Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 4.8e-191 671.0 341 100.0
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 9.7e-176 620.2 341 91.2
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.2e-175 619.0 342 90.9
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.2e-175 619.0 342 90.9
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.4e-169 599.7 343 88.6
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 7.5e-168 594.0 341 87.4
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 9.8e-168 593.6 343 88.0
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.3e-167 593.2 341 87.4
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 5.4e-166 587.8 342 87.1
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 9.1e-166 587.0 343 87.5
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 4.2e-163 578.2 342 85.4
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 4.2e-163 578.2 323 88.9
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 5.5e-163 577.8 341 85.3
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 5.5e-163 577.8 343 84.5
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 2.1e-162 575.9 342 85.7
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 2.1e-162 575.9 351 83.8
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 6.1e-162 574.3 342 85.7
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 1.0e-161 573.5 347 83.0
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 1.4e-161 573.2 345 83.5
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.8e-161 572.8 342 85.4
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.8e-161 572.8 345 83.2
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.0e-161 571.6 344 83.4
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 5.2e-161 571.2 344 85.8
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 5.2e-161 571.2 341 84.8
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 5.2e-161 571.2 344 83.4
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 5.2e-161 571.2 346 83.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 6.8e-161 570.9 343 84.3
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 8.8e-161 570.5 348 82.5
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 1.5e-160 569.7 353 81.3
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 2.0e-160 569.3 348 82.2
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 2.6e-160 568.9 345 83.8
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 5.7e-160 567.8 345 83.2
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 9.8e-160 567.0 342 83.3
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 1.7e-159 566.2 355 80.6
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 6.3e-159 564.3 345 82.3
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.8e-158 562.8 346 82.1
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.8e-158 562.8 346 82.4
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.8e-158 562.8 345 82.3
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 2.4e-158 562.4 342 83.6
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 3.1e-158 562.0 341 82.7
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 3.1e-158 562.0 341 83.0
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 4.1e-158 561.6 326 86.5
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.1e-158 561.6 344 84.3
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 4.1e-158 561.6 323 86.7
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 4.1e-158 561.6 345 82.6
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 7.0e-158 560.8 342 82.5
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.2e-157 560.1 341 82.7
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.2e-157 560.1 347 81.6
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.2e-157 560.1 345 82.3
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 1.6e-157 559.7 348 80.2
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 2.0e-157 559.3 348 80.2
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 2.0e-157 559.3 329 83.3
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 3.5e-157 558.5 340 82.6
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 5.9e-157 557.8 348 81.6
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 5.9e-157 557.8 347 81.3
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 7.7e-157 557.4 349 81.1
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 7.7e-157 557.4 346 81.5
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 1.0e-156 557.0 345 81.4
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.0e-156 557.0 345 81.7
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.7e-156 556.2 347 81.0
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 8.6e-156 553.9 369 77.5
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 1.5e-155 553.1 338 82.5
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 1.5e-155 553.1 364 77.7
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 3.3e-155 552.0 339 82.0
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.3e-155 551.6 350 81.4
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 4.3e-155 551.6 345 81.7
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 5.6e-155 551.2 353 80.2
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 9.5e-155 550.4 339 81.4
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.6e-154 549.7 344 80.5
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 2.8e-154 548.9 341 80.6
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 2.8e-154 548.9 351 79.5
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.6e-154 548.5 344 83.4
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 6.1e-154 547.7 353 79.0
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 8.0e-154 547.4 350 79.7
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.3e-153 545.8 341 80.6
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.0e-153 545.0 330 83.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 4.0e-153 545.0 348 81.0
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 1.7e-151 539.7 359 78.0
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.4e-150 536.6 343 80.2
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 1.8e-150 536.2 343 79.9
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.8e-150 536.2 343 78.1
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 2.4e-150 535.8 341 80.1
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 7.0e-150 534.3 337 80.4
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 9.2e-150 533.9 343 79.3
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.6e-149 533.1 344 79.9
