Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04672 Davidia involucrata HOM05D000181 ORTHO05D005757 6.9e-63 243.8 124 100.0
DCAR_007391 Daucus carota HOM05D000181 ORTHO05D005757 1.4e-10 70.1 48 79.2
Ah.08g220730 Amaranthus hybridus HOM05D000181 ORTHO05D005757 1.8e-10 69.7 57 70.2
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 1.8e-10 69.7 44 86.4
Gohir.A05G089900 Gossypium hirsutum HOM05D000181 ORTHO05D005757 1.8e-10 69.7 86 53.5
EL10Ac7g16127 Beta vulgaris HOM05D000181 ORTHO05D005757 2.3e-10 69.3 57 70.2
AUR62001684 Chenopodium quinoa HOM05D000181 ORTHO05D005757 2.3e-10 69.3 49 75.5
ECA236G3476 Erigeron canadensis HOM05D000181 ORTHO05D005757 2.3e-10 69.3 44 84.1
TWI31G1099 Tripterygium wilfordii HOM05D000181 ORTHO05D005757 2.3e-10 69.3 44 84.1
Gohir.D05G090800 Gossypium hirsutum HOM05D000181 ORTHO05D005757 3.0e-10 68.9 47 78.7
Gorai.009G093300 Gossypium raimondii HOM05D000181 ORTHO05D005757 3.0e-10 68.9 47 78.7
Lj2A1078G39 Lonicera japonica HOM05D000181 ORTHO05D005757 3.0e-10 68.9 44 84.1
THA.LOC104810725 Tarenaya hassleriana HOM05D000181 ORTHO05D005757 3.0e-10 68.9 47 78.7
CSS0008554 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D005757 4.0e-10 68.6 44 84.1
CSS0046009 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D005757 4.0e-10 68.6 44 84.1
COL.COLO4_19109 Corchorus olitorius HOM05D000181 ORTHO05D005757 4.0e-10 68.6 47 78.7
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 4.0e-10 68.6 115 44.3
Glyma.14G192100 Glycine max HOM05D000181 ORTHO05D005757 4.0e-10 68.6 88 47.7
Thecc.09G305500 Theobroma cacao HOM05D000181 ORTHO05D005757 4.0e-10 68.6 47 76.6
Ah.04g150050 Amaranthus hybridus HOM05D000181 ORTHO05D005757 5.2e-10 68.2 57 68.4
CDE04G0235 Ceratophyllum demersum HOM05D000181 ORTHO05D005757 5.2e-10 68.2 44 84.1
Eucgr.B02274 Eucalyptus grandis HOM05D000181 ORTHO05D005757 5.2e-10 68.2 44 81.8
Gohir.A03G049400 Gossypium hirsutum HOM05D000181 ORTHO05D005757 5.2e-10 68.2 47 74.5
Gohir.D03G117900 Gossypium hirsutum HOM05D000181 ORTHO05D005757 5.2e-10 68.2 47 74.5
Gorai.003G124400 Gossypium raimondii HOM05D000181 ORTHO05D005757 5.2e-10 68.2 47 74.5
Aqoxy4G02662 Aquilegia oxysepala HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
arahy.Tifrunner.gnm1.ann1.70SKLQ Arachis hypogaea HOM05D000181 ORTHO05D005757 6.8e-10 67.8 48 75.0
arahy.Tifrunner.gnm1.ann1.ND684V Arachis hypogaea HOM05D000181 ORTHO05D005757 6.8e-10 67.8 48 75.0
ClCG03G000890 Citrullus lanatus HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 6.8e-10 67.8 44 81.8
CsaV3_1G036040 Cucumis sativus L. HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
LjContig00155g0009316 Lotus japonicus HOM05D000181 ORTHO05D005757 6.8e-10 67.8 45 75.6
MD03G1074100 Malus domestica HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
MD11G1080400 Malus domestica HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
Phvul.008G262300 Phaseolus vulgaris HOM05D000181 ORTHO05D005757 6.8e-10 67.8 47 74.5
Prupe.6G060800 Prunus persica HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
Sed0008141 Sechium edule HOM05D000181 ORTHO05D005757 6.8e-10 67.8 44 81.8
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 6.8e-10 67.8 58 67.2
Cpa.g.sc112.54 Carica papaya HOM05D000181 ORTHO05D005757 8.8e-10 67.4 47 76.6
Migut.N00882 Erythranthe guttata HOM05D000181 ORTHO05D005757 8.8e-10 67.4 44 79.5
CiPaw.13G080800 Carya illinoinensis HOM05D000181 ORTHO05D005757 1.2e-09 67.0 47 72.3
