Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04917 Davidia involucrata HOM05D000949 ORTHO05D184452 3.2e-81 305.1 159 100.0
CSS0041990 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D001276 6.8e-23 111.3 106 58.5
CSS0006323 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D038145 3.4e-22 109.0 111 59.5
CSS0028856 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D001276 3.4e-22 109.0 111 59.5
TAR374G1726 Trochodendron aralioides HOM05D000949 ORTHO05D001276 1.4e-20 103.6 111 56.8
Actinidia16021 Actinidia chinensis HOM05D000949 ORTHO05D001276 9.3e-20 100.9 111 55.9
TAR622G0089 Trochodendron aralioides HOM05D000949 ORTHO05D001276 9.3e-20 100.9 108 56.5
Rhsim12G0087600 Rhododendron simsii HOM05D000949 ORTHO05D001276 3.3e-17 92.4 110 50.0
Rhsim01G0213100 Rhododendron simsii HOM05D000949 ORTHO05D001276 2.8e-16 89.4 110 50.0
vmacro01418 Vaccinium macrocarpon HOM05D000949 ORTHO05D001276 1.8e-15 86.7 131 44.3
Nn2g15634 Nelumbo nucifera HOM05D000949 ORTHO05D001276 2.9e-13 79.3 112 46.4
Manes.01G015800 Manihot esculenta HOM05D000949 ORTHO05D001276 3.8e-13 79.0 131 42.0
Potri.015G043200 Populus trichocarpa HOM05D000949 ORTHO05D001276 1.1e-12 77.4 111 42.3
GSVIVG01011814001 Vitis vinifera HOM05D000949 ORTHO05D001276 1.1e-12 77.4 119 45.4
Atru.chr9.927 Acer truncatum HOM05D000949 ORTHO05D001276 2.4e-12 76.3 108 45.4
Dinv17525 Davidia involucrata HOM05D000949 ORTHO05D001276 2.4e-12 76.3 111 45.9
GSVIVG01008352001 Vitis vinifera HOM05D000949 ORTHO05D001276 5.4e-12 75.1 111 46.8
Cc04_g06780 Coffea canephora HOM05D000949 ORTHO05D001276 9.3e-12 74.3 111 45.0
Manes.05G137200 Manihot esculenta HOM05D000949 ORTHO05D001276 1.6e-11 73.6 113 44.2
Sabra15G0042100 Salix brachista HOM05D000949 ORTHO05D001276 2.1e-11 73.2 111 45.9
Ciclev10011139m.g Citrus clementina HOM05D000949 ORTHO05D001276 2.7e-11 72.8 106 45.3
QL10p026981 Quercus lobata HOM05D000949 ORTHO05D001276 3.5e-11 72.4 109 45.9
MD14G1231300 Malus domestica HOM05D000949 ORTHO05D001276 2.3e-10 69.7 108 42.6
MSTRG.2206 Avicennia marina HOM05D000949 ORTHO05D001276 1.1e-09 67.4 110 41.8
Cpa.g.sc3.454 Carica papaya HOM05D000949 ORTHO05D001276 1.1e-09 67.4 111 43.2
arahy.Tifrunner.gnm1.ann1.HKPY8E Arachis hypogaea HOM05D000949 ORTHO05D001276 1.9e-09 66.6 112 42.0
Thecc.03G044600 Theobroma cacao HOM05D000949 ORTHO05D001276 1.9e-09 66.6 109 43.1
Hma1.2p1_1612F.1_g293590 Hydrangea macrophylla HOM05D000949 ORTHO05D001276 2.5e-09 66.2 108 44.4
COL.COLO4_04946 Corchorus olitorius HOM05D000949 ORTHO05D001276 4.3e-09 65.5 106 39.6
