Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 3.9e-251 870.9 425 100.0
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 1.3e-164 583.6 546 60.8
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 5.0e-153 545.0 546 56.2
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 3.6e-151 538.9 541 55.5
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 7.4e-149 531.2 546 55.9
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 7.4e-149 531.2 550 55.6
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 2.2e-148 529.6 546 55.7
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 1.4e-147 526.9 544 55.1
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 6.9e-147 524.6 546 55.3
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 6.9e-147 524.6 549 54.6
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 1.5e-146 523.5 559 53.7
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 1.5e-146 523.5 553 54.6
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 1.5e-146 523.5 557 54.6
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 7.7e-146 521.2 551 55.0
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 6.5e-145 518.1 555 54.6
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 8.5e-145 517.7 549 53.9
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 1.4e-144 516.9 541 53.4
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.5e-144 516.2 547 54.3
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.5e-144 516.2 547 54.5
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 3.2e-144 515.8 561 52.9
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 4.2e-144 515.4 553 53.5
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 4.2e-144 515.4 531 55.2
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 5.5e-144 515.0 553 53.2
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 7.2e-144 514.6 547 54.1
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.2e-143 513.8 548 53.6
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 1.2e-143 513.8 550 54.2
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 1.6e-143 513.5 537 54.2
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 2.1e-143 513.1 546 52.6
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 3.6e-143 512.3 540 55.0
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 4.7e-143 511.9 559 53.5
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 1.0e-142 510.8 550 53.3
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 2.3e-142 509.6 547 52.7
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 2.3e-142 509.6 550 54.4
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 3.0e-142 509.2 539 54.0
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 3.9e-142 508.8 560 53.4
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 5.1e-142 508.4 556 52.7
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 5.1e-142 508.4 547 53.0
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 6.7e-142 508.1 539 54.2
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 6.7e-142 508.1 554 52.5
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 6.7e-142 508.1 555 52.8
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 6.7e-142 508.1 551 53.4
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 6.7e-142 508.1 549 53.6
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 6.7e-142 508.1 566 51.4
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 8.8e-142 507.7 534 54.3
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 8.8e-142 507.7 537 54.0
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.1e-141 507.3 555 52.8
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 1.1e-141 507.3 546 52.2
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 1.5e-141 506.9 556 52.5
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.5e-141 506.9 550 52.4
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 2.0e-141 506.5 561 52.6
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 2.6e-141 506.1 539 53.6
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 5.7e-141 505.0 544 54.2
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 7.4e-141 504.6 552 53.4
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 9.7e-141 504.2 539 53.4
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 9.7e-141 504.2 552 53.3
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 1.3e-140 503.8 534 52.4
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 1.7e-140 503.4 553 52.3
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 1.7e-140 503.4 533 53.3
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 2.2e-140 503.1 547 52.1
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 2.8e-140 502.7 556 52.3
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 3.7e-140 502.3 552 53.4
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 3.7e-140 502.3 539 53.2
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 6.3e-140 501.5 544 52.8
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 1.1e-139 500.7 543 53.4
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.1e-139 500.7 541 52.3
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 1.4e-139 500.4 551 52.3
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 1.4e-139 500.4 546 52.4
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 4.1e-139 498.8 538 52.0
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 5.3e-139 498.4 536 54.1
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 9.1e-139 497.7 548 51.5
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 1.2e-138 497.3 559 52.2
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 2.0e-138 496.5 524 53.4
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 2.6e-138 496.1 546 52.9
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 4.5e-138 495.4 596 49.0
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 5.9e-138 495.0 516 54.3
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 1.0e-137 494.2 547 52.7
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 2.2e-137 493.0 546 52.2
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 3.8e-137 492.3 547 51.4
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 5.0e-137 491.9 539 52.1
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 1.9e-136 490.0 533 52.7
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 3.2e-136 489.2 533 52.7
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 4.2e-136 488.8 554 51.6
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 7.2e-136 488.0 533 52.5
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 7.2e-136 488.0 533 52.5
