Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07890 Davidia involucrata HOM05D002230 ORTHO05D002441 2.7e-95 352.1 186 100.0
Dinv36883 Davidia involucrata HOM05D002230 ORTHO05D002441 7.1e-88 327.4 168 97.6
Dinv44229 Davidia involucrata HOM05D002230 ORTHO05D002441 3.3e-85 318.5 168 94.0
Actinidia32938 Actinidia chinensis HOM05D002230 ORTHO05D002441 1.2e-82 310.1 165 91.5
Prupe.1G548200 Prunus persica HOM05D002230 ORTHO05D002441 4.9e-81 304.7 166 91.0
TAR627G1002 Trochodendron aralioides HOM05D002230 ORTHO05D002441 1.1e-80 303.5 166 89.8
Hma1.2p1_0007F.1_g004970 Hydrangea macrophylla HOM05D002230 ORTHO05D002441 1.4e-80 303.1 166 89.2
Prupe.8G069100 Prunus persica HOM05D002230 ORTHO05D002441 1.9e-80 302.8 164 91.5
Cfa015221 Carpinus fangiana HOM05D002230 ORTHO05D002441 4.2e-80 301.6 179 84.9
Haze_01398 Corylus avellana HOM05D002230 ORTHO05D002441 4.2e-80 301.6 179 84.9
CSS0042856 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 3.5e-79 298.5 166 88.0
DCAR_027245 Daucus carota HOM05D002230 ORTHO05D002441 4.6e-79 298.1 176 86.9
Duzib114G0665 Durio zibethinus HOM05D002230 ORTHO05D002441 4.6e-79 298.1 178 82.6
Eucgr.A00036 Eucalyptus grandis HOM05D002230 ORTHO05D002441 4.6e-79 298.1 166 89.2
Atru.chr4.1347 Acer truncatum HOM05D002230 ORTHO05D002441 7.9e-79 297.4 166 87.3
Nn3g21087 Nelumbo nucifera HOM05D002230 ORTHO05D002441 7.9e-79 297.4 166 88.6
TWI38G2091 Tripterygium wilfordii HOM05D002230 ORTHO05D002441 7.9e-79 297.4 178 83.7
MD00G1071300 Malus domestica HOM05D002230 ORTHO05D002441 1.3e-78 296.6 166 87.3
Ciclev10018567m.g Citrus clementina HOM05D002230 ORTHO05D002441 2.3e-78 295.8 178 82.0
Thecc.10G116300 Theobroma cacao HOM05D002230 ORTHO05D002441 2.3e-78 295.8 178 82.6
GSVIVG01020936001 Vitis vinifera HOM05D002230 ORTHO05D002441 5.1e-78 294.7 166 87.3
Cc03_g10880 Coffea canephora HOM05D002230 ORTHO05D002441 6.7e-78 294.3 165 89.1
Gohir.A10G197400 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.1e-77 293.5 178 82.6
MD03G1154000 Malus domestica HOM05D002230 ORTHO05D002441 1.9e-77 292.7 166 86.7
SGA_v2.0_scaffold172G39053 Striga asiatica HOM05D002230 ORTHO05D002441 4.3e-77 291.6 178 82.0
Gorai.011G229500 Gossypium raimondii HOM05D002230 ORTHO05D002441 7.4e-77 290.8 178 83.7
Gohir.D10G204500 Gossypium hirsutum HOM05D002230 ORTHO05D002441 9.6e-77 290.4 178 83.1
vmacro16180 Vaccinium macrocarpon HOM05D002230 ORTHO05D002441 9.6e-77 290.4 166 84.9
Gohir.A03G041200 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.3e-76 290.0 166 86.1
Gorai.003G133300 Gossypium raimondii HOM05D002230 ORTHO05D002441 1.3e-76 290.0 178 83.1
CiPaw.01G173300 Carya illinoinensis HOM05D002230 ORTHO05D002441 1.6e-76 289.7 176 83.5
