Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 3.3e-167 591.7 305 100.0
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 6.8e-120 434.5 219 99.1
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-117 427.2 220 97.3
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-117 427.2 220 97.3
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 1.8e-117 426.4 220 97.3
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.0e-115 420.6 220 95.9
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 3.3e-114 415.6 220 95.5
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 5.6e-114 414.8 220 95.5
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 2.3e-112 409.5 220 94.5
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 2.3e-112 409.5 213 96.7
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 2.0e-111 406.4 220 93.6
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.7e-110 403.3 220 93.6
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.7e-110 403.3 220 93.6
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.2e-110 402.9 220 93.6
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 3.7e-110 402.1 220 93.2
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 3.7e-110 402.1 220 93.2
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 3.7e-110 402.1 220 93.2
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 2.4e-109 399.4 220 92.7
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 3.2e-109 399.1 220 92.7
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 7.0e-109 397.9 220 91.4
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 7.0e-109 397.9 220 91.4
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.6e-108 396.7 218 91.7
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.6e-108 396.7 218 91.7
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 2.7e-108 396.0 212 94.3
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 2.7e-108 396.0 212 94.3
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 5.9e-108 394.8 212 93.9
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 2.3e-107 392.9 212 93.9
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.6e-107 391.0 214 91.6
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 1.9e-106 389.8 214 91.6
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 3.3e-106 389.0 253 81.8
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 1.2e-105 387.1 209 94.3
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 6.2e-105 384.8 209 93.8
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 6.2e-105 384.8 209 93.8
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 6.2e-105 384.8 209 93.8
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 4.0e-104 382.1 214 91.6
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 8.9e-104 380.9 212 91.5
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 5.8e-103 378.3 214 90.2
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 8.3e-102 374.4 208 91.3
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 1.1e-101 374.0 201 94.5
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 7.8e-100 367.9 213 88.3
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 1.0e-99 367.5 204 91.7
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 3.0e-99 365.9 206 89.3
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 1.1e-98 364.0 203 92.1
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 1.5e-98 363.6 197 93.9
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 2.8e-97 359.4 201 89.6
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 1.4e-96 357.1 220 85.5
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 2.6e-95 352.8 209 88.0
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 5.4e-93 345.1 214 84.6
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.2e-93 344.4 211 86.3
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 5.6e-90 335.1 175 95.4
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 3.6e-89 332.4 192 87.5
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 5.8e-87 325.1 205 82.4
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 2.2e-86 323.2 172 94.2
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 2.2e-86 323.2 172 94.2
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 5.4e-85 318.5 171 93.6
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 4.6e-84 315.5 170 94.1
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 1.1e-80 304.3 172 91.3
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.4e-79 299.3 172 86.6
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.3e-78 297.4 153 97.4
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 8.4e-78 294.7 156 93.6
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.2e-77 292.4 178 83.7
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 1.7e-75 287.0 220 71.4
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.6e-73 280.4 166 86.7
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 9.0e-72 274.6 179 81.6
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 1.0e-67 261.2 158 86.7
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-64 251.1 242 59.1
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.8e-64 250.4 133 94.0
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 6.0e-60 235.3 124 95.2
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 7.9e-60 235.0 139 86.3
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.8e-59 233.8 130 90.8
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 1.7e-54 217.2 120 96.7
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 2.7e-52 209.9 112 92.0
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 6.3e-49 198.7 109 91.7
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 8.2e-49 198.4 109 90.8
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 4.1e-48 196.1 118 83.1
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 1.0e-46 191.4 98 96.9
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 2.9e-46 189.9 107 91.6
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 9.3e-45 184.9 108 87.0
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 6.3e-41 172.2 176 59.7
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 4.1e-40 169.5 98 86.7
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.5e-39 167.5 88 93.2
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 5.9e-39 165.6 110 77.3
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 3.0e-35 153.3 101 81.2
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 3.3e-34 149.8 79 96.2
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 7.4e-34 148.7 77 92.2
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 2.2e-33 147.1 75 94.7
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 6.3e-33 145.6 73 95.9
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.7e-30 137.5 72 90.3
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.0e-30 136.0 68 95.6
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 2.7e-28 130.2 154 45.5
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 8.0e-28 128.6 69 88.4
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.4e-27 127.9 79 86.1
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 1.1e-26 124.8 68 92.6
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.6e-26 123.6 79 79.7
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 4.8e-25 119.4 60 96.7
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.2e-23 114.8 69 84.1
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 2.2e-22 110.5 65 83.1
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.7e-18 95.9 59 83.1
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 2.4e-16 90.5 54 83.3
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 5.9e-15 85.9 132 45.5
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.2e-14 84.0 55 78.2
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 1.4e-11 74.7 37 97.3
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 4.4e-10 69.7 39 87.2
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 9.8e-10 68.6 44 79.5
Aqoxy4G01620 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.3e-09 68.2 43 83.7
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.4e-08 64.7 46 73.9


User provided reference genes

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