Duzib187G0163 Durio zibethinus HOM05D000949 ORTHO05D001276 4.3e-09 65.5 108 41.7
arahy.Tifrunner.gnm1.ann1.594W3X Arachis hypogaea HOM05D000949 ORTHO05D001276 9.6e-09 64.3 112 41.1
Ca_25464_v3 Cicer arietinum L. HOM05D000949 ORTHO05D001276 1.6e-08 63.5 135 37.8
Lalb_Chr14g0370881 Lupinus albus HOM05D000949 ORTHO05D001276 1.6e-08 63.5 108 42.6
PSO063G2920 Papaver somniferum HOM05D000949 ORTHO05D001276 1.6e-08 63.5 109 45.0
Lj4g0024044 Lotus japonicus HOM05D000949 ORTHO05D001276 2.1e-08 63.2 110 40.0
MD06G1222200 Malus domestica HOM05D000949 ORTHO05D001276 6.2e-08 61.6 108 39.8
PSO832G2251 Papaver somniferum HOM05D000949 ORTHO05D001276 6.2e-08 61.6 109 44.0
TPR.G12777 Trifolium pratense HOM05D000949 ORTHO05D001276 6.2e-08 61.6 107 40.2
TPR.G38547 Trifolium pratense HOM05D000949 ORTHO05D001276 6.2e-08 61.6 107 41.1
Prupe.5G226600 Prunus persica HOM05D000949 ORTHO05D001276 1.1e-07 60.8 108 40.7
CiPaw.15G137900 Carya illinoinensis HOM05D000949 ORTHO05D001276 1.4e-07 60.5 108 38.9
Lalb_Chr16g0387271 Lupinus albus HOM05D000949 ORTHO05D001276 1.4e-07 60.5 112 38.4
Medtr6g082000 Medicago truncatula HOM05D000949 ORTHO05D001276 1.8e-07 60.1 107 41.1
Psat1g034160 Pisum sativum HOM05D000949 ORTHO05D001276 4.0e-07 58.9 108 39.8
Nitab4.5_0003886g0060 Nicotiana tabacum HOM05D000949 ORTHO05D001276 5.3e-07 58.5 98 41.8
Cfa019721 Carpinus fangiana HOM05D000949 ORTHO05D001276 9.0e-07 57.8 111 39.6
Peaxi162Scf00205g01218 Petunia axillaris HOM05D000949 ORTHO05D001276 9.0e-07 57.8 104 41.3
Duzib205G0274 Durio zibethinus HOM05D000949 ORTHO05D001276 1.2e-06 57.4 109 37.6
Eucgr.K02240 Eucalyptus grandis HOM05D000949 ORTHO05D001276 1.2e-06 57.4 108 38.0
Sc04g0003320 Simmondsia chinensis HOM05D000949 ORTHO05D001276 1.2e-06 57.4 107 43.0
EL10Ac3g07265 Beta vulgaris HOM05D000949 ORTHO05D001276 2.6e-06 56.2 112 42.9
Lj2g0027473 Lotus japonicus HOM05D000949 ORTHO05D001276 2.6e-06 56.2 102 41.2
Oeu048381.2 Olea europaea HOM05D000949 ORTHO05D001276 2.6e-06 56.2 104 44.2
FAN08G0431 Fragaria x ananassa HOM05D000949 ORTHO05D001276 4.5e-06 55.5 111 38.7
Phvul.009G204900 Phaseolus vulgaris HOM05D000949 ORTHO05D001276 4.5e-06 55.5 111 38.7
Actinidia24542 Actinidia chinensis HOM05D000949 ORTHO05D038145 5.8e-06 55.1 110 40.0
Duzib084G0139 Durio zibethinus HOM05D000949 ORTHO05D001276 5.8e-06 55.1 109 37.6
FAN04G1080 Fragaria x ananassa HOM05D000949 ORTHO05D001276 5.8e-06 55.1 111 38.7
Glyma.09G179500 Glycine max HOM05D000949 ORTHO05D001276 9.9e-06 54.3 111 38.7
Sopen05g004470 Solanum pennellii HOM05D000949 ORTHO05D001276 9.9e-06 54.3 108 40.7


User provided reference genes

Program Settings