Lj1A1071T61 Lonicera japonica HOM05D002230 ORTHO05D002441 2.1e-76 289.3 166 86.1
CANSAT54G2648 Cannabis sativa HOM05D002230 ORTHO05D002441 2.8e-76 288.9 164 85.4
MELO3C013185.2 Cucumis melo HOM05D002230 ORTHO05D002441 2.8e-76 288.9 177 81.9
CsaV3_7G021630 Cucumis sativus L. HOM05D002230 ORTHO05D002441 6.2e-76 287.7 177 81.4
Ciclev10027707m.g Citrus clementina HOM05D002230 ORTHO05D002441 2.4e-75 285.8 178 80.3
Nitab4.5_0005729g0040 Nicotiana tabacum HOM05D002230 ORTHO05D002441 3.1e-75 285.4 166 85.5
Peaxi162Scf00282g00128 Petunia axillaris HOM05D002230 ORTHO05D002441 3.1e-75 285.4 166 84.9
Sed0001302 Sechium edule HOM05D002230 ORTHO05D002441 3.1e-75 285.4 167 82.6
Nitab4.5_0009733g0020 Nicotiana tabacum HOM05D002230 ORTHO05D002441 4.0e-75 285.0 164 86.0
Phvul.011G051900 Phaseolus vulgaris HOM05D002230 ORTHO05D002441 6.9e-75 284.3 182 83.5
Solyc01g097640.3 Solanum lycopersicum HOM05D002230 ORTHO05D002441 9.0e-75 283.9 166 84.9
VMungo1127G0405 Vigna mungo HOM05D002230 ORTHO05D002441 9.0e-75 283.9 166 86.7
Sopen00g003550 Solanum pennellii HOM05D002230 ORTHO05D002441 1.2e-74 283.5 175 81.1
Sopen01g041250 Solanum pennellii HOM05D002230 ORTHO05D002441 1.2e-74 283.5 175 81.1
Manes.09G003400 Manihot esculenta HOM05D002230 ORTHO05D002441 1.5e-74 283.1 178 79.8
Oeu023211.3 Olea europaea HOM05D002230 ORTHO05D002441 1.5e-74 283.1 165 84.8
Lalb_Chr19g0138431 Lupinus albus HOM05D002230 ORTHO05D002441 2.0e-74 282.7 170 83.5
PGSC0003DMG403019442 Solanum tuberosum HOM05D002230 ORTHO05D002441 2.0e-74 282.7 166 84.3
CSS0011706 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 2.6e-74 282.3 156 87.8
QL03p066506 Quercus lobata HOM05D002230 ORTHO05D002441 4.5e-74 281.6 166 84.9
Sed0010811 Sechium edule HOM05D002230 ORTHO05D002441 1.7e-73 279.6 177 77.4
Glyma.11G125100 Glycine max HOM05D002230 ORTHO05D002441 2.2e-73 279.3 178 82.0
Glyma.12G049700 Glycine max HOM05D002230 ORTHO05D002441 4.9e-73 278.1 167 85.0
Ca_20807_v3 Cicer arietinum L. HOM05D002230 ORTHO05D002441 8.4e-73 277.3 183 78.7
Migut.A00192 Erythranthe guttata HOM05D002230 ORTHO05D002441 8.4e-73 277.3 178 79.8
Cpa.g.sc9.331 Carica papaya HOM05D002230 ORTHO05D002441 1.1e-72 276.9 163 85.3
Sc13g0000880 Simmondsia chinensis HOM05D002230 ORTHO05D002441 1.1e-72 276.9 166 82.5
Ciclev10027721m.g Citrus clementina HOM05D002230 ORTHO05D002441 1.9e-72 276.2 166 80.7
ClCG09G010650 Citrullus lanatus HOM05D002230 ORTHO05D002441 2.5e-72 275.8 207 72.0
CAN.G134.124 Capsicum annuum HOM05D002230 ORTHO05D002441 3.2e-72 275.4 156 86.5
Medtr4g068150 Medicago truncatula HOM05D002230 ORTHO05D002441 4.2e-72 275.0 182 78.6
