Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04869 Davidia involucrata HOM05D003220 ORTHO05D003944 5.6e-62 240.7 119 100.0
Dinv11156 Davidia involucrata HOM05D003220 ORTHO05D003944 4.3e-30 134.8 82 84.1
Hma1.2p1_1439F.1_g283510 Hydrangea macrophylla HOM05D003220 ORTHO05D003944 6.2e-29 131.0 83 78.3
ECA246G3064 Erigeron canadensis HOM05D003220 ORTHO05D003944 6.9e-28 127.5 82 76.8
TAR371G0289 Trochodendron aralioides HOM05D003220 ORTHO05D003944 9.0e-28 127.1 79 78.5
HanXRQChr05g0155091 Helianthus annuus HOM05D003220 ORTHO05D003944 1.2e-27 126.7 82 78.0
TAR629G1627 Trochodendron aralioides HOM05D003220 ORTHO05D003944 1.2e-27 126.7 81 75.3
CSS0036065 Camellia sinensis var. sinensis HOM05D003220 ORTHO05D003944 2.6e-27 125.6 85 76.5
HanXRQChr08g0229301 Helianthus annuus HOM05D003220 ORTHO05D003944 3.4e-27 125.2 79 77.2
Nn4g26515 Nelumbo nucifera HOM05D003220 ORTHO05D003944 3.4e-27 125.2 81 79.0
TWI63G1463 Tripterygium wilfordii HOM05D003220 ORTHO05D003944 4.5e-27 124.8 84 73.8
Lsat_1_v5_gn_5_13561 Lactuca sativa HOM05D003220 ORTHO05D003944 5.8e-27 124.4 82 75.6
Manes.03G085300 Manihot esculenta HOM05D003220 ORTHO05D003944 7.6e-27 124.0 84 72.6
Lj2g0018966 Lotus japonicus HOM05D003220 ORTHO05D003944 1.3e-26 123.2 81 75.3
AUR62042443 Chenopodium quinoa HOM05D003220 ORTHO05D003944 1.7e-26 122.9 85 70.6
Lj9C477T17 Lonicera japonica HOM05D003220 ORTHO05D003944 1.7e-26 122.9 80 76.2
Medtr5g042880 Medicago truncatula HOM05D003220 ORTHO05D003944 1.7e-26 122.9 81 74.1
COL.COLO4_28080 Corchorus olitorius HOM05D003220 ORTHO05D003944 2.2e-26 122.5 82 72.0
Hund03392 Selenicereus undatus HOM05D003220 ORTHO05D003944 2.2e-26 122.5 80 75.0
Thecc.03G126500 Theobroma cacao HOM05D003220 ORTHO05D003944 2.2e-26 122.5 83 72.3
TWI38G0393 Tripterygium wilfordii HOM05D003220 ORTHO05D003944 2.9e-26 122.1 79 77.2
EL10Ac2g04001 Beta vulgaris HOM05D003220 ORTHO05D003944 3.8e-26 121.7 88 67.0
AUR62009263 Chenopodium quinoa HOM05D003220 ORTHO05D003944 3.8e-26 121.7 85 69.4
MELO3C002352.2 Cucumis melo HOM05D003220 ORTHO05D003944 3.8e-26 121.7 81 74.1
Lj4g0002027 Lotus japonicus HOM05D003220 ORTHO05D003944 3.8e-26 121.7 81 74.1
Oeu054655.1 Olea europaea HOM05D003220 ORTHO05D003944 3.8e-26 121.7 79 77.2
Duzib084G0962 Durio zibethinus HOM05D003220 ORTHO05D003944 5.0e-26 121.3 82 73.2
Prupe.5G153100 Prunus persica HOM05D003220 ORTHO05D003944 5.0e-26 121.3 81 75.3
GSVIVG01008510001 Vitis vinifera HOM05D003220 ORTHO05D003944 5.0e-26 121.3 83 74.7