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 2.7e-149 532.3 363 76.9
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 7.8e-149 530.8 326 82.5
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 3.9e-148 528.5 346 77.7
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 7.3e-147 524.2 341 77.4
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 7.3e-147 524.2 341 77.4
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 2.1e-146 522.7 351 75.8
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.8e-146 522.3 349 75.6
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.8e-146 522.3 349 75.6
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 2.8e-146 522.3 349 75.9
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 2.8e-146 522.3 343 77.0
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 3.6e-146 521.9 341 76.5
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 3.6e-146 521.9 341 76.5
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 3.6e-146 521.9 341 76.5
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 4.7e-146 521.5 350 75.7
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 6.2e-146 521.2 346 77.2
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 1.4e-145 520.0 351 75.5
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 4.0e-145 518.5 355 74.4
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 5.2e-145 518.1 347 75.8
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 5.2e-145 518.1 353 73.9
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 5.2e-145 518.1 344 76.5
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 6.8e-145 517.7 341 76.2
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.4e-144 515.0 344 80.2
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 1.7e-143 513.1 354 73.7
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.9e-142 509.6 323 78.0
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 1.9e-142 509.6 346 74.9
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 1.2e-141 506.9 362 72.1
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 2.3e-140 502.7 341 73.6
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 4.3e-139 498.4 384 69.5
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.1e-137 492.3 299 81.9
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 5.2e-137 491.5 340 75.3
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 6.8e-137 491.1 341 74.8
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 3.2e-134 482.3 349 72.5
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.2e-134 482.3 345 71.9
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.5e-133 478.8 344 70.6
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 7.8e-133 477.6 323 76.5
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 1.7e-132 476.5 347 71.8
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 1.7e-132 476.5 347 71.8
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 2.5e-131 472.6 345 69.0
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.3e-131 471.9 341 72.1
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 1.2e-130 470.3 346 68.2
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 2.8e-130 469.2 271 86.3
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 2.8e-130 469.2 271 86.3
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 4.7e-130 468.4 320 70.6
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.1e-129 465.7 325 70.2
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 3.1e-129 465.7 348 66.7
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 4.0e-129 465.3 344 71.5
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.2e-125 453.8 315 70.2
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 7.3e-123 444.5 315 68.9
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 2.1e-122 443.0 271 81.2
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.6e-116 421.4 318 65.1
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.4e-113 413.7 322 63.7
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.0e-112 409.8 327 61.8
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 6.0e-109 398.3 231 84.0
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.6e-101 372.1 228 78.9
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 5.1e-100 368.6 255 72.9
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.1e-92 342.0 198 83.3
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 1.0e-87 327.8 196 82.7
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 5.0e-87 325.5 298 57.0
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.3e-82 310.8 246 66.7
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 8.2e-74 281.6 185 80.0
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.2e-70 269.2 182 70.3
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.2e-70 269.2 182 70.3
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.7e-60 235.3 165 67.9
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 8.2e-58 228.4 137 81.8
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 1.4e-57 227.6 123 90.2
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 5.3e-57 225.7 131 84.0
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.2e-55 220.3 122 82.0
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 2.9e-47 193.4 164 63.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 4.2e-46 189.5 164 63.4
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 5.2e-44 182.6 164 61.6
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.4e-41 172.6 145 61.4
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 6.6e-31 139.0 118 66.1
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.8e-29 133.7 172 47.7
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 6.8e-28 129.0 92 71.7
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 8.9e-28 128.6 92 73.9
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 1.3e-26 124.8 70 87.1
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 2.1e-21 107.5 71 74.6
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 8.1e-21 105.5 78 66.7
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.7e-18 97.8 118 47.5
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.6e-16 91.3 145 44.1
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 7.8e-16 89.0 78 57.7
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 4.4e-11 73.2 51 72.5
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 7.1e-09 65.9 42 81.0
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 1.1e-06 58.5 36 66.7
RhsimUnG0176100 Rhododendron simsii HOM05D000026 ORTHO05D000127 2.5e-06 57.4 53 60.4


User provided reference genes

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