Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05740 Davidia involucrata HOM05D001439 ORTHO05D007599 2.1e-39 165.2 82 100.0
Dinv30126 Davidia involucrata HOM05D001439 ORTHO05D007599 3.8e-33 144.4 80 90.0
Lalb_Chr09g0331921 Lupinus albus HOM05D001439 ORTHO05D007599 7.8e-31 136.7 81 82.7
CiPaw.04G180100 Carya illinoinensis HOM05D001439 ORTHO05D007599 1.0e-30 136.3 76 85.5
Sabra14G0132600 Salix brachista HOM05D001439 ORTHO05D007599 1.3e-30 136.0 80 80.0
DCAR_028382 Daucus carota HOM05D001439 ORTHO05D007599 1.7e-30 135.6 80 82.5
Hma1.2p1_0345F.1_g131230 Hydrangea macrophylla HOM05D001439 ORTHO05D007599 1.7e-30 135.6 80 83.8
Hma1.2p1_0345F.1_g131250 Hydrangea macrophylla HOM05D001439 ORTHO05D007599 1.7e-30 135.6 80 83.8
QL04p042996 Quercus lobata HOM05D001439 ORTHO05D007599 1.7e-30 135.6 76 84.2
Ca_17413_v3 Cicer arietinum L. HOM05D001439 ORTHO05D007599 2.3e-30 135.2 80 82.5
Lj2A362T44 Lonicera japonica HOM05D001439 ORTHO05D007599 2.3e-30 135.2 80 82.5
Glyma.05G221500 Glycine max HOM05D001439 ORTHO05D007599 3.0e-30 134.8 80 81.2
Potri.014G173300 Populus trichocarpa HOM05D001439 ORTHO05D007599 6.6e-30 133.7 80 80.0
TPR.G22823 Trifolium pratense HOM05D001439 ORTHO05D007599 6.6e-30 133.7 80 82.5
Glyma.08G028000 Glycine max HOM05D001439 ORTHO05D007599 8.7e-30 133.3 80 81.2
Eucgr.K01361 Eucalyptus grandis HOM05D001439 ORTHO05D007599 1.5e-29 132.5 76 82.9
Psat7g021400 Pisum sativum HOM05D001439 ORTHO05D007599 1.9e-29 132.1 80 81.2
Nn4g24992 Nelumbo nucifera HOM05D001439 ORTHO05D007599 2.5e-29 131.7 77 84.4
RcHm_v2.0_Chr2g0148261 Rosa chinensis HOM05D001439 ORTHO05D007599 2.5e-29 131.7 79 81.0
Haze_24510 Corylus avellana HOM05D001439 ORTHO05D007599 3.3e-29 131.3 76 82.9
FAN05G2787 Fragaria x ananassa HOM05D001439 ORTHO05D007599 3.3e-29 131.3 80 80.0
FAN09G0293 Fragaria x ananassa HOM05D001439 ORTHO05D007599 3.3e-29 131.3 79 81.0
Lalb_Chr05g0223731 Lupinus albus HOM05D001439 ORTHO05D007599 4.3e-29 131.0 81 80.2
arahy.Tifrunner.gnm1.ann1.0SQJ2Y Arachis hypogaea HOM05D001439 ORTHO05D007599 7.3e-29 130.2 75 84.0
arahy.Tifrunner.gnm1.ann1.CH5A50 Arachis hypogaea HOM05D001439 ORTHO05D007599 7.3e-29 130.2 75 84.0
Thecc.01G203900 Theobroma cacao HOM05D001439 ORTHO05D007599 7.3e-29 130.2 80 78.8
FvH4_6g36260 Fragaria vesca HOM05D001439 ORTHO05D007599 9.6e-29 129.8 79 79.7
TAR375G1143 Trochodendron aralioides HOM05D001439 ORTHO05D007599 1.3e-28 129.4 80 76.2
Lj4g0024460 Lotus japonicus HOM05D001439 ORTHO05D007599 1.6e-28 129.0 79 79.7
PGR044G2616 Punica granatum HOM05D001439 ORTHO05D007599 1.6e-28 129.0 77 76.6