Lj3g0013974 Lotus japonicus HOM05D002230 ORTHO05D002441 1.6e-71 273.1 180 78.3
Lalb_Chr01g0003061 Lupinus albus HOM05D002230 ORTHO05D002441 2.1e-71 272.7 166 82.5
RcHm_v2.0_Chr4g0406311 Rosa chinensis HOM05D002230 ORTHO05D002441 4.6e-71 271.6 163 79.8
RcHm_v2.0_Chr5g0051051 Rosa chinensis HOM05D002230 ORTHO05D002441 4.6e-71 271.6 164 79.9
Lj1g0018031 Lotus japonicus HOM05D002230 ORTHO05D002441 1.8e-70 269.6 168 81.0
FvH4_4g10660 Fragaria vesca HOM05D002230 ORTHO05D002441 6.7e-70 267.7 166 78.9
FAN12G3082 Fragaria x ananassa HOM05D002230 ORTHO05D002441 6.7e-70 267.7 166 78.9
FAN12G3273 Fragaria x ananassa HOM05D002230 ORTHO05D002441 6.7e-70 267.7 166 78.9
FAN17G0610 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.5e-69 266.5 169 78.1
Psat7g208680 Pisum sativum HOM05D002230 ORTHO05D002441 1.5e-69 266.5 182 75.8
FAN07G1373 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.9e-69 266.2 166 77.7
Potri.017G017700 Populus trichocarpa HOM05D002230 ORTHO05D002441 1.9e-69 266.2 166 80.7
TPR.G34218 Trifolium pratense HOM05D002230 ORTHO05D002441 3.3e-69 265.4 170 78.8
CDE06G0512 Ceratophyllum demersum HOM05D002230 ORTHO05D002441 1.6e-68 263.1 166 78.3
SalBow4G2246 Salvia bowleyana HOM05D002230 ORTHO05D002441 1.1e-67 260.4 164 78.7
HPP92_015122 Vanilla planifolia HOM05D002230 ORTHO05D002441 1.5e-66 256.5 178 71.3
Aqoxy1G01987 Aquilegia oxysepala HOM05D002230 ORTHO05D002441 2.6e-66 255.8 166 74.1
SHI00660 Sapria himalayana HOM05D002230 ORTHO05D002441 3.4e-66 255.4 177 75.1
arahy.Tifrunner.gnm1.ann1.XT66D5 Arachis hypogaea HOM05D002230 ORTHO05D002441 1.4e-64 250.0 178 70.8
MBI04_g09487_MAGBIO Magnolia biondii HOM05D002230 ORTHO05D002441 7.2e-64 247.7 166 76.5
arahy.Tifrunner.gnm1.ann1.W5M1I0 Arachis hypogaea HOM05D002230 ORTHO05D002441 1.2e-63 246.9 178 69.7
ATR0317G080 Amborella trichopoda HOM05D002230 ORTHO05D002441 4.6e-63 245.0 169 73.4
Hund16448 Selenicereus undatus HOM05D002230 ORTHO05D002441 7.9e-63 244.2 158 75.9
BolC5t29262H Brassica oleracea HOM05D002230 ORTHO05D002441 1.4e-62 243.4 184 70.1
PSO170G1574 Papaver somniferum HOM05D002230 ORTHO05D002441 1.4e-62 243.4 178 69.7
unitig_748.g7990 Utricularia gibba HOM05D002230 ORTHO05D002441 1.8e-62 243.0 199 64.3
A10p05300 Brassica napus HOM05D002230 ORTHO05D002441 3.0e-62 242.3 184 69.6
BraA10t42795Z Brassica rapa HOM05D002230 ORTHO05D002441 3.0e-62 242.3 184 69.6
C05p04900 Brassica napus HOM05D002230 ORTHO05D002441 3.9e-62 241.9 184 69.6
PSO782G1699 Papaver somniferum HOM05D002230 ORTHO05D002441 3.9e-62 241.9 178 69.1
Aa31LG1G7760 Aethionema arabicum HOM05D002230 ORTHO05D002441 6.7e-62 241.1 171 73.1
Thhalv10006612m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 6.7e-62 241.1 172 72.1
