Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07548 Davidia involucrata HOM05D005670 ORTHO05D007612 4.1e-56 221.1 106 100.0
Lj1A1206G64 Lonicera japonica HOM05D005670 ORTHO05D007612 4.9e-25 117.9 64 82.8
CSS0005949 Camellia sinensis var. sinensis HOM05D005670 ORTHO05D007612 1.4e-24 116.3 75 73.3
vmacro15902 Vaccinium macrocarpon HOM05D005670 ORTHO05D007612 1.6e-23 112.8 75 72.0
Rhsim02G0128200 Rhododendron simsii HOM05D005670 ORTHO05D007612 2.0e-23 112.5 75 69.3
ClCG03G005950 Citrullus lanatus HOM05D005670 ORTHO05D007612 7.8e-23 110.5 74 68.9
Lsat_1_v5_gn_7_18941 Lactuca sativa HOM05D005670 ORTHO05D007612 2.3e-22 109.0 65 73.8
DCAR_004080 Daucus carota HOM05D005670 ORTHO05D007612 5.0e-22 107.8 62 79.0
Glyma.15G073000 Glycine max HOM05D005670 ORTHO05D007612 5.0e-22 107.8 73 68.5
Cpa.g.sc27.55 Carica papaya HOM05D005670 ORTHO05D007612 8.6e-22 107.1 75 66.7
ECA236G2993 Erigeron canadensis HOM05D005670 ORTHO05D007612 1.1e-21 106.7 65 72.3
HanXRQChr04g0124101 Helianthus annuus HOM05D005670 ORTHO05D007612 1.1e-21 106.7 65 72.3
Glyma.13G240500 Glycine max HOM05D005670 ORTHO05D007612 1.5e-21 106.3 73 67.1
Sabra04G0025900 Salix brachista HOM05D005670 ORTHO05D007612 1.5e-21 106.3 75 64.0
CiPaw.09G058400 Carya illinoinensis HOM05D005670 ORTHO05D007612 1.9e-21 105.9 75 62.7
Solyc02g078400.3 Solanum lycopersicum HOM05D005670 ORTHO05D007612 2.5e-21 105.5 75 64.0
Atru.chr10.1904 Acer truncatum HOM05D005670 ORTHO05D007612 3.3e-21 105.1 91 56.0
MSTRG.7329 Avicennia marina HOM05D005670 ORTHO05D007612 4.3e-21 104.8 64 70.3
Medtr2g013060 Medicago truncatula HOM05D005670 ORTHO05D007612 4.3e-21 104.8 62 74.2
Nitab4.5_0002158g0080 Nicotiana tabacum HOM05D005670 ORTHO05D007612 4.3e-21 104.8 75 64.0
Sed0013715 Sechium edule HOM05D005670 ORTHO05D007612 4.3e-21 104.8 74 63.5
PGSC0003DMG400022386 Solanum tuberosum HOM05D005670 ORTHO05D007612 4.3e-21 104.8 73 65.8
Gohir.A10G024800 Gossypium hirsutum HOM05D005670 ORTHO05D007612 5.6e-21 104.4 85 58.8
Gorai.011G026800 Gossypium raimondii HOM05D005670 ORTHO05D007612 5.6e-21 104.4 85 58.8
Lalb_Chr15g0089871 Lupinus albus HOM05D005670 ORTHO05D007612 5.6e-21 104.4 62 74.2
Nitab4.5_0005954g0030 Nicotiana tabacum HOM05D005670 ORTHO05D007612 5.6e-21 104.4 75 64.0
Sopen02g023260 Solanum pennellii HOM05D005670 ORTHO05D007612 5.6e-21 104.4 75 62.7
Psat1g206560 Pisum sativum HOM05D005670 ORTHO05D007612 7.3e-21 104.0 62 75.8
Ca_00305_v3 Cicer arietinum L. HOM05D005670 ORTHO05D007612 9.5e-21 103.6 62 74.2
Gohir.D10G025500 Gossypium hirsutum HOM05D005670 ORTHO05D007612 1.6e-20 102.8 77 62.3
Peaxi162Scf00947g00005 Petunia axillaris HOM05D005670 ORTHO05D007612 1.6e-20 102.8 75 62.7
VMungo0540G1414 Vigna mungo HOM05D005670 ORTHO05D007612 1.6e-20 102.8 73 63.0
EL10Ac8g20366 Beta vulgaris HOM05D005670 ORTHO05D007612 2.1e-20 102.4 85 56.5
CsaV3_1G012190 Cucumis sativus L. HOM05D005670 ORTHO05D007612 2.1e-20 102.4 74 66.2
BcaC04g21352 Brassica carinata HOM05D005670 ORTHO05D007612 2.8e-20 102.1 64 68.8
C09p32840 Brassica napus HOM05D005670 ORTHO05D007612 2.8e-20 102.1 64 68.8