GSVIVG01036776001 Vitis vinifera HOM05D001439 ORTHO05D007599 1.6e-28 129.0 72 88.9
VMungo0251G2358 Vigna mungo HOM05D001439 ORTHO05D007599 2.1e-28 128.6 74 83.8
Phvul.002G303200 Phaseolus vulgaris HOM05D001439 ORTHO05D007599 2.8e-28 128.3 80 78.8
CANSAT56G2417 Cannabis sativa HOM05D001439 ORTHO05D007599 3.6e-28 127.9 80 80.0
Actinidia06779 Actinidia chinensis HOM05D001439 ORTHO05D007599 4.8e-28 127.5 72 87.5
CSS0026010 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D007599 4.8e-28 127.5 73 86.3
MD17G1156400 Malus domestica HOM05D001439 ORTHO05D007599 4.8e-28 127.5 79 78.5
CsaV3_7G023680 Cucumis sativus L. HOM05D001439 ORTHO05D007599 6.2e-28 127.1 81 71.6
Duzib138G1511 Durio zibethinus HOM05D001439 ORTHO05D007599 6.2e-28 127.1 74 81.1
Psat0s3647g0040 Pisum sativum HOM05D001594 ORTHO05D002862 8.1e-28 126.7 80 76.2
Rhsim09G0138700 Rhododendron simsii HOM05D001439 ORTHO05D007599 8.1e-28 126.7 71 85.9
FAN02G0189 Fragaria x ananassa HOM05D001439 ORTHO05D007599 1.1e-27 126.3 79 77.2
Manes.12G058700 Manihot esculenta HOM05D001439 ORTHO05D007599 1.1e-27 126.3 75 80.0
Ciclev10014094m.g Citrus clementina HOM05D001439 ORTHO05D007599 1.4e-27 125.9 69 88.4
Duzib133G1111 Durio zibethinus HOM05D001439 ORTHO05D007599 2.4e-27 125.2 75 78.7
Actinidia03300 Actinidia chinensis HOM05D001439 ORTHO05D007599 3.1e-27 124.8 72 87.5
BcaB04g17209 Brassica carinata HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
BcaC01g01268 Brassica carinata HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
BcaC02g08708 Brassica carinata HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
A08p02880 Brassica napus HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
C03p90000 Brassica napus HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
C04p51450 Brassica napus HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
BolC3t21320H Brassica oleracea HOM05D001439 ORTHO05D007599 3.1e-27 124.8 71 81.7
CARHR218110 Cardamine hirsuta HOM05D001439 ORTHO05D007599 3.1e-27 124.8 79 72.2
MBI18_g11240_MAGBIO Magnolia biondii HOM05D001439 ORTHO05D007599 3.1e-27 124.8 76 77.6
Atru.chr6.3472 Acer truncatum HOM05D001439 ORTHO05D007599 4.0e-27 124.4 69 84.1
Gohir.A11G145900 Gossypium hirsutum HOM05D001439 ORTHO05D007599 4.0e-27 124.4 74 79.7
Gohir.D11G152000 Gossypium hirsutum HOM05D001439 ORTHO05D007599 4.0e-27 124.4 74 79.7
Gorai.007G162700 Gossypium raimondii HOM05D001439 ORTHO05D007599 4.0e-27 124.4 74 79.7
MD09G1170800 Malus domestica HOM05D001439 ORTHO05D007599 4.0e-27 124.4 71 85.9