BcaC05g24645 Brassica carinata HOM05D002230 ORTHO05D002441 8.8e-62 240.7 163 74.8
THA.LOC104815521 Tarenaya hassleriana HOM05D002230 ORTHO05D002441 1.5e-61 240.0 150 78.0
Thhalv10027216m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 2.0e-61 239.6 160 73.8
SEGI_31495 Sequoiadendron giganteum HOM05D002230 ORTHO05D002441 7.4e-61 237.7 181 68.0
Sp1g05450 Schrenkiella parvula HOM05D002230 ORTHO05D002441 2.8e-60 235.7 172 70.9
Ah.04g150630 Amaranthus hybridus HOM05D002230 ORTHO05D002441 3.7e-60 235.3 156 75.0
EL10Ac3g07289 Beta vulgaris HOM05D002230 ORTHO05D002441 3.7e-60 235.3 178 68.5
Lsat_1_v5_gn_6_31421 Lactuca sativa HOM05D002230 ORTHO05D002441 3.1e-59 232.3 165 70.9
ECA236G3424 Erigeron canadensis HOM05D002230 ORTHO05D002441 6.9e-59 231.1 158 73.4
HanXRQChr14g0454041 Helianthus annuus HOM05D002230 ORTHO05D002441 1.2e-58 230.3 157 72.0
A09p66820 Brassica napus HOM05D002230 ORTHO05D002441 2.6e-58 229.2 184 66.8
AL1G16730 Arabidopsis lyrata HOM05D002230 ORTHO05D002441 7.7e-58 227.6 171 67.8
ECA233G0320 Erigeron canadensis HOM05D002230 ORTHO05D002441 2.2e-57 226.1 154 72.7
C08p51050 Brassica napus HOM05D002230 ORTHO05D002441 2.9e-57 225.7 172 69.2
BolC8t52632H Brassica oleracea HOM05D002230 ORTHO05D002441 8.5e-57 224.2 172 68.6
Mapoly0040s0120 Marchantia polymorpha HOM05D002230 ORTHO05D002441 8.5e-57 224.2 181 67.4
AT1G06720 Arabidopsis thaliana HOM05D002230 ORTHO05D002441 5.5e-56 221.5 167 67.7
BraA09t42020Z Brassica rapa HOM05D002230 ORTHO05D002441 7.2e-56 221.1 163 72.4
Carub.0001s0605 Capsella rubella HOM05D002230 ORTHO05D002441 3.6e-55 218.8 164 67.1
Sp7g16520 Schrenkiella parvula HOM05D002230 ORTHO05D002441 3.6e-55 218.8 151 72.2
AUR62021045 Chenopodium quinoa HOM05D002230 ORTHO05D002441 7.4e-53 211.1 156 67.3
Pp3c13_14960 Physcomitrium patens HOM05D002230 ORTHO05D002441 7.4e-53 211.1 149 69.8
Zm00001eb015920 Zea mays HOM05D002230 ORTHO05D002441 3.7e-52 208.8 163 63.8
AagrBONN_evm.TU.Sc2ySwM_369.529 Anthoceros agrestis HOM05D002230 ORTHO05D002441 6.3e-52 208.0 165 63.6
SHI22050 Sapria himalayana HOM05D002230 ORTHO05D002441 1.1e-51 207.2 138 73.9
AUR62018398 Chenopodium quinoa HOM05D002230 ORTHO05D002441 2.4e-51 206.1 179 60.9
SMO358G0014 Selaginella moellendorffii HOM05D002230 ORTHO05D002441 4.1e-51 205.3 166 63.9
Os03g0333100 Oryza sativa ssp. japonica HOM05D002230 ORTHO05D002441 5.3e-51 204.9 164 60.4
CARHR006400 Cardamine hirsuta HOM05D002230 ORTHO05D002441 7.0e-51 204.5 166 61.4
BcaC07g42052 Brassica carinata HOM05D002230 ORTHO05D002441 3.1e-43 179.1 173 57.2
Gohir.D03G126950 Gossypium hirsutum HOM05D002230 ORTHO05D002441 5.0e-41 171.8 114 81.6