MBI05_g03462_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D005757 1.2e-09 67.0 47 76.6
Potri.009G043100 Populus trichocarpa HOM05D000181 ORTHO05D005757 1.2e-09 67.0 47 74.5
Sabra09G0030500 Salix brachista HOM05D000181 ORTHO05D005757 1.2e-09 67.0 47 74.5
CANSAT54G2135 Cannabis sativa HOM05D000181 ORTHO05D005757 1.5e-09 66.6 44 79.5
Glyma.02G225300 Glycine max HOM05D000181 ORTHO05D005757 1.5e-09 66.6 95 47.4
Nn2g11391 Nelumbo nucifera HOM05D000181 ORTHO05D005757 1.5e-09 66.6 44 81.8
Potri.001G249100 Populus trichocarpa HOM05D000181 ORTHO05D005757 1.5e-09 66.6 47 72.3
ATR0618G289 Amborella trichopoda HOM05D000181 ORTHO05D005757 2.0e-09 66.2 47 74.5
AL3G40320 Arabidopsis lyrata HOM05D000181 ORTHO05D005757 2.0e-09 66.2 47 74.5
AL8G35200 Arabidopsis lyrata HOM05D000181 ORTHO05D005757 2.0e-09 66.2 47 74.5
CARHR272800 Cardamine hirsuta HOM05D000181 ORTHO05D005757 2.0e-09 66.2 47 74.5
Cfa011653 Carpinus fangiana HOM05D000181 ORTHO05D005757 2.0e-09 66.2 47 72.3
Haze_24257 Corylus avellana HOM05D000181 ORTHO05D005757 2.0e-09 66.2 47 72.3
FvH4_3g38190 Fragaria vesca HOM05D000181 ORTHO05D005757 2.0e-09 66.2 112 45.5
FAN11G0623 Fragaria x ananassa HOM05D000181 ORTHO05D005757 2.0e-09 66.2 112 45.5
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 2.0e-09 66.2 56 67.9
Lalb_Chr10g0103271 Lupinus albus HOM05D000181 ORTHO05D005757 2.0e-09 66.2 44 79.5
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 2.0e-09 66.2 90 51.1
Carub.0005s1330 Capsella rubella HOM05D000181 ORTHO05D005757 2.6e-09 65.9 47 74.5
Carub.0008s1951 Capsella rubella HOM05D000181 ORTHO05D005757 2.6e-09 65.9 47 72.3
QL01p026829 Quercus lobata HOM05D000181 ORTHO05D005757 2.6e-09 65.9 44 77.3
Sc12g0000870 Simmondsia chinensis HOM05D000181 ORTHO05D005757 2.6e-09 65.9 44 77.3
SGA_v2.0_scaffold39G15251 Striga asiatica HOM05D000181 ORTHO05D005757 2.6e-09 65.9 44 75.0
AT5G58870 Arabidopsis thaliana HOM05D000181 ORTHO05D005757 3.4e-09 65.5 58 63.8
MSTRG.12663 Avicennia marina HOM05D000181 ORTHO05D005757 3.4e-09 65.5 44 77.3
Ciclev10027831m.g Citrus clementina HOM05D000181 ORTHO05D005757 3.4e-09 65.5 47 76.6
Cc01_g13940 Coffea canephora HOM05D000181 ORTHO05D005757 3.4e-09 65.5 44 77.3
Sabra16G0151200 Salix brachista HOM05D000181 ORTHO05D005757 3.4e-09 65.5 47 72.3
Sp5g14670 Schrenkiella parvula HOM05D000181 ORTHO05D005757 3.4e-09 65.5 47 74.5
Aa31LG1G18900 Aethionema arabicum HOM05D000181 ORTHO05D005757 4.4e-09 65.1 47 74.5
AL5G26300 Arabidopsis lyrata HOM05D000181 ORTHO05D005757 4.4e-09 65.1 47 72.3
Duzib150G0876 Durio zibethinus HOM05D000181 ORTHO05D005757 5.7e-09 64.7 47 72.3
FAN25G0837 Fragaria x ananassa HOM05D000181 ORTHO05D005757 5.7e-09 64.7 92 50.0
HanXRQChr06g0179431 Helianthus annuus HOM05D000181 ORTHO05D005757 5.7e-09 64.7 42 83.3
Manes.01G164300 Manihot esculenta HOM05D000181 ORTHO05D005757 5.7e-09 64.7 47 72.3
Manes.02G121800 Manihot esculenta HOM05D000181 ORTHO05D005757 5.7e-09 64.7 47 72.3
Atru.chr3.4273 Acer truncatum HOM05D000181 ORTHO05D005757 7.5e-09 64.3 45 77.8
Thhalv10010128m.g Eutrema salsugineum HOM05D000181 ORTHO05D005757 7.5e-09 64.3 56 60.7
SalBow2G0286 Salvia bowleyana HOM05D000181 ORTHO05D005757 7.5e-09 64.3 44 75.0
VMungo0647G2397 Vigna mungo HOM05D000181 ORTHO05D005757 7.5e-09 64.3 47 70.2
Sp6g20570 Schrenkiella parvula HOM05D000181 ORTHO05D005757 9.8e-09 63.9 45 73.3
AT3G47060 Arabidopsis thaliana HOM05D000181 ORTHO05D005757 1.3e-08 63.5 47 72.3
