Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 6.9e-110 400.6 193 100.0
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 4.6e-106 387.9 191 96.3
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 6.0e-106 387.5 189 96.8
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.7e-105 383.6 193 95.3
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.7e-105 383.6 193 95.3
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 2.5e-104 382.1 187 96.8
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 3.3e-104 381.7 193 94.8
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 3.3e-104 381.7 188 95.2
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 9.6e-104 380.2 189 93.1
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 9.6e-104 380.2 190 93.7
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.3e-103 379.8 191 93.2
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 2.8e-103 378.6 201 91.0
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 3.6e-103 378.3 187 94.7
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.6e-103 378.3 189 93.1
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 3.6e-103 378.3 185 96.2
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 8.1e-103 377.1 187 94.7
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 8.1e-103 377.1 187 94.1
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 8.1e-103 377.1 190 93.2
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 1.1e-102 376.7 185 95.7
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 1.4e-102 376.3 189 93.1
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 1.4e-102 376.3 187 95.7
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 2.4e-102 375.6 190 92.6
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 4.0e-102 374.8 189 92.1
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 6.9e-102 374.0 188 93.1
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 6.9e-102 374.0 187 95.2
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 6.9e-102 374.0 189 91.5
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 9.0e-102 373.6 185 95.1
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.2e-101 373.2 190 92.6
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.2e-101 373.2 190 92.6
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.2e-101 373.2 186 93.5
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 1.5e-101 372.9 190 92.1
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 1.5e-101 372.9 190 92.1
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 2.6e-101 372.1 190 93.2
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 2.6e-101 372.1 190 92.1
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 2.6e-101 372.1 188 92.6
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 3.4e-101 371.7 187 92.0
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 4.5e-101 371.3 184 92.9
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 4.5e-101 371.3 191 91.6
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 4.5e-101 371.3 187 92.0
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 5.8e-101 370.9 189 90.5
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 5.8e-101 370.9 186 91.9
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 7.6e-101 370.5 190 92.1
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 7.6e-101 370.5 190 92.6
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 7.6e-101 370.5 190 91.6
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 7.6e-101 370.5 186 91.9
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 7.6e-101 370.5 186 91.4
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 9.9e-101 370.2 187 92.0
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 9.9e-101 370.2 186 90.9
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 9.9e-101 370.2 185 93.0
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 9.9e-101 370.2 190 91.6
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.3e-100 369.8 185 93.0
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 1.7e-100 369.4 187 91.4
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 1.7e-100 369.4 187 91.4
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 1.7e-100 369.4 187 91.4
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 1.7e-100 369.4 190 91.6
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 190 91.6
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 190 91.6
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 190 91.6
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.7e-100 369.4 190 91.6
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 1.7e-100 369.4 190 91.6
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 2.2e-100 369.0 188 89.9
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 2.2e-100 369.0 186 91.4
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 2.2e-100 369.0 187 92.0
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 2.9e-100 368.6 190 90.5
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 2.9e-100 368.6 186 91.9
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 2.9e-100 368.6 186 91.9
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 2.9e-100 368.6 185 93.0
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.9e-100 368.6 189 91.5
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 3.8e-100 368.2 190 91.1
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 4.9e-100 367.9 186 90.9
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 6.4e-100 367.5 188 91.0
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 6.4e-100 367.5 188 89.9
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 8.4e-100 367.1 185 93.5
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 8.4e-100 367.1 188 90.4
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 8.4e-100 367.1 185 91.4
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 8.4e-100 367.1 186 91.9
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 8.4e-100 367.1 189 90.5
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 1.1e-99 366.7 185 93.5
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.1e-99 366.7 190 91.6
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 1.4e-99 366.3 186 90.9
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 1.4e-99 366.3 186 91.4
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 1.9e-99 365.9 188 89.9
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 1.9e-99 365.9 189 90.5
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 1.9e-99 365.9 189 90.5
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 2.4e-99 365.5 189 91.0
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 2.4e-99 365.5 185 93.0
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 3.2e-99 365.2 190 91.6
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 5.4e-99 364.4 190 91.1
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 5.4e-99 364.4 190 91.1
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 5.4e-99 364.4 185 90.8
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 7.1e-99 364.0 183 92.9
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 7.1e-99 364.0 183 91.3