FAN22G2096 Fragaria x ananassa HOM05D002230 ORTHO05D002441 4.0e-38 162.2 88 85.2
Sed0025157 Sechium edule HOM05D002230 ORTHO05D002441 1.5e-37 160.2 166 57.2
FAN12G0585 Fragaria x ananassa HOM05D002230 ORTHO05D002441 4.4e-37 158.7 166 51.8
MCO01G316 Micromonas commoda HOM05D002230 ORTHO05D002441 4.8e-36 155.2 153 52.3
PRCOL_00006812 Prasinoderma coloniale HOM05D002230 ORTHO05D002441 8.5e-33 144.4 164 49.4
RcHm_v2.0_Chr2g0114561 Rosa chinensis HOM05D002230 ORTHO05D002441 5.2e-30 135.2 92 76.1
Ciclev10024184m.g Citrus clementina HOM05D002230 ORTHO05D002441 1.8e-27 126.7 74 78.4
Rhsim08G0143400 Rhododendron simsii HOM05D002230 ORTHO05D010968 5.0e-25 118.6 75 81.3
Cre10.g445600 Chlamydomonas reinhardtii HOM05D002230 ORTHO05D002441 1.2e-23 114.0 271 31.4
Actinidia14351 Actinidia chinensis HOM05D002230 ORTHO05D002441 6.8e-22 108.2 121 52.1
Haze_26692 Corylus avellana HOM05D002230 ORTHO05D002441 6.8e-22 108.2 163 41.7
GSVIVG01021891001 Vitis vinifera HOM05D002230 ORTHO05D002441 1.3e-20 104.0 61 77.0
CDE04G3562 Ceratophyllum demersum HOM05D002230 ORTHO05D002441 1.1e-19 100.9 70 78.6
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 4.5e-18 95.5 69 73.9
SGA_v2.0_scaffold105G30315 Striga asiatica HOM05D002230 ORTHO05D051377 7.8e-18 94.7 56 85.7
PSO063G4741 Papaver somniferum HOM05D002230 ORTHO05D002441 6.8e-14 81.6 157 31.2
PSO332G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 5.8e-13 78.6 150 30.7
PSO421G0346 Papaver somniferum HOM05D002230 ORTHO05D002441 5.8e-13 78.6 150 30.7
Pp3c3_12633 Physcomitrium patens HOM05D002230 ORTHO05D002441 8.3e-12 74.7 95 45.3
PSO339G1305 Papaver somniferum HOM05D002230 ORTHO05D002441 1.1e-11 74.3 84 41.7
PSO384G3823 Papaver somniferum HOM05D002230 ORTHO05D002441 5.4e-11 72.0 148 37.8
PSO264G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 9.2e-11 71.2 147 28.6
PSO673G0034 Papaver somniferum HOM05D002230 ORTHO05D002441 9.2e-11 71.2 147 28.6
PSO384G2856 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-10 70.1 135 32.6
PSO673G0035 Papaver somniferum HOM05D002230 ORTHO05D002441 6.0e-10 68.6 154 31.2
PSO173G0025 Papaver somniferum HOM05D002230 ORTHO05D002441 5.0e-09 65.5 181 32.0
PSO455G0070 Papaver somniferum HOM05D002230 ORTHO05D002441 7.3e-08 61.6 81 44.4
PSO173G0158 Papaver somniferum HOM05D002230 ORTHO05D002441 9.5e-08 61.2 165 32.1
PSO081G0126 Papaver somniferum HOM05D002230 ORTHO05D002441 2.3e-06 56.6 43 48.8
PSO673G0018 Papaver somniferum HOM05D002230 ORTHO05D002441 4.0e-06 55.8 164 28.0
PSO421G0277 Papaver somniferum HOM05D002230 ORTHO05D002441 6.8e-06 55.1 109 33.9


User provided reference genes

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