DCAR_007481 Daucus carota HOM05D003220 ORTHO05D003944 6.5e-26 120.9 81 74.1
Medtr4g103680 Medicago truncatula HOM05D003220 ORTHO05D003944 6.5e-26 120.9 84 71.4
QL10p004159 Quercus lobata HOM05D003220 ORTHO05D003944 6.5e-26 120.9 84 73.8
QL10p004209 Quercus lobata HOM05D003220 ORTHO05D003944 6.5e-26 120.9 84 73.8
Ciclev10019860m.g Citrus clementina HOM05D003220 ORTHO05D003944 8.4e-26 120.6 81 72.8
FAN18G3924 Fragaria x ananassa HOM05D003220 ORTHO05D003944 8.4e-26 120.6 82 69.5
Sc10g0010420 Simmondsia chinensis HOM05D003220 ORTHO05D003944 8.4e-26 120.6 82 73.2
Duzib068G0624 Durio zibethinus HOM05D003220 ORTHO05D003944 1.1e-25 120.2 82 73.2
FvH4_5g30030 Fragaria vesca HOM05D003220 ORTHO05D003944 1.1e-25 120.2 82 69.5
SGA_v2.0_scaffold376G50300 Striga asiatica HOM05D003220 ORTHO05D001798 1.1e-25 120.2 84 70.2
Ah.03g136360 Amaranthus hybridus HOM05D003220 ORTHO05D003944 1.4e-25 119.8 88 65.9
MD14G1159300 Malus domestica HOM05D003220 ORTHO05D003944 1.4e-25 119.8 81 72.8
Prupe.7G058500 Prunus persica HOM05D003220 ORTHO05D003944 1.4e-25 119.8 81 74.1
MD06G1144100 Malus domestica HOM05D003220 ORTHO05D003944 1.9e-25 119.4 81 72.8
Sed0014346 Sechium edule HOM05D003220 ORTHO05D003944 1.9e-25 119.4 81 72.8
Ca_00914_v3 Cicer arietinum L. HOM05D003220 ORTHO05D003944 2.5e-25 119.0 81 70.4
Ca_29978_v3 Cicer arietinum L. HOM05D003220 ORTHO05D003944 2.5e-25 119.0 81 70.4
FAN08G0739 Fragaria x ananassa HOM05D003220 ORTHO05D003944 2.5e-25 119.0 79 72.2
MD06G1144000 Malus domestica HOM05D003220 ORTHO05D003944 2.5e-25 119.0 68 80.9
Sc10g0008710 Simmondsia chinensis HOM05D003220 ORTHO05D003944 2.5e-25 119.0 81 74.1
FAN08G0954 Fragaria x ananassa HOM05D003220 ORTHO05D003944 3.2e-25 118.6 82 70.7
Peaxi162Scf00175g00120 Petunia axillaris HOM05D003220 ORTHO05D003944 3.2e-25 118.6 82 72.0
ClCG03G003670 Citrullus lanatus HOM05D003220 ORTHO05D003944 4.2e-25 118.2 79 73.4
CsaV3_1G009560 Cucumis sativus L. HOM05D003220 ORTHO05D003944 4.2e-25 118.2 81 72.8
Duzib205G1890 Durio zibethinus HOM05D003220 ORTHO05D003944 4.2e-25 118.2 82 70.7
Gohir.A07G051900 Gossypium hirsutum HOM05D003220 ORTHO05D003944 4.2e-25 118.2 82 70.7
Gohir.D07G056400 Gossypium hirsutum HOM05D003220 ORTHO05D003944 4.2e-25 118.2 82 70.7
Potri.008G020200 Populus trichocarpa HOM05D003220 ORTHO05D003944 4.2e-25 118.2 82 72.0
Hund19502 Selenicereus undatus HOM05D003220 ORTHO05D003944 4.2e-25 118.2 85 68.2