Dinv14464 Davidia involucrata HOM05D000181 ORTHO05D005757 1.3e-08 63.5 79 54.4
Oeu049273.1 Olea europaea HOM05D000181 ORTHO05D005757 1.3e-08 63.5 45 73.3
A10p15460 Brassica napus HOM05D000181 ORTHO05D005757 1.7e-08 63.2 45 71.1
BraA10t43689Z Brassica rapa HOM05D000181 ORTHO05D005757 1.7e-08 63.2 45 71.1
CAN.G483.1 Capsicum annuum HOM05D000181 ORTHO05D005757 1.7e-08 63.2 55 63.6
Lalb_Chr04g0252331 Lupinus albus HOM05D000181 ORTHO05D005757 1.7e-08 63.2 44 72.7
unitig_8.g3694 Utricularia gibba HOM05D000181 ORTHO05D005757 1.7e-08 63.2 45 68.9
BcaC04g19854 Brassica carinata HOM05D000181 ORTHO05D005757 2.2e-08 62.8 44 72.7
BolC9t57960H Brassica oleracea HOM05D000181 ORTHO05D005757 2.2e-08 62.8 45 68.9
Oeu009382.1 Olea europaea HOM05D000181 ORTHO05D005757 2.2e-08 62.8 45 71.1
PSO339G2545 Papaver somniferum HOM05D000181 ORTHO05D005757 2.2e-08 62.8 47 74.5
PSO384G0122 Papaver somniferum HOM05D000181 ORTHO05D005757 2.2e-08 62.8 47 74.5
HanXRQChr05g0135651 Helianthus annuus HOM05D000181 ORTHO05D005757 2.8e-08 62.4 75 49.3
TAR633G0153 Trochodendron aralioides HOM05D000181 ORTHO05D005757 2.8e-08 62.4 42 83.3
CARHR155660 Cardamine hirsuta HOM05D000181 ORTHO05D005757 3.7e-08 62.0 47 70.2
Nitab4.5_0000102g0170 Nicotiana tabacum HOM05D000181 ORTHO05D005757 3.7e-08 62.0 47 70.2
Glyma.18G065600 Glycine max HOM05D000181 ORTHO05D005757 4.9e-08 61.6 44 65.9
Nitab4.5_0001970g0080 Nicotiana tabacum HOM05D000181 ORTHO05D005757 4.9e-08 61.6 47 70.2
Solyc06g005950.3 Solanum lycopersicum HOM05D000181 ORTHO05D005757 4.9e-08 61.6 115 40.0
C09p51030 Brassica napus HOM05D000181 ORTHO05D005757 6.3e-08 61.2 45 68.9
Nn2g13621 Nelumbo nucifera HOM05D000181 ORTHO05D005757 6.3e-08 61.2 43 74.4
Peaxi162Scf00216g00037 Petunia axillaris HOM05D000181 ORTHO05D005757 6.3e-08 61.2 85 45.9
Sopen06g001920 Solanum pennellii HOM05D000181 ORTHO05D005757 1.1e-07 60.5 115 39.1
PGSC0003DMG400004149 Solanum tuberosum HOM05D000181 ORTHO05D005757 1.1e-07 60.5 115 39.1
DCAR_005895 Daucus carota HOM05D000181 ORTHO05D005757 1.4e-07 60.1 48 66.7
VMungo0540G0029 Vigna mungo HOM05D000002 ORTHO05D005757 1.4e-07 60.1 54 61.1
Ca_14910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D005757 1.8e-07 59.7 42 76.2
Phvul.006G065400 Phaseolus vulgaris HOM05D000181 ORTHO05D005757 1.8e-07 59.7 44 70.5
RcHm_v2.0_Chr5g0068621 Rosa chinensis HOM05D000181 ORTHO05D005757 1.8e-07 59.7 126 43.7
Ca_05586_v3 Cicer arietinum L. HOM05D000181 ORTHO05D005757 3.1e-07 58.9 88 44.3
BcaC01g01859 Brassica carinata HOM05D000181 ORTHO05D005757 4.1e-07 58.5 47 70.2
A06p20470 Brassica napus HOM05D000181 ORTHO05D005757 4.1e-07 58.5 47 70.2
C03p71290 Brassica napus HOM05D000181 ORTHO05D005757 4.1e-07 58.5 47 70.2
BraA06t25122Z Brassica rapa HOM05D000181 ORTHO05D005757 4.1e-07 58.5 47 70.2
ATR0723G008 Amborella trichopoda HOM05D000181 ORTHO05D005757 9.2e-07 57.4 46 69.6
THA.LOC104814906 Tarenaya hassleriana HOM05D000181 ORTHO05D005757 9.2e-07 57.4 53 64.2
BolC3t19414H Brassica oleracea HOM05D000181 ORTHO05D005757 1.2e-06 57.0 47 68.1
Medtr3g462930 Medicago truncatula HOM05D000181 ORTHO05D005757 1.2e-06 57.0 44 59.1
Rhsim13G0072100 Rhododendron simsii HOM05D000181 ORTHO05D005757 3.5e-06 55.5 44 61.4
vmacro02988 Vaccinium macrocarpon HOM05D000181 ORTHO05D005757 3.5e-06 55.5 48 58.3
CiPaw.14G061100 Carya illinoinensis HOM05D000181 ORTHO05D005757 4.5e-06 55.1 40 77.5


User provided reference genes

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