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 9.3e-99 363.6 185 93.0
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 9.3e-99 363.6 186 89.8
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 1.2e-98 363.2 209 82.8
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 1.6e-98 362.8 185 90.8
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.6e-98 362.8 189 89.4
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.6e-98 362.8 189 89.4
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 2.1e-98 362.5 189 89.4
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 2.1e-98 362.5 183 92.3
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 2.7e-98 362.1 188 88.3
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 2.7e-98 362.1 188 88.3
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 2.7e-98 362.1 188 88.3
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 4.6e-98 361.3 188 88.3
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 4.6e-98 361.3 193 88.1
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 7.9e-98 360.5 188 88.3
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 1.0e-97 360.1 190 89.5
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 1.0e-97 360.1 188 88.8
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 1.8e-97 359.4 187 88.2
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 1.8e-97 359.4 188 87.8
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 1.8e-97 359.4 189 89.4
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.3e-97 359.0 185 89.7
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 2.3e-97 359.0 188 87.8
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 2.3e-97 359.0 188 87.8
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 3.9e-97 358.2 188 87.2
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 3.9e-97 358.2 188 87.2
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 5.1e-97 357.8 189 86.2
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 6.7e-97 357.5 188 86.7
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 8.7e-97 357.1 188 86.2
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 8.7e-97 357.1 186 88.7
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 1.1e-96 356.7 191 88.5
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 1.5e-96 356.3 188 87.2
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 1.5e-96 356.3 188 87.2
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 1.5e-96 356.3 188 87.2
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 5.6e-96 354.4 188 86.7
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 5.6e-96 354.4 188 86.7
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 1.6e-95 352.8 185 88.1
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 6.2e-95 350.9 182 89.0
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 1.4e-94 349.7 188 85.6
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 3.1e-94 348.6 188 85.1
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 5.3e-94 347.8 188 85.6
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 1.5e-93 346.3 187 84.5
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.6e-93 345.5 189 89.4
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 7.6e-93 344.0 189 85.7
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 1.3e-92 343.2 181 87.3
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 1.7e-92 342.8 182 87.4
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 1.9e-91 339.3 253 67.6
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 8.7e-89 330.5 187 80.2
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 1.6e-87 326.2 182 84.1
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 3.7e-87 325.1 191 80.1
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 6.9e-86 320.9 168 89.9
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 9.0e-86 320.5 188 84.0
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 3.9e-81 305.1 152 90.8
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 1.9e-75 286.2 142 93.0
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 7.2e-75 284.3 143 92.3
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 1.8e-73 279.6 140 92.9
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.0e-72 276.2 130 97.7
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.7e-71 273.1 141 89.4
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.5e-69 265.0 194 72.2
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 1.4e-67 260.0 188 72.9
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 1.0e-65 253.8 128 86.7
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.8e-65 253.1 163 76.7
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 2.0e-64 249.6 136 83.8
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 1.7e-63 246.5 151 77.5
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 1.1e-59 233.8 188 55.9
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 3.6e-58 228.8 189 57.1
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 4.8e-55 218.4 166 69.3
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 7.5e-48 194.5 157 65.0
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.5e-45 185.3 90 94.4
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.3e-44 183.7 90 90.0
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.5e-43 179.5 90 88.9
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 2.3e-41 172.9 87 87.4
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 6.8e-41 171.4 103 75.7
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 8.8e-41 171.0 87 86.2
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 1.5e-40 170.2 87 86.2
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.4e-40 168.7 157 58.0
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 5.7e-40 168.3 87 86.2
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 9.8e-40 167.5 87 85.1
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 9.8e-40 167.5 87 85.1
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 2.3e-36 156.4 87 82.8
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 1.5e-35 153.7 141 58.2
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 1.6e-34 150.2 96 77.1
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.8e-33 146.7 79 82.3
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 1.3e-31 140.6 69 82.6
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 2.4e-30 136.3 70 92.9
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.5e-27 124.4 62 85.5
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.5e-27 124.4 62 85.5
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.5e-27 124.4 62 85.5
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.5e-27 124.4 62 85.5
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.5e-27 124.4 62 85.5
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.5e-27 124.4 62 85.5
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 7.5e-16 88.2 49 91.8
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 2.9e-15 86.3 44 88.6
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 1.6e-13 80.5 44 86.4


User provided reference genes

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