Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 1.2e-88 330.1 207 100.0
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 6.3e-85 317.8 212 95.8
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 1.1e-73 280.4 214 78.5
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 2.0e-67 259.6 217 76.5
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 5.9e-67 258.1 213 77.9
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 4.2e-65 251.9 213 69.5
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 1.6e-64 250.0 213 70.0
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 3.6e-64 248.8 213 72.8
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 6.1e-64 248.1 211 69.7
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 1.8e-63 246.5 213 70.0
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 8.8e-63 244.2 214 68.7
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 3.3e-62 242.3 214 70.1
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 6.3e-61 238.0 226 65.5
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 1.8e-60 236.5 215 67.4
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 2.7e-59 232.6 221 74.2
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 2.7e-59 232.6 221 74.2
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 2.7e-59 232.6 221 67.0
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 5.9e-59 231.5 213 77.5
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 1.0e-58 230.7 213 69.5
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 1.0e-58 230.7 213 73.7
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 1.3e-58 230.3 213 68.1
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 3.8e-58 228.8 223 70.9
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 8.5e-58 227.6 213 75.6
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 8.5e-58 227.6 213 65.7
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 8.5e-58 227.6 213 77.0
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 1.1e-57 227.3 217 68.2
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 5.5e-57 224.9 213 64.8
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 7.2e-57 224.6 231 68.0
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 9.4e-57 224.2 213 73.7
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 9.4e-57 224.2 213 73.7
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 1.6e-56 223.4 233 59.7
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 2.1e-56 223.0 235 69.4
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 2.1e-56 223.0 235 69.4
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 2.1e-56 223.0 226 67.7
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 2.7e-56 222.6 213 69.0
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 3.6e-56 222.2 216 67.1
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.6e-56 222.2 213 65.3
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 3.6e-56 222.2 214 69.2
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 1.0e-55 220.7 235 65.1
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 1.0e-55 220.7 213 63.4
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.4e-55 220.3 229 56.8
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 1.8e-55 219.9 216 66.2
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 2.3e-55 219.5 213 66.7
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 5.2e-55 218.4 230 64.8
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 5.2e-55 218.4 229 59.0
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 5.2e-55 218.4 229 59.0
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 8.8e-55 217.6 214 65.0
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 1.5e-54 216.9 211 68.7
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 1.5e-54 216.9 213 64.8
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.0e-54 216.5 229 61.6
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 2.0e-54 216.5 229 59.4
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 3.4e-54 215.7 220 68.6
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 4.4e-54 215.3 229 64.2
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 5.7e-54 214.9 213 61.5
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 5.7e-54 214.9 215 68.4
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 7.5e-54 214.5 229 59.0
