Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08152 Davidia involucrata HOM05D004252 ORTHO05D005101 8.6e-221 770.0 387 100.0
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 1.0e-173 613.6 338 91.1
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 5.3e-170 601.3 337 91.4
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 2.6e-169 599.0 376 80.9
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 2.2e-168 595.9 336 89.0
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 2.9e-168 595.5 335 90.7
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 1.4e-167 593.2 338 90.5
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 6.1e-166 587.8 338 89.3
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 6.1e-166 587.8 338 89.6
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 6.1e-166 587.8 376 79.8
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 2.3e-165 585.9 381 81.9
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 8.8e-165 583.9 337 89.3
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 2.0e-164 582.8 338 89.3
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 4.4e-164 581.6 338 88.8
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 7.4e-164 580.9 338 88.2
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 7.4e-164 580.9 338 88.2
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 1.4e-162 576.6 338 87.9
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 1.4e-162 576.6 337 87.2
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 1.4e-162 576.6 375 79.5
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 1.8e-162 576.2 336 88.7
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 4.1e-162 575.1 337 84.6
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 5.3e-162 574.7 378 80.7
Atru.chr2.822 Acer truncatum HOM05D004252 ORTHO05D005101 9.1e-162 573.9 338 87.3
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 9.1e-162 573.9 338 88.2
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 9.1e-162 573.9 337 84.3
Sopen01g040990 Solanum pennellii HOM05D004252 ORTHO05D005101 9.1e-162 573.9 337 84.3
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 2.0e-161 572.8 337 85.5
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 2.6e-161 572.4 338 87.6
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 3.4e-161 572.0 335 85.1
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 3.4e-161 572.0 374 78.9
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 3.4e-161 572.0 336 88.1
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 4.5e-161 571.6 340 87.4
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.2e-160 569.3 338 87.0
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 2.2e-160 569.3 338 87.0
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 3.8e-160 568.5 340 83.5
Ah.06g192370 Amaranthus hybridus HOM05D004252 ORTHO05D005101 8.5e-160 567.4 337 85.5
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 8.5e-160 567.4 338 87.6
Oeu002657.3 Olea europaea HOM05D004252 ORTHO05D005101 1.4e-159 566.6 375 79.5
Oeu027473.1 Olea europaea HOM05D004252 ORTHO05D005101 3.2e-159 565.5 335 84.2
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 4.2e-159 565.1 337 86.1
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 4.2e-159 565.1 337 85.2
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 4.2e-159 565.1 337 84.9
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 5.5e-159 564.7 331 87.3
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 7.2e-159 564.3 338 86.7
CAN.G134.96 Capsicum annuum HOM05D004252 ORTHO05D005101 7.2e-159 564.3 337 83.1
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 1.2e-158 563.5 331 87.0
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.6e-158 563.1 337 85.5
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 1.6e-158 563.1 363 81.5
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.6e-158 563.1 363 82.1
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 2.1e-158 562.8 340 84.1
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 8.0e-158 560.8 344 84.0
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 8.0e-158 560.8 336 83.3
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 1.0e-157 560.5 337 85.2
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 1.8e-157 559.7 337 84.9
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 3.0e-157 558.9 337 84.9
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 3.9e-157 558.5 339 85.5
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 6.7e-157 557.8 377 76.4
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 1.1e-156 557.0 335 86.3
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.5e-156 556.6 363 81.8
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 2.0e-156 556.2 373 79.6
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 3.3e-156 555.4 375 78.1
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 4.4e-156 555.1 335 86.0
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 1.3e-155 553.5 310 90.6
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 1.3e-155 553.5 336 85.7
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 1.3e-155 553.5 337 84.0
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 1.7e-155 553.1 337 83.4
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 2.8e-155 552.4 338 84.6
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 2.8e-155 552.4 337 84.0
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 8.2e-155 550.8 337 84.6
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 2.4e-154 549.3 337 81.3
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 3.1e-154 548.9 341 83.9
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 5.3e-154 548.1 371 79.0
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 1.6e-153 546.6 336 82.4
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 3.5e-153 545.4 332 84.9
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 4.5e-153 545.0 335 84.2
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 5.9e-153 544.7 337 81.6
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 5.9e-153 544.7 337 81.6
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 2.9e-152 542.3 337 81.6
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 6.5e-152 541.2 338 83.1
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 8.5e-152 540.8 373 75.3
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 5.5e-151 538.1 333 83.5
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 1.6e-150 536.6 338 84.0
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 1.4e-149 533.5 349 78.5
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 1.8e-149 533.1 337 81.9
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 8.8e-149 530.8 318 86.8
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 3.3e-148 528.9 337 79.8
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 3.3e-148 528.9 344 80.5
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 7.0e-146 521.2 342 80.7
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 2.7e-145 519.2 390 72.8
SGA_v2.0_scaffold172G38984 Striga asiatica HOM05D004252 ORTHO05D005101 3.5e-145 518.8 337 80.1
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 1.0e-144 517.3 379 73.6
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 1.3e-144 516.9 337 79.5
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 1.3e-144 516.9 337 79.5
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 3.8e-144 515.4 339 80.5
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 5.0e-144 515.0 328 81.1
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 5.0e-144 515.0 328 81.1
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 5.0e-144 515.0 339 80.2
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 8.5e-144 514.2 335 78.8
CARHR078990 Cardamine hirsuta HOM05D004252 ORTHO05D005101 1.9e-143 513.1 337 79.5
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 1.9e-143 513.1 340 78.5
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 8.8e-141 504.2 335 76.1
CDE02G1705 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 3.5e-137 492.3 335 75.2
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 2.9e-136 489.2 378 69.3
SEGI_19302 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 1.4e-133 480.3 351 72.9
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 1.3e-131 473.8 363 70.2
Os08g0333000 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 3.1e-130 469.2 373 68.9
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 3.5e-129 465.7 339 72.9
SHI18418 Sapria himalayana HOM05D004252 ORTHO05D005101 5.8e-116 421.8 330 64.2
Cpa.g.sc2756.1 Carica papaya HOM05D004252 ORTHO05D005101 1.4e-114 417.2 267 84.6
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 2.8e-102 376.3 315 67.3
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 7.6e-100 368.2 211 84.4
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 2.4e-98 363.2 249 77.9
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 1.2e-94 350.9 345 55.4
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 2.5e-87 326.6 341 52.8
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 1.5e-84 317.4 339 51.0
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.5e-79 300.8 331 48.3
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 3.3e-79 299.7 348 47.4
Aqoxy1G03371 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 1.0e-48 198.4 123 82.1
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 7.0e-37 159.1 114 73.7
HanXRQChr01g0016721 Helianthus annuus HOM05D004252 ORTHO05D005101 2.1e-09 67.8 66 59.1
HanXRQChr13g0410791 Helianthus annuus HOM05D004252 ORTHO05D005101 2.1e-09 67.8 66 59.1
HanXRQChr10g0278361 Helianthus annuus HOM05D004252 ORTHO05D005101 2.8e-09 67.4 71 59.2
PGR031G0210 Punica granatum HOM05D004252 ORTHO05D005101 2.3e-08 64.3 37 83.8


User provided reference genes

Program Settings