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 1.2e-135 487.3 527 52.0
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 1.2e-135 487.3 535 52.3
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 2.7e-135 486.1 520 54.6
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 3.6e-135 485.7 546 50.7
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 1.0e-134 484.2 537 51.8
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 1.4e-134 483.8 546 50.7
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 1.8e-134 483.4 509 53.2
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 1.8e-134 483.4 535 51.8
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 6.7e-134 481.5 521 52.2
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 2.0e-133 479.9 533 51.4
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 3.3e-133 479.2 544 50.2
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 5.7e-133 478.4 536 51.5
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 7.4e-133 478.0 539 51.6
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 9.7e-133 477.6 550 50.4
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 2.2e-132 476.5 491 56.2
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 8.2e-132 474.6 658 46.4
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 1.4e-131 473.8 531 53.1
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 9.1e-131 471.1 499 52.9
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 8.5e-129 464.5 509 50.7
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 1.9e-128 463.4 409 60.1
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 9.4e-128 461.1 540 50.4
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 2.7e-127 459.5 537 49.0
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 4.7e-127 458.8 540 50.0
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 8.0e-127 458.0 544 50.2
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 1.8e-126 456.8 514 50.4
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 2.3e-126 456.4 541 49.0
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 3.3e-125 452.6 513 50.3
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 1.7e-124 450.3 499 51.7
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 5.3e-123 445.3 523 49.5
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.6e-119 433.7 394 60.7
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 1.0e-118 431.0 501 48.9
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.6e-117 426.4 561 47.2
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 1.3e-116 424.1 519 46.6
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 5.5e-112 408.7 326 65.6
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 1.1e-104 384.4 288 68.4
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 6.1e-103 378.6 518 42.7
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 4.9e-100 369.0 416 52.2
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 1.9e-99 367.1 543 41.1
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 7.8e-98 361.7 521 43.0
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.2e-95 354.4 417 51.3
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 2.8e-95 353.2 416 49.8
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 5.6e-88 328.9 472 43.2
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 1.4e-83 314.3 516 40.3
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 3.3e-80 303.1 430 46.3
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 3.3e-72 276.6 496 35.5
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 6.9e-70 268.9 428 40.2
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 1.3e-68 264.6 305 51.1
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 1.2e-61 241.5 319 45.1
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 9.9e-61 238.4 318 46.5
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 2.4e-54 217.2 289 42.2
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.2e-51 206.5 119 83.2
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 6.2e-47 192.6 113 82.3
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 6.9e-46 189.1 300 37.3
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 3.3e-40 170.2 99 81.8
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 8.2e-39 165.6 264 38.3
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 1.5e-37 161.4 159 56.0
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 2.6e-37 160.6 194 50.5
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 2.9e-36 157.1 311 34.1
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 1.4e-33 148.3 317 36.6
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.8e-33 147.9 123 63.4
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.0e-32 144.4 112 67.0
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 2.8e-31 140.6 94 72.3
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 5.5e-27 126.3 246 37.0
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 7.9e-26 122.5 248 35.5
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 3.9e-25 120.2 79 77.2
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 1.3e-23 115.2 253 32.0
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 4.8e-23 113.2 81 67.9
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 6.3e-23 112.8 56 89.3
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 7.0e-22 109.4 57 86.0
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 4.2e-19 100.1 242 31.4
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 2.3e-17 94.4 174 38.5
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 2.2e-15 87.8 60 70.0
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.1e-14 85.5 105 46.7
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 1.3e-12 78.6 64 62.5
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 8.5e-12 75.9 68 58.8
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 7.2e-11 72.8 61 62.3
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 1.2e-10 72.0 127 38.6
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 1.6e-10 71.6 49 71.4
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 2.7e-10 70.9 155 34.8
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 3.4e-08 63.9 38 68.4
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 4.4e-08 63.5 64 50.0
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 9.7e-08 62.4 39 74.4
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 1.4e-06 58.5 31 90.3


User provided reference genes

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