Lalb_Chr07g0183341 Lupinus albus HOM05D003220 ORTHO05D003944 5.5e-25 117.9 81 71.6
Nitab4.5_0000231g0280 Nicotiana tabacum HOM05D003220 ORTHO05D003944 5.5e-25 117.9 83 71.1
Atru.chr9.1087 Acer truncatum HOM05D003220 ORTHO05D003944 7.2e-25 117.5 81 75.3
Cc00_g12840 Coffea canephora HOM05D003220 ORTHO05D003944 7.2e-25 117.5 80 72.5
PSO478G5055 Papaver somniferum HOM05D003220 ORTHO05D003944 7.2e-25 117.5 81 72.8
Psat4g065240 Pisum sativum HOM05D003220 ORTHO05D003944 7.2e-25 117.5 83 69.9
FAN04G2217 Fragaria x ananassa HOM05D003220 ORTHO05D003944 9.3e-25 117.1 82 69.5
FAN13G0994 Fragaria x ananassa HOM05D003220 ORTHO05D003944 9.3e-25 117.1 82 69.5
Phvul.003G209766 Phaseolus vulgaris HOM05D003220 ORTHO05D003944 9.3e-25 117.1 82 65.9
RcHm_v2.0_Chr7g0190471 Rosa chinensis HOM05D003220 ORTHO05D003944 9.3e-25 117.1 82 69.5
arahy.Tifrunner.gnm1.ann1.HUK63J Arachis hypogaea HOM05D003220 ORTHO05D003944 1.2e-24 116.7 81 72.8
arahy.Tifrunner.gnm1.ann1.VD0ABX Arachis hypogaea HOM05D003220 ORTHO05D003944 1.2e-24 116.7 81 72.8
CiPaw.11G009400 Carya illinoinensis HOM05D003220 ORTHO05D003944 1.2e-24 116.7 82 69.5
Gorai.001G059900 Gossypium raimondii HOM05D003220 ORTHO05D003944 1.2e-24 116.7 82 69.5
Lalb_Chr13g0297361 Lupinus albus HOM05D003220 ORTHO05D003944 1.2e-24 116.7 79 72.2
Potri.010G239000 Populus trichocarpa HOM05D003220 ORTHO05D003944 1.2e-24 116.7 82 70.7
Rhsim08G0188400 Rhododendron simsii HOM05D003220 ORTHO05D003944 1.2e-24 116.7 81 74.1
RcHm_v2.0_Chr7g0190481 Rosa chinensis HOM05D003220 ORTHO05D003944 1.2e-24 116.7 69 76.8
Sp7g22820 Schrenkiella parvula HOM05D003220 ORTHO05D003944 1.2e-24 116.7 82 68.3
TPR.G30011 Trifolium pratense HOM05D003220 ORTHO05D003944 1.2e-24 116.7 86 67.4
Migut.D00060 Erythranthe guttata HOM05D003220 ORTHO05D003944 2.1e-24 115.9 84 69.0
Nitab4.5_0001487g0130 Nicotiana tabacum HOM05D003220 ORTHO05D003944 2.1e-24 115.9 83 69.9
Glyma.17G128600 Glycine max HOM05D003220 ORTHO05D003944 2.7e-24 115.5 81 69.1
SGA_v2.0_scaffold334G49089 Striga asiatica HOM05D003220 ORTHO05D003944 2.7e-24 115.5 84 67.9
vmacro05131 Vaccinium macrocarpon HOM05D003220 ORTHO05D003944 2.7e-24 115.5 80 73.8
BcaC06g32854 Brassica carinata HOM05D003220 ORTHO05D003944 3.5e-24 115.2 82 69.5
CAN.G1528.7 Capsicum annuum HOM05D003220 ORTHO05D003944 3.5e-24 115.2 83 71.1
CiPaw.12G040800 Carya illinoinensis HOM05D003220 ORTHO05D003944 3.5e-24 115.2 78 74.4
