Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 2.5e-139 499.6 448 100.0
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.5e-86 324.3 406 74.9
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 1.9e-86 323.9 406 70.7
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 1.0e-84 318.2 415 81.2
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 5.2e-84 315.8 411 70.1
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 8.2e-82 308.5 424 82.1
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 1.8e-81 307.4 410 71.0
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 7.0e-81 305.4 408 79.4
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 2.6e-80 303.5 417 62.6
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 3.8e-79 299.7 409 72.1
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 1.1e-78 298.1 366 67.2
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 4.2e-78 296.2 319 68.7
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 5.5e-78 295.8 416 67.5
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 9.4e-78 295.0 319 61.1
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 2.7e-77 293.5 408 81.9
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 2.7e-77 293.5 317 69.7
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 3.6e-77 293.1 415 70.6
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 3.6e-77 293.1 415 64.8
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 1.8e-76 290.8 409 68.9
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 4.0e-76 289.7 406 69.0
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 6.8e-76 288.9 319 68.0
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 1.5e-75 287.7 415 72.5
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 1.5e-75 287.7 319 67.4
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 2.0e-75 287.3 406 80.3
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 2.0e-75 287.3 400 72.0
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 4.4e-75 286.2 409 81.9
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 4.4e-75 286.2 410 75.6
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 7.5e-75 285.4 413 75.8
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 2.2e-74 283.9 408 77.9
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 4.8e-74 282.7 409 81.4
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 4.8e-74 282.7 403 61.8
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 1.8e-73 280.8 431 67.5
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 3.1e-73 280.0 419 71.8
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 4.1e-73 279.6 319 59.9
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 9.1e-73 278.5 406 75.1
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 4.5e-72 276.2 410 69.5
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 4.5e-72 276.2 413 65.9
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 5.9e-72 275.8 414 76.6
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 7.7e-72 275.4 418 73.2
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 1.0e-71 275.0 366 68.0
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 2.5e-70 270.4 416 79.3
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 2.7e-69 266.9 412 77.2
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 2.7e-69 266.9 465 54.8
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 4.7e-69 266.2 322 73.3
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 6.1e-69 265.8 390 76.9
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.4e-68 264.6 319 60.2
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 3.0e-68 263.5 319 59.6
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 2.0e-67 260.8 313 76.4
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 5.7e-67 259.2 417 64.0
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 7.5e-67 258.8 409 61.6
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 2.2e-66 257.3 364 59.6
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 6.3e-66 255.8 413 60.0
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 8.3e-66 255.4 409 61.6
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 1.8e-65 254.2 408 59.8
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 5.4e-65 252.7 364 76.1
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 7.0e-65 252.3 412 62.4
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 2.0e-64 250.8 411 63.3
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 3.5e-64 250.0 406 67.2
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 4.5e-64 249.6 409 55.7
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 1.1e-62 245.0 413 57.4
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 1.5e-62 244.6 420 69.8
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 1.5e-62 244.6 412 70.6
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 1.9e-62 244.2 389 76.1
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 7.2e-62 242.3 359 79.7
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.2e-61 241.5 404 61.4
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 3.6e-61 240.0 408 58.8
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 4.7e-61 239.6 415 62.9
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 2.3e-60 237.3 406 73.9
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 4.0e-60 236.5 409 59.2
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 4.4e-59 233.0 364 76.6
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 9.8e-59 231.9 410 59.8
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 1.3e-58 231.5 396 68.7
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 8.3e-58 228.8 415 57.6
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 7.0e-57 225.7 412 54.6
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 1.6e-56 224.6 320 66.2
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 4.5e-56 223.0 408 55.9
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 4.5e-56 223.0 280 62.9
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 1.3e-55 221.5 323 66.3
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 5.0e-55 219.5 260 57.7
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 6.6e-55 219.2 319 59.6
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 6.6e-55 219.2 384 56.8
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 2.5e-54 217.2 319 57.7
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 1.6e-53 214.5 407 65.8
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 1.4e-52 211.5 407 60.0
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 5.2e-52 209.5 257 71.6
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 2.6e-51 207.2 319 55.8
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 3.4e-51 206.8 414 49.5
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 2.2e-50 204.1 334 45.5
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 1.1e-49 201.8 388 55.2
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 1.9e-49 201.1 386 56.7
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 1.2e-48 198.4 417 59.7
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 1.7e-47 194.5 345 50.7
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 1.5e-46 191.4 387 54.8
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 1.5e-46 191.4 327 48.9
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 1.5e-46 191.4 280 56.4
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 2.5e-46 190.7 264 71.6
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 2.1e-45 187.6 222 60.8
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 3.4e-43 180.3 355 56.1
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 2.1e-40 171.0 322 42.5
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 2.1e-40 171.0 314 37.6
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 5.1e-39 166.4 364 51.6
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 1.6e-37 161.4 289 51.6
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 2.6e-35 154.1 358 58.9
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 1.5e-30 138.3 198 61.6
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 1.1e-25 122.1 97 63.9
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 2.8e-21 107.5 165 40.0
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.2e-19 102.1 67 74.6
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 3.8e-18 97.1 83 62.7
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 7.9e-16 89.4 105 82.9
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 7.9e-16 89.4 105 82.9
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 7.9e-16 89.4 105 82.9
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 1.0e-15 89.0 69 66.7
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 1.0e-15 89.0 102 72.5
Atru.chr2.2722 Acer truncatum HOM05D006220 ORTHO05D017154 1.1e-09 68.9 168 31.5
Sc13g0008670 Simmondsia chinensis HOM05D006220 ORTHO05D007590 1.9e-09 68.2 40 75.0
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 4.3e-06 57.0 236 51.7
Nn065s42227 Nelumbo nucifera HOM05D017120 ORTHO05D017154 7.4e-06 56.2 71 42.3


User provided reference genes

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