BolC9t56124H Brassica oleracea HOM05D005670 ORTHO05D007612 2.8e-20 102.1 64 68.8
AUR62014803 Chenopodium quinoa HOM05D005670 ORTHO05D007612 2.8e-20 102.1 85 56.5
Thhalv10028578m.g Eutrema salsugineum HOM05D005670 ORTHO05D007612 2.8e-20 102.1 64 68.8
TPR.G36745 Trifolium pratense HOM05D005670 ORTHO05D007612 2.8e-20 102.1 62 74.2
BcaB01g01850 Brassica carinata HOM05D005670 ORTHO05D007612 3.6e-20 101.7 64 67.2
Potri.004G041800 Populus trichocarpa HOM05D005670 ORTHO05D007612 3.6e-20 101.7 75 61.3
AL6G48490 Arabidopsis lyrata HOM05D005670 ORTHO05D007612 4.7e-20 101.3 64 67.2
AT4G04955 Arabidopsis thaliana HOM05D005670 ORTHO05D007612 4.7e-20 101.3 64 65.6
CAN.G1164.15 Capsicum annuum HOM05D005670 ORTHO05D007612 4.7e-20 101.3 75 60.0
Phvul.006G186700 Phaseolus vulgaris HOM05D005670 ORTHO05D007612 4.7e-20 101.3 73 61.6
TWI38G1891 Tripterygium wilfordii HOM05D005670 ORTHO05D007612 4.7e-20 101.3 64 68.8
Ciclev10014972m.g Citrus clementina HOM05D005670 ORTHO05D007612 6.2e-20 100.9 75 61.3
FvH4_3g09410 Fragaria vesca HOM05D005670 ORTHO05D007612 6.2e-20 100.9 75 61.3
TAR626G1957 Trochodendron aralioides HOM05D005670 ORTHO05D007612 6.2e-20 100.9 64 70.3
Ah.09g237260 Amaranthus hybridus HOM05D005670 ORTHO05D007612 8.1e-20 100.5 83 56.6
A09p25930 Brassica napus HOM05D005670 ORTHO05D007612 8.1e-20 100.5 64 67.2
BraA09t38162Z Brassica rapa HOM05D005670 ORTHO05D007612 8.1e-20 100.5 64 67.2
AUR62016994 Chenopodium quinoa HOM05D005670 ORTHO05D007612 8.1e-20 100.5 85 55.3
THA.LOC104806286 Tarenaya hassleriana HOM05D005670 ORTHO05D007612 1.1e-19 100.1 64 68.8
Carub.0006s3289 Capsella rubella HOM05D005670 ORTHO05D007612 1.4e-19 99.8 64 65.6
Duzib192G0381 Durio zibethinus HOM05D005670 ORTHO05D007612 1.4e-19 99.8 75 62.7
Glyma.15G072900 Glycine max HOM05D005670 ORTHO05D007612 1.4e-19 99.8 62 71.0
QL05p039856 Quercus lobata HOM05D005670 ORTHO05D007612 1.4e-19 99.8 75 60.0
SGA_v2.0_scaffold22G09723 Striga asiatica HOM05D005670 ORTHO05D007612 1.4e-19 99.8 63 73.0
Lj6g0007385 Lotus japonicus HOM05D005670 ORTHO05D007612 1.8e-19 99.4 62 71.0
THA.LOC104812854 Tarenaya hassleriana HOM05D005670 ORTHO05D007612 1.8e-19 99.4 64 67.2
FAN16G2869 Fragaria x ananassa HOM05D005670 ORTHO05D007612 2.3e-19 99.0 75 60.0
FAN21G0121 Fragaria x ananassa HOM05D005670 ORTHO05D007612 2.3e-19 99.0 75 60.0
Sp6g04000 Schrenkiella parvula HOM05D005670 ORTHO05D007612 2.3e-19 99.0 64 67.2
MD05G1314100 Malus domestica HOM05D005670 ORTHO05D007612 3.1e-19 98.6 64 65.6
Glyma.13G240600 Glycine max HOM05D005670 ORTHO05D007612 4.0e-19 98.2 62 69.4
Aa31LG9G9510 Aethionema arabicum HOM05D005670 ORTHO05D007612 5.2e-19 97.8 64 65.6
CARHR252570 Cardamine hirsuta HOM05D005670 ORTHO05D007612 5.2e-19 97.8 64 65.6
COL.COLO4_31493 Corchorus olitorius HOM05D005670 ORTHO05D008858 5.2e-19 97.8 75 61.3
Eucgr.E03116 Eucalyptus grandis HOM05D005670 ORTHO05D007612 5.2e-19 97.8 75 60.0
Nn1g06587 Nelumbo nucifera HOM05D005670 ORTHO05D007612 6.8e-19 97.4 64 68.8
Migut.M01152 Erythranthe guttata HOM05D005670 ORTHO05D007612 8.9e-19 97.1 64 67.2