Solyc05g012270.3 Solanum lycopersicum HOM05D003220 ORTHO05D003944 3.5e-24 115.2 83 69.9
Sopen05g007100 Solanum pennellii HOM05D003220 ORTHO05D003944 3.5e-24 115.2 83 69.9
PGSC0003DMG400028317 Solanum tuberosum HOM05D003220 ORTHO05D003944 3.5e-24 115.2 83 69.9
ATR1149G068 Amborella trichopoda HOM05D003220 ORTHO05D003944 6.1e-24 114.4 68 77.9
FvH4_5g07910 Fragaria vesca HOM05D003220 ORTHO05D003944 6.1e-24 114.4 68 75.0
FAN18G1033 Fragaria x ananassa HOM05D003220 ORTHO05D003944 6.1e-24 114.4 68 75.0
Glyma.05G046700 Glycine max HOM05D003220 ORTHO05D003944 6.1e-24 114.4 81 69.1
PSO782G5387 Papaver somniferum HOM05D003220 ORTHO05D003944 6.1e-24 114.4 82 70.7
A03p55590 Brassica napus HOM05D003220 ORTHO05D003944 1.0e-23 113.6 82 68.3
C07p53830 Brassica napus HOM05D003220 ORTHO05D003944 1.0e-23 113.6 82 68.3
BolC7t45873H Brassica oleracea HOM05D003220 ORTHO05D003944 1.0e-23 113.6 82 68.3
Cfa018844 Carpinus fangiana HOM05D003220 ORTHO05D003944 1.0e-23 113.6 82 65.9
CDE09G1413 Ceratophyllum demersum HOM05D003220 ORTHO05D003944 1.3e-23 113.2 80 71.2
Thhalv10025000m.g Eutrema salsugineum HOM05D003220 ORTHO05D003944 1.3e-23 113.2 82 64.6
unitig_750.g28437 Utricularia gibba HOM05D003220 ORTHO05D003944 1.3e-23 113.2 84 66.7
CANSAT64G0212 Cannabis sativa HOM05D003220 ORTHO05D003944 1.8e-23 112.8 81 69.1
Aqoxy6G02806 Aquilegia oxysepala HOM05D003220 ORTHO05D003944 2.3e-23 112.5 81 65.4
Aqoxy7G03930 Aquilegia oxysepala HOM05D003220 ORTHO05D003944 2.3e-23 112.5 81 65.4
BraA03t14626Z Brassica rapa HOM05D003220 ORTHO05D003944 2.3e-23 112.5 82 67.1
Haze_07237 Corylus avellana HOM05D003220 ORTHO05D003944 2.3e-23 112.5 82 65.9
PGR004G0659 Punica granatum HOM05D003220 ORTHO05D003944 2.3e-23 112.5 84 66.7
Glyma.05G236000 Glycine max HOM05D003220 ORTHO05D003944 3.0e-23 112.1 79 69.6
CSS0002367 Camellia sinensis var. sinensis HOM05D003220 ORTHO05D003944 3.9e-23 111.7 76 73.7
VMungo1215G0590 Vigna mungo HOM05D003220 ORTHO05D003944 3.9e-23 111.7 82 64.6
A01p16140 Brassica napus HOM05D003220 ORTHO05D003944 5.1e-23 111.3 82 65.9
C01p20130 Brassica napus HOM05D003220 ORTHO05D003944 5.1e-23 111.3 82 65.9
BolC1t01942H Brassica oleracea HOM05D003220 ORTHO05D003944 5.1e-23 111.3 82 65.9
BraA01t01550Z Brassica rapa HOM05D003220 ORTHO05D003944 5.1e-23 111.3 82 65.9
Migut.N00934 Erythranthe guttata HOM05D003220 ORTHO05D003944 5.1e-23 111.3 65 78.5
Phvul.003G209832 Phaseolus vulgaris HOM05D003220 ORTHO05D003944 5.1e-23 111.3 77 68.8