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 1.3e-53 213.8 216 66.2
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 1.3e-53 213.8 209 73.7
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 6.3e-53 211.5 213 60.1
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 6.3e-53 211.5 203 67.0
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 6.3e-53 211.5 221 62.4
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 1.1e-52 210.7 213 71.8
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 2.4e-52 209.5 194 64.9
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 4.1e-52 208.8 235 65.5
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 9.1e-52 207.6 238 64.3
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 9.1e-52 207.6 126 86.5
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 9.1e-52 207.6 213 61.0
Potri.001G073500 Populus trichocarpa HOM05D004341 ORTHO05D005075 2.0e-51 206.5 223 60.1
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 2.0e-51 206.5 255 64.3
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 3.5e-51 205.7 230 67.4
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 4.5e-51 205.3 213 61.0
Lj3g0018794 Lotus japonicus HOM05D004341 ORTHO05D005075 4.5e-51 205.3 222 69.8
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 1.3e-50 203.8 221 68.3
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 1.7e-50 203.4 213 72.3
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 5.0e-50 201.8 232 63.8
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 5.0e-50 201.8 127 81.9
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 6.5e-50 201.4 127 83.5
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 6.5e-50 201.4 213 70.0
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 8.6e-50 201.1 235 63.4
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 1.1e-49 200.7 219 60.3
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 1.9e-49 199.9 252 63.1
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 1.9e-49 199.9 212 70.8
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 4.2e-49 198.7 126 82.5
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 7.2e-49 198.0 126 82.5
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 1.6e-48 196.8 217 69.6
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 2.8e-48 196.1 213 59.2
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 6.1e-48 194.9 210 69.5
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 1.0e-47 194.1 221 57.0
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 5.2e-47 191.8 213 62.0
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 8.9e-47 191.0 220 65.9
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 1.2e-46 190.7 210 65.2
CANSAT78G0611 Cannabis sativa HOM05D004341 ORTHO05D005075 3.4e-46 189.1 122 80.3
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 4.4e-46 188.7 212 68.4
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 1.3e-45 187.2 193 72.5
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 2.8e-45 186.0 127 78.0
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 6.3e-45 184.9 202 59.4
Haze_05182 Corylus avellana HOM05D004341 ORTHO05D005075 9.2e-44 181.0 257 59.5
CARHR227110 Cardamine hirsuta HOM05D004341 ORTHO05D005075 1.6e-43 180.3 126 74.6
COL.COLO4_10402 Corchorus olitorius HOM05D004341 ORTHO05D005075 1.6e-43 180.3 226 51.8
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 1.6e-43 180.3 124 77.4
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 2.7e-43 179.5 130 79.2
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 1.0e-42 177.6 127 71.7
Thhalv10026240m.g Eutrema salsugineum HOM05D004341 ORTHO05D005075 1.3e-42 177.2 127 71.7
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 3.8e-42 175.6 127 70.9
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 5.0e-42 175.3 170 64.7
AT4G20280 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 1.1e-41 174.1 220 58.6
AL7G33620 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 2.5e-41 172.9 223 56.5
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 4.3e-41 172.2 125 70.4
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 5.6e-41 171.8 125 69.6
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 5.6e-41 171.8 125 69.6
Carub.0007s2089 Capsella rubella HOM05D004341 ORTHO05D005075 7.3e-41 171.4 218 56.4
