-06 56.2 68 45.6
vmacro01888 Vaccinium macrocarpon HOM05D000104 ORTHO05D006241 1.9e-06 56.2 99 41.4
Lj2g0008105 Lotus japonicus HOM05D000104 ORTHO05D006241 4.2e-06 55.1 93 37.6
PGSC0003DMG400014895 Solanum tuberosum HOM05D000104 ORTHO05D006241 4.2e-06 55.1 65 47.7
DCAR_017263 Daucus carota HOM05D000104 ORTHO05D006241 5.5e-06 54.7 64 45.3
CAN.G358.104 Capsicum annuum HOM05D000104 ORTHO05D006241 7.2e-06 54.3 65 46.2
Nitab4.5_0000136g0450 Nicotiana tabacum HOM05D000104 ORTHO05D006241 7.2e-06 54.3 68 44.1
Aqoxy2G01756 Aquilegia oxysepala HOM05D004245 ORTHO05D004783 9.5e-06 53.9 76 43.4
Gohir.D12G065200 Gossypium hirsutum HOM05D000104 ORTHO05D006241 9.5e-06 53.9 56 58.9
Lj2A452T23 Lonicera japonica HOM05D000104 ORTHO05D006241 9.5e-06 53.9 47 59.6
Potri.019G129900 Populus trichocarpa HOM05D000104 ORTHO05D006241 9.5e-06 53.9 78 44.9
vmacro01889 Vaccinium macrocarpon HOM05D000104 ORTHO05D006241 9.5e-06 53.9 109 38.5


User provided reference genes

Program Settings