Rhsim02G0083400 Rhododendron simsii HOM05D003220 ORTHO05D003944 5.1e-23 111.3 81 71.6
CANSAT80G2734 Cannabis sativa HOM05D003220 ORTHO05D003944 6.7e-23 110.9 62 82.3
ECA247G3880 Erigeron canadensis HOM05D003220 ORTHO05D003944 6.7e-23 110.9 76 69.7
Lj1g0011038 Lotus japonicus HOM05D003220 ORTHO05D003944 6.7e-23 110.9 84 66.7
Aa31LG7G11010 Aethionema arabicum HOM05D003220 ORTHO05D003944 1.1e-22 110.2 82 67.1
Os12g0235800 Oryza sativa ssp. japonica HOM05D003220 ORTHO05D003944 1.1e-22 110.2 87 66.7
AT4G24830 Arabidopsis thaliana HOM05D003220 ORTHO05D003944 1.5e-22 109.8 82 67.1
MSTRG.18081 Avicennia marina HOM05D003220 ORTHO05D003944 1.5e-22 109.8 80 70.0
Carub.0007s1622 Capsella rubella HOM05D003220 ORTHO05D003944 1.5e-22 109.8 82 65.9
AL7G28350 Arabidopsis lyrata HOM05D003220 ORTHO05D003944 1.9e-22 109.4 82 65.9
BcaNung07239 Brassica carinata HOM05D003220 ORTHO05D003944 1.9e-22 109.4 68 72.1
BcaNung07242 Brassica carinata HOM05D003220 ORTHO05D003944 1.9e-22 109.4 68 72.1
SEGI_40301 Sequoiadendron giganteum HOM05D003220 ORTHO05D003944 1.9e-22 109.4 83 71.1
CARHR232250 Cardamine hirsuta HOM05D003220 ORTHO05D003944 2.5e-22 109.0 82 65.9
ECA247G1256 Erigeron canadensis HOM05D003220 ORTHO05D003944 2.5e-22 109.0 67 74.6
Medtr3g088970 Medicago truncatula HOM05D003220 ORTHO05D003944 2.5e-22 109.0 81 66.7
Lj1g0011796 Lotus japonicus HOM05D003220 ORTHO05D003944 3.3e-22 108.6 84 64.3
SEGI_19712 Sequoiadendron giganteum HOM05D003220 ORTHO05D003944 3.3e-22 108.6 83 68.7
MSTRG.21708 Avicennia marina HOM05D003220 ORTHO05D003944 4.3e-22 108.2 64 76.6
Lj1g0021098 Lotus japonicus HOM05D003220 ORTHO05D003944 4.3e-22 108.2 84 64.3
CsaV3_1G009540 Cucumis sativus L. HOM05D003220 ORTHO05D003944 7.4e-22 107.5 72 72.2
Eucgr.K02738 Eucalyptus grandis HOM05D003220 ORTHO05D003944 7.4e-22 107.5 84 69.0
Glyma.05G046900 Glycine max HOM05D003220 ORTHO05D003944 9.7e-22 107.1 67 76.1
SalBow2G0412 Salvia bowleyana HOM05D003220 ORTHO05D003944 1.3e-21 106.7 64 76.6
Psat5g139800 Pisum sativum HOM05D003220 ORTHO05D003944 1.6e-21 106.3 56 83.9
AagrBONN_evm.TU.Sc2ySwM_228.4817 Anthoceros agrestis HOM05D003220 ORTHO05D003944 2.2e-21 105.9 83 65.1
THA.LOC104825013 Tarenaya hassleriana HOM05D003220 ORTHO05D003944 6.3e-21 104.4 81 63.0
HPP92_001262 Vanilla planifolia HOM05D003220 ORTHO05D003944 6.3e-21 104.4 87 59.8
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 8.2e-21 104.0 56 83.9