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 7.3e-41 171.4 170 66.5
Sc19g0001970 Simmondsia chinensis HOM05D004341 ORTHO05D005075 1.2e-40 170.6 106 85.8
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 1.6e-40 170.2 125 69.6
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 2.1e-40 169.9 188 61.2
DCAR_007769 Daucus carota HOM05D004341 ORTHO05D005075 6.1e-40 168.3 202 52.5
Sp7g18640 Schrenkiella parvula HOM05D004341 ORTHO05D005075 2.3e-39 166.4 217 54.8
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 2.0e-38 163.3 194 67.5
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 1.3e-37 160.6 216 52.3
AT1G20000 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 1.4e-36 157.1 214 48.6
AL1G32730 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 2.7e-35 152.9 125 67.2
CiPaw.02G184500 Carya illinoinensis HOM05D004341 ORTHO05D005075 4.6e-35 152.1 207 50.2
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 1.3e-34 150.6 101 80.2
Pp3c14_26520 Physcomitrium patens HOM05D004341 ORTHO05D005075 5.0e-34 148.7 128 65.6
THA.LOC104812926 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 1.5e-33 147.1 215 50.7
A08p14740 Brassica napus HOM05D004341 ORTHO05D005075 7.3e-33 144.8 204 47.5
BraA08t33460Z Brassica rapa HOM05D004341 ORTHO05D005075 7.3e-33 144.8 204 47.5
Eucgr.G01564 Eucalyptus grandis HOM05D004341 ORTHO05D005075 7.3e-33 144.8 95 76.8
Dinv14194 Davidia involucrata HOM05D004341 ORTHO05D005075 3.6e-32 142.5 108 92.6
CBR_g22400 Chara braunii HOM05D004341 ORTHO05D005075 6.2e-32 141.7 126 59.5
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 8.0e-32 141.4 204 58.8
Mapoly0006s0068 Marchantia polymorpha HOM05D004341 ORTHO05D005075 1.4e-31 140.6 125 62.4
FAN07G2754 Fragaria x ananassa HOM05D004341 ORTHO05D005075 4.0e-31 139.0 109 70.6
BcaB04g18416 Brassica carinata HOM05D004341 ORTHO05D005075 6.8e-31 138.3 127 60.6
Oeu020262.1 Olea europaea HOM05D004341 ORTHO05D005075 1.2e-30 137.5 138 62.3
BcaB04g20244 Brassica carinata HOM05D004341 ORTHO05D005075 1.5e-30 137.1 216 44.4
Medtr0085s0030 Medicago truncatula HOM05D004341 ORTHO05D005075 8.3e-29 131.3 174 58.0
BcaB04g20259 Brassica carinata HOM05D004341 ORTHO05D005075 1.4e-28 130.6 131 58.0
TPR.G30192 Trifolium pratense HOM05D004341 ORTHO05D005075 1.6e-27 127.1 213 45.5
BcaB03g11664 Brassica carinata HOM05D004341 ORTHO05D005075 2.1e-27 126.7 208 51.0
BcaC09g49417 Brassica carinata HOM05D004341 ORTHO05D005075 6.0e-27 125.2 133 56.4
BolC1t03652H Brassica oleracea HOM05D004341 ORTHO05D005075 3.0e-26 122.9 222 39.6
CsaV3_3G003450 Cucumis sativus L. HOM05D004341 ORTHO05D005075 8.6e-26 121.3 146 58.2
Sabra01G0051800 Salix brachista HOM05D004341 ORTHO05D005075 8.6e-26 121.3 87 75.9
BcaC01g00664 Brassica carinata HOM05D004341 ORTHO05D005075 5.6e-25 118.6 128 53.9
Nitab4.5_0015757g0020 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.6e-24 115.9 137 59.1
SMO115G0310 Selaginella moellendorffii HOM05D004341 ORTHO05D005075 2.3e-23 113.2 103 58.3
FAN11G3831 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.0e-22 110.2 67 85.1
Haze_17072 Corylus avellana HOM05D000046 ORTHO05D005075 1.7e-21 107.1 225 44.9
Sc19g0001960 Simmondsia chinensis HOM05D004341 ORTHO05D005075 4.6e-19 99.0 108 77.8
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 3.6e-16 89.4 165 47.3
BcaB04g20257 Brassica carinata HOM05D004341 ORTHO05D005075 4.7e-16 89.0 79 62.0
PRCOL_00001421 Prasinoderma coloniale HOM05D004341 ORTHO05D005075 9.2e-12 74.7 88 46.6
Potri.003G157450 Populus trichocarpa HOM05D004341 ORTHO05D005075 3.5e-11 72.8 48 72.9
SEGI_17825 Sequoiadendron giganteum HOM05D004341 ORTHO05D005075 5.1e-10 68.9 147 49.0
TWI63G1746 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 8.7e-10 68.2 112 48.2
BolC3t20569H Brassica oleracea HOM05D001435 ORTHO05D001304 1.9e-09 67.0 65 52.3
Cre01.g011350 Chlamydomonas reinhardtii HOM05D004341 ORTHO05D005075 5.6e-09 65.5 120 36.7
TPR.G20312 Trifolium pratense HOM05D004341 ORTHO05D005075 5.6e-09 65.5 47 66.0
TPR.G36214 Trifolium pratense HOM05D004341 ORTHO05D005075 1.6e-08 63.9 35 82.9
MCO01G288 Micromonas commoda HOM05D004341 ORTHO05D005075 1.4e-07 60.8 94 43.6
arahy.Tifrunner.gnm1.ann1.W2JFNW Arachis hypogaea HOM05D004341 ORTHO05D005075 9.9e-06 54.7 34 73.5


User provided reference genes

Program Settings