Thecc.06G189700 Theobroma cacao HOM05D005670 ORTHO05D007612 8.9e-19 97.1 64 70.3
Eucgr.E03319 Eucalyptus grandis HOM05D005670 ORTHO05D007612 1.2e-18 96.7 75 58.7
MD00G1095000 Malus domestica HOM05D005670 ORTHO05D007612 1.2e-18 96.7 75 57.3
RcHm_v2.0_Chr5g0008181 Rosa chinensis HOM05D005670 ORTHO05D007612 1.5e-18 96.3 75 58.7
Hund23715 Selenicereus undatus HOM05D005670 ORTHO05D007612 2.0e-18 95.9 87 51.7
Manes.16G026300 Manihot esculenta HOM05D005670 ORTHO05D007612 2.6e-18 95.5 87 50.6
VMungo0540G1652 Vigna mungo HOM05D005670 ORTHO05D007612 2.6e-18 95.5 62 64.5
Phvul.006G186800 Phaseolus vulgaris HOM05D005670 ORTHO05D007612 4.4e-18 94.7 62 64.5
PSO675G5775 Papaver somniferum HOM05D005670 ORTHO05D007612 5.8e-18 94.4 75 58.7
Aqoxy1G02519 Aquilegia oxysepala HOM05D005670 ORTHO05D007612 7.5e-18 94.0 75 58.7
CANSAT35G0124 Cannabis sativa HOM05D005670 ORTHO05D007612 1.3e-17 93.2 64 62.5
Sc05g0007760 Simmondsia chinensis HOM05D005670 ORTHO05D007612 1.7e-17 92.8 64 64.1
Prupe.4G045000 Prunus persica HOM05D005670 ORTHO05D007612 2.2e-17 92.4 75 60.0
PGR042G2793 Punica granatum HOM05D005670 ORTHO05D007612 3.7e-17 91.7 62 66.1
MBI18_g16998_MAGBIO Magnolia biondii HOM05D005670 ORTHO05D007612 4.9e-17 91.3 64 60.9
unitig_22.g6763 Utricularia gibba HOM05D005670 ORTHO05D007612 1.4e-16 89.7 64 64.1
Sed0017986 Sechium edule HOM05D005670 ORTHO05D007612 9.2e-16 87.0 68 58.8
Zm00001eb374970 Zea mays HOM05D005670 ORTHO05D007612 1.6e-15 86.3 64 62.5
MELO3C002593.2 Cucumis melo HOM05D005670 ORTHO05D007612 6.0e-15 84.3 70 61.4
Zm00001eb433900 Zea mays HOM05D005670 ORTHO05D007612 7.8e-15 84.0 64 60.9
CDE09G0528 Ceratophyllum demersum HOM05D005670 ORTHO05D007612 1.0e-14 83.6 62 59.7
HPP92_014737 Vanilla planifolia HOM05D005670 ORTHO05D007612 6.6e-14 80.9 64 59.4
Haze_06486 Corylus avellana HOM05D005670 ORTHO05D007612 7.3e-13 77.4 68 51.5
ATR0680G385 Amborella trichopoda HOM05D005670 ORTHO05D007612 1.4e-11 73.2 62 54.8
arahy.Tifrunner.gnm1.ann1.RER6EK Arachis hypogaea HOM05D005670 ORTHO05D007612 3.1e-11 72.0 73 52.1
FAN08G0180 Fragaria x ananassa HOM05D005670 ORTHO05D007612 8.9e-11 70.5 65 53.8
Cc02_g13200 Coffea canephora HOM05D005670 ORTHO05D007612 9.9e-10 67.0 51 54.9
arahy.Tifrunner.gnm1.ann1.06VRVW Arachis hypogaea HOM05D005670 ORTHO05D007612 1.7e-09 66.2 73 49.3
FAN11G1478 Fragaria x ananassa HOM05D005670 ORTHO05D007612 1.7e-09 66.2 45 60.0
Pp3c2_7120 Physcomitrium patens HOM05D005670 ORTHO05D007612 3.8e-09 65.1 62 50.0
Mapoly0068s0105 Marchantia polymorpha HOM05D005670 ORTHO05D007612 8.4e-09 63.9 65 46.2
Mapoly0156s0028 Marchantia polymorpha HOM05D005670 ORTHO05D007612 8.4e-09 63.9 65 46.2
Pp3c14_11050 Physcomitrium patens HOM05D005670 ORTHO05D007612 1.9e-08 62.8 62 46.8
MCO09G610 Micromonas commoda HOM05D005670 ORTHO05D007612 1.7e-06 56.2 62 38.7
CBR_g34175 Chara braunii HOM05D005670 ORTHO05D007612 2.3e-06 55.8 66 40.9
SMO145G0108 Selaginella moellendorffii HOM05D005670 ORTHO05D007612 3.0e-06 55.5 86 37.2


User provided reference genes

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