SGA_v2.0_scaffold198G41113 Striga asiatica HOM05D003220 ORTHO05D003944 8.2e-21 104.0 65 69.2
CBR_g61477 Chara braunii HOM05D003220 ORTHO05D003944 1.1e-20 103.6 86 62.8
THA.LOC104811595 Tarenaya hassleriana HOM05D003220 ORTHO05D003944 1.1e-20 103.6 81 63.0
SMO356G0518 Selaginella moellendorffii HOM05D003220 ORTHO05D003944 2.4e-20 102.4 57 82.5
Sed0000451 Sechium edule HOM05D003220 ORTHO05D003944 4.1e-20 101.7 66 72.7
BcaC07g38139 Brassica carinata HOM05D003220 ORTHO05D003944 6.9e-20 100.9 56 76.8
BolC8t48565H Brassica oleracea HOM05D003220 ORTHO05D003944 6.9e-20 100.9 56 76.8
Lalb_Chr06g0172311 Lupinus albus HOM05D003220 ORTHO05D003944 6.9e-20 100.9 67 76.1
ClCG06G017780 Citrullus lanatus HOM05D003220 ORTHO05D003944 4.5e-19 98.2 66 69.7
CsaV3_1G000670 Cucumis sativus L. HOM05D003220 ORTHO05D003944 4.5e-19 98.2 66 68.2
Mapoly0038s0028 Marchantia polymorpha HOM05D003220 ORTHO05D003944 4.5e-19 98.2 84 61.9
Pp3c1_33150 Physcomitrium patens HOM05D003220 ORTHO05D003944 5.9e-19 97.8 82 62.2
Sed0017817 Sechium edule HOM05D003220 ORTHO05D003944 2.2e-18 95.9 52 82.7
A08p21550 Brassica napus HOM05D003220 ORTHO05D003944 3.8e-18 95.1 56 75.0
Zm00001eb411740 Zea mays HOM05D003220 ORTHO05D003944 1.1e-17 93.6 81 59.3
FvH4_5g06920 Fragaria vesca HOM05D003220 ORTHO05D003944 1.4e-17 93.2 56 76.8
FvH4_5g06980 Fragaria vesca HOM05D003220 ORTHO05D003944 4.2e-17 91.7 56 75.0
ClCG03G003660 Citrullus lanatus HOM05D003220 ORTHO05D003944 2.1e-16 89.4 72 62.5
SMO356G0112 Selaginella moellendorffii HOM05D003220 ORTHO05D003944 2.1e-16 89.4 53 81.1
Pp3c12_4480 Physcomitrium patens HOM05D003220 ORTHO05D003944 6.7e-15 84.3 106 49.1
MBI08_g11776_MAGBIO Magnolia biondii HOM05D003220 ORTHO05D003944 5.3e-12 74.7 193 31.6
Cre09.g416050 Chlamydomonas reinhardtii HOM05D003220 ORTHO05D003944 1.0e-10 70.5 78 46.2
PRCOL_00001450 Prasinoderma coloniale HOM05D003220 ORTHO05D003944 5.0e-10 68.2 48 64.6
Sabra08G0013500 Salix brachista HOM05D003220 ORTHO05D003944 5.0e-10 68.2 49 75.5
Sabra10G0187200 Salix brachista HOM05D003220 ORTHO05D003944 1.6e-08 63.2 55 61.8
Psat2g150200 Pisum sativum HOM05D003220 ORTHO05D003944 5.1e-07 58.2 28 82.1
TPR.G26144 Trifolium pratense HOM05D003220 ORTHO05D003944 1.1e-06 57.0 30 76.7
TPR.G20454 Trifolium pratense HOM05D003220 ORTHO05D003944 2.6e-06 55.8 37 73.0
Cfa022737 Carpinus fangiana HOM05D003220 ORTHO05D003944 7.4e-06 54.3 47 61.7


User provided reference genes

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