Lsat_1_v5_gn_2_107580 Lactuca sativa HOM05D001439 ORTHO05D007599 5.3e-27 124.0 74 81.1
Sed0014026 Sechium edule HOM05D001439 ORTHO05D007599 5.3e-27 124.0 79 73.4
AT4G12750 Arabidopsis thaliana HOM05D001439 ORTHO05D007599 6.9e-27 123.6 75 76.0
MELO3C024106.2 Cucumis melo HOM05D001439 ORTHO05D007599 6.9e-27 123.6 71 76.1
Sp7g09140 Schrenkiella parvula HOM05D001439 ORTHO05D007599 6.9e-27 123.6 71 80.3
Carub.0007s3007 Capsella rubella HOM05D001439 ORTHO05D007599 9.0e-27 123.2 71 78.9
Aa31sc565G40 Aethionema arabicum HOM05D001439 ORTHO05D007599 1.2e-26 122.9 71 80.3
BraA08t32320Z Brassica rapa HOM05D001439 ORTHO05D007599 2.0e-26 122.1 71 80.3
AL9U11900 Arabidopsis lyrata HOM05D001439 ORTHO05D007599 3.4e-26 121.3 70 80.0
TWI18G1300 Tripterygium wilfordii HOM05D001439 ORTHO05D007599 4.5e-26 120.9 80 73.8
ECA238G3650 Erigeron canadensis HOM05D001439 ORTHO05D007599 7.6e-26 120.2 70 81.4
Thhalv10024262m.g Eutrema salsugineum HOM05D001439 ORTHO05D007599 7.6e-26 120.2 71 77.5
Aqoxy1G03116 Aquilegia oxysepala HOM05D001439 ORTHO05D007599 1.3e-25 119.4 75 73.3
Peaxi162Scf00120g00521 Petunia axillaris HOM05D001439 ORTHO05D007599 2.9e-25 118.2 71 78.9
HanXRQChr14g0455641 Helianthus annuus HOM05D001439 ORTHO05D007599 3.8e-25 117.9 72 73.6
PGSC0003DMG400000999 Solanum tuberosum HOM05D001439 ORTHO05D007599 4.9e-25 117.5 69 79.7
TWI36G0060 Tripterygium wilfordii HOM05D001439 ORTHO05D007599 4.9e-25 117.5 72 77.8
EL10Ac4g08849 Beta vulgaris HOM05D001439 ORTHO05D007599 1.9e-24 115.5 73 72.6
PSO063G6089 Papaver somniferum HOM05D001439 ORTHO05D007599 1.9e-24 115.5 80 70.0
PSO782G0625 Papaver somniferum HOM05D001439 ORTHO05D007599 3.2e-24 114.8 80 70.0
Solyc11g006200.2 Solanum lycopersicum HOM05D001439 ORTHO05D007599 3.2e-24 114.8 69 78.3
Sopen11g002130 Solanum pennellii HOM05D001439 ORTHO05D007599 3.2e-24 114.8 69 78.3
Nitab4.5_0003799g0010 Nicotiana tabacum HOM05D001439 ORTHO05D007599 4.2e-24 114.4 71 74.6
Sc09g0004660 Simmondsia chinensis HOM05D001439 ORTHO05D007599 4.2e-24 114.4 75 70.7
THA.LOC104815378 Tarenaya hassleriana HOM05D001439 ORTHO05D007599 5.4e-24 114.0 71 74.6
Cc02_g09100 Coffea canephora HOM05D001439 ORTHO05D007599 1.6e-23 112.5 74 77.0
THA.LOC104826638 Tarenaya hassleriana HOM05D001439 ORTHO05D007599 1.6e-23 112.5 71 76.1
COL.COLO4_19723 Corchorus olitorius HOM05D001439 ORTHO05D007599 2.1e-23 112.1 98 60.2
FAN14G5823 Fragaria x ananassa HOM05D001439 ORTHO05D007599 2.7e-23 111.7 115 54.8
Oeu016030.1 Olea europaea HOM05D001439 ORTHO05D007599 2.7e-23 111.7 68 75.0
