Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 1.2e-231 806.2 414 100.0
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 2.2e-161 572.8 385 74.5
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.8e-161 572.4 336 83.3
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 3.5e-159 565.5 339 81.1
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 4.4e-154 548.5 331 77.3
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 2.7e-151 539.3 351 76.1
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 3.5e-151 538.9 330 74.8
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 7.7e-151 537.7 336 75.3
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 1.3e-150 537.0 336 74.1
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 1.3e-150 537.0 382 71.5
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 2.2e-150 536.2 341 73.6
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 6.5e-150 534.6 340 75.9
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 8.5e-150 534.3 328 79.0
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 1.9e-149 533.1 345 73.0
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 7.2e-149 531.2 333 76.9
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 2.7e-148 529.3 346 74.3
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 2.3e-147 526.2 346 72.8
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 3.0e-147 525.8 346 73.1
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 3.0e-147 525.8 330 76.4
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 1.5e-146 523.5 335 75.2
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 7.5e-146 521.2 337 73.6
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 1.3e-145 520.4 382 68.1
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 1.7e-145 520.0 327 74.6
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 1.7e-145 520.0 379 67.8
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 2.8e-145 519.2 335 73.1
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 2.8e-145 519.2 346 72.8
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 3.7e-145 518.8 330 76.4
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 3.7e-145 518.8 344 73.0
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 8.3e-145 517.7 334 72.8
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 1.1e-144 517.3 350 69.7
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 1.4e-144 516.9 339 74.0
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 2.4e-144 516.2 343 71.1
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 5.4e-144 515.0 337 70.9
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 3.5e-143 512.3 345 68.4
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 7.7e-143 511.1 331 74.0
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 2.2e-142 509.6 337 70.9
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 6.5e-142 508.1 332 72.3
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 8.5e-142 507.7 328 75.3
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 2.5e-141 506.1 338 68.6
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 3.2e-141 505.8 353 69.4
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 5.5e-141 505.0 335 72.8
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 7.2e-141 504.6 335 72.5
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 7.2e-141 504.6 337 71.2
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 9.4e-141 504.2 337 72.4
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 2.7e-140 502.7 329 70.5
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 2.7e-140 502.7 320 73.8
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 2.7e-140 502.7 342 69.9
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 3.6e-140 502.3 347 69.5
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 4.7e-140 501.9 416 61.8
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 8.0e-140 501.1 337 69.4
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 1.8e-139 500.0 337 72.1
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.2e-138 497.3 332 69.9
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.5e-138 496.9 320 72.8
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 2.0e-138 496.5 318 74.5
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 4.4e-138 495.4 322 73.6
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 5.7e-138 495.0 330 70.3
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 7.5e-138 494.6 331 69.2
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 9.8e-138 494.2 328 69.5
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 1.4e-136 490.3 346 66.8
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 3.1e-136 489.2 410 59.8
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 4.1e-136 488.8 328 68.9
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 5.4e-136 488.4 339 68.1
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 7.0e-136 488.0 338 67.8
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 7.0e-136 488.0 329 67.8
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 9.2e-136 487.6 316 73.7
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 1.2e-135 487.3 338 67.8
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 2.5e-133 479.6 324 71.6
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 4.3e-133 478.8 316 72.2
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 5.6e-133 478.4 357 66.1
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 7.3e-133 478.0 335 69.9
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 9.5e-133 477.6 328 69.5
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 6.1e-132 474.9 356 64.9
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 8.0e-132 474.6 391 60.1
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 1.0e-131 474.2 339 68.7
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 4.0e-131 472.2 359 64.9
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 3.4e-130 469.2 395 61.3
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 5.7e-130 468.4 331 65.6
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 1.7e-129 466.8 293 76.8
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 2.2e-129 466.5 335 69.6
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 3.7e-129 465.7 335 69.3
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 5.4e-128 461.8 319 68.3
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 1.2e-127 460.7 343 66.8
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 1.2e-127 460.7 320 68.4
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 5.0e-126 455.3 345 62.6
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 6.6e-126 454.9 331 65.9
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 8.6e-126 454.5 332 67.8
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 1.5e-125 453.8 331 66.8
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.2e-124 450.7 264 81.4
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 1.6e-124 450.3 337 63.5
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 5.2e-123 445.3 335 65.1
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 5.2e-123 445.3 351 62.1
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.2e-122 444.1 331 65.6
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 5.8e-122 441.8 331 65.3
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 8.3e-121 438.0 334 63.2
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 4.1e-120 435.6 618 43.9
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 5.4e-120 435.3 330 64.5
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 2.7e-119 433.0 286 70.6
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 1.3e-118 430.6 315 66.3
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 1.4e-115 420.6 323 64.4
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 1.4e-115 420.6 323 64.4
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 6.8e-115 418.3 291 66.3
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 2.0e-114 416.8 291 69.1
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.4e-114 416.0 323 64.1
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 6.4e-113 411.8 268 73.1
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 8.3e-113 411.4 345 60.6
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 1.9e-112 410.2 345 60.6
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 3.9e-110 402.5 276 67.0
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 1.4e-107 394.0 295 65.1
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 5.2e-107 392.1 326 61.3
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 5.2e-107 392.1 238 71.8
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 5.2e-107 392.1 342 56.7
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 2.0e-106 390.2 335 56.1
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 4.4e-106 389.0 364 56.6
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 6.0e-103 378.6 373 54.4
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 1.1e-101 374.4 259 69.9
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 9.6e-101 371.3 321 56.4
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 6.0e-95 352.1 333 52.0
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 2.4e-91 340.1 299 54.8
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 3.1e-91 339.7 254 61.4
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 1.7e-89 334.0 197 78.7
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 2.2e-89 333.6 204 75.0
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 6.0e-87 325.5 337 46.6
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 6.9e-83 312.0 343 50.1
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.2e-81 307.0 208 73.6
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.6e-79 300.8 194 72.2
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 4.6e-79 299.3 176 77.3
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 4.5e-74 282.7 307 51.5
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 2.3e-70 270.4 245 54.7
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 2.1e-68 263.8 288 43.8
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 7.7e-58 228.8 162 67.3
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 2.7e-55 220.3 215 57.2
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 2.7e-55 220.3 261 45.2
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 3.9e-54 216.5 256 42.6
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.1e-53 214.9 143 70.6
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.7e-52 211.1 160 62.5
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 1.7e-49 201.1 286 37.4
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 3.0e-46 190.3 207 48.8
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 3.9e-46 189.9 209 48.8
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.6e-42 177.9 129 66.7
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 4.0e-38 163.3 301 35.9
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 6.7e-38 162.5 165 50.9
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 1.7e-33 147.9 79 84.8
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 1.4e-30 138.3 120 56.7
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 7.5e-29 132.5 89 74.2
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 7.5e-29 132.5 89 74.2
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 8.0e-23 112.5 124 48.4
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 1.8e-22 111.3 181 38.7
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 5.2e-22 109.8 272 30.1
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 5.0e-17 93.2 57 78.9
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 7.3e-16 89.4 74 56.8
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 1.0e-14 85.5 48 79.2
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 3.0e-14 84.0 113 46.9
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.3e-09 67.8 46 63.0
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 5.0e-09 66.6 67 52.2


User provided reference genes

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