FAN14G5546 Fragaria x ananassa HOM05D001439 ORTHO05D007599 3.5e-23 111.3 115 54.8
vmacro10348 Vaccinium macrocarpon HOM05D001439 ORTHO05D007599 4.6e-23 110.9 73 76.7
CAN.G1256.6 Capsicum annuum HOM05D001439 ORTHO05D007599 7.9e-23 110.2 67 76.1
Psat6g093800 Pisum sativum HOM05D001439 ORTHO05D007599 7.9e-23 110.2 71 74.6
Oeu012227.1 Olea europaea HOM05D001439 ORTHO05D007599 1.0e-22 109.8 70 71.4
HanXRQChr07g0200581 Helianthus annuus HOM05D001439 ORTHO05D007599 1.3e-22 109.4 70 70.0
AUR62035538 Chenopodium quinoa HOM05D001439 ORTHO05D007599 3.0e-22 108.2 77 64.9
Migut.F00815 Erythranthe guttata HOM05D001439 ORTHO05D007599 3.9e-22 107.8 68 73.5
ATR1098G049 Amborella trichopoda HOM05D001439 ORTHO05D007599 5.1e-22 107.5 71 71.8
AUR62037546 Chenopodium quinoa HOM05D001439 ORTHO05D007599 5.1e-22 107.5 75 66.7
Zm00001eb061430 Zea mays HOM05D001439 ORTHO05D007599 5.1e-22 107.5 75 70.7
Hund22225 Selenicereus undatus HOM05D001439 ORTHO05D007599 1.5e-21 105.9 75 68.0
MSTRG.9529 Avicennia marina HOM05D001439 ORTHO05D007599 1.9e-21 105.5 69 72.5
Cpa.g.sc8.11 Carica papaya HOM05D001439 ORTHO05D007599 7.4e-21 103.6 70 72.9
SalBow3G1926 Salvia bowleyana HOM05D001439 ORTHO05D007599 1.3e-20 102.8 68 72.1
Cfa002303 Carpinus fangiana HOM05D001439 ORTHO05D007599 2.1e-20 102.1 76 69.7
HPP92_025328 Vanilla planifolia HOM05D001439 ORTHO05D007599 3.7e-20 101.3 71 69.0
SGA_v2.0_scaffold90G27703 Striga asiatica HOM05D000200 ORTHO05D000262 1.8e-19 99.0 68 70.6
MSTRG.9006 Avicennia marina HOM05D001439 ORTHO05D007599 3.1e-19 98.2 77 62.3
Psat0s2790g0120 Pisum sativum HOM05D003679 ORTHO05D004265 2.6e-18 95.1 58 79.3
Nitab4.5_0005417g0010 Nicotiana tabacum HOM05D001439 ORTHO05D007599 1.7e-17 92.4 57 73.7
SHI10198 Sapria himalayana HOM05D001439 ORTHO05D007599 2.2e-17 92.0 106 46.2
ClCG09G010560 Citrullus lanatus HOM05D001439 ORTHO05D007599 2.9e-17 91.7 81 54.3
SEGI_20521 Sequoiadendron giganteum HOM05D001439 ORTHO05D007599 2.5e-16 88.6 73 53.4
unitig_46.g18727 Utricularia gibba HOM05D001439 ORTHO05D007599 2.1e-15 85.5 67 62.7
CDE02G3848 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 1.6e-12 75.9 70 50.0
Psat0s2790g0080 Pisum sativum HOM05D003679 ORTHO05D004265 2.1e-12 75.5 67 58.2
CDE01G0356 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 4.0e-11 71.2 48 68.8
SEGI_30380 Sequoiadendron giganteum HOM05D001439 ORTHO05D002726 1.3e-06 56.2 66 40.9
SEGI_39795 Sequoiadendron giganteum HOM05D001439 ORTHO05D002726 1.3e-06 56.2 66 40.9


User provided reference genes

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