Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04557 Davidia involucrata HOM05D001205 ORTHO05D184019 4.0e-66 254.6 127 100.0
Dinv42298 Davidia involucrata HOM05D001205 ORTHO05D001087 1.7e-08 63.2 48 75.0
CSS0023998 Camellia sinensis var. sinensis HOM05D001205 ORTHO05D001087 8.5e-08 60.8 42 76.2
SalBow6G3897 Salvia bowleyana HOM05D001205 ORTHO05D001087 2.5e-07 59.3 48 70.8
Dinv30392 Davidia involucrata HOM05D001205 ORTHO05D001087 4.2e-07 58.5 48 68.8
Oeu037597.1 Olea europaea HOM05D001205 ORTHO05D001087 4.2e-07 58.5 48 68.8
CsaV3_2G017890 Cucumis sativus L. HOM05D001205 ORTHO05D001087 1.2e-06 57.0 40 75.0
Migut.J00592 Erythranthe guttata HOM05D001205 ORTHO05D001087 1.2e-06 57.0 48 66.7
Sed0005975 Sechium edule HOM05D001205 ORTHO05D001087 1.2e-06 57.0 48 68.8
MSTRG.19528 Avicennia marina HOM05D001205 ORTHO05D001087 1.6e-06 56.6 48 66.7
CSS0009950 Camellia sinensis var. sinensis HOM05D001205 ORTHO05D001087 1.6e-06 56.6 40 75.0
CSS0026852 Camellia sinensis var. sinensis HOM05D001205 ORTHO05D001087 1.6e-06 56.6 40 75.0
CSS0044826 Camellia sinensis var. sinensis HOM05D001205 ORTHO05D001087 1.6e-06 56.6 40 75.0
CiPaw.03G218100 Carya illinoinensis HOM05D001205 ORTHO05D001087 1.6e-06 56.6 48 66.7
MELO3C003551.2 Cucumis melo HOM05D001205 ORTHO05D001087 1.6e-06 56.6 48 66.7
Lj5A47T39 Lonicera japonica HOM05D001205 ORTHO05D001087 2.1e-06 56.2 40 72.5
TAR383G0004 Trochodendron aralioides HOM05D001205 ORTHO05D001087 2.1e-06 56.2 48 64.6
Aqoxy2G02475 Aquilegia oxysepala HOM05D001205 ORTHO05D001087 2.7e-06 55.8 42 69.0
Dinv36749 Davidia involucrata HOM05D001205 ORTHO05D001087 2.7e-06 55.8 48 64.6
Eucgr.C00914 Eucalyptus grandis HOM05D001205 ORTHO05D001087 2.7e-06 55.8 48 64.6
Glyma.16G027700 Glycine max HOM05D001205 ORTHO05D001087 3.6e-06 55.5 40 75.0
Phvul.001G170600 Phaseolus vulgaris HOM05D001205 ORTHO05D001087 3.6e-06 55.5 40 75.0
Phvul.010G110600 Phaseolus vulgaris HOM05D001205 ORTHO05D001087 3.6e-06 55.5 40 75.0
SGA_v2.0_scaffold62G21593 Striga asiatica HOM05D001205 ORTHO05D001087 3.6e-06 55.5 40 72.5
AL8G32600 Arabidopsis lyrata HOM05D001205 ORTHO05D001087 4.7e-06 55.1 48 66.7
AT5G56760 Arabidopsis thaliana HOM05D001205 ORTHO05D001087 4.7e-06 55.1 48 66.7
CARHR270510 Cardamine hirsuta HOM05D001205 ORTHO05D001087 4.7e-06 55.1 48 66.7
PSO832G2046 Papaver somniferum HOM05D001205 ORTHO05D001087 4.7e-06 55.1 40 72.5
PGR142G2479 Punica granatum HOM05D001205 ORTHO05D001087 4.7e-06 55.1 48 62.5
Sed0002951 Sechium edule HOM05D001205 ORTHO05D001087 4.7e-06 55.1 48 66.7
ClCG02G000850 Citrullus lanatus HOM05D000067 ORTHO05D000280 6.1e-06 54.7 48 64.6
Hma1.2p1_0663F.1_g198760 Hydrangea macrophylla HOM05D001205 ORTHO05D001087 6.1e-06 54.7 40 75.0
Hma1.2p1_0800F.1_g219950 Hydrangea macrophylla HOM05D001205 ORTHO05D001087 6.1e-06 54.7 40 75.0
PSO063G2203 Papaver somniferum HOM05D001205 ORTHO05D001087 6.1e-06 54.7 40 72.5
PSO170G5797 Papaver somniferum HOM05D001205 ORTHO05D001087 6.1e-06 54.7 40 72.5
DCAR_032248 Daucus carota HOM05D001205 ORTHO05D001087 7.9e-06 54.3 40 67.5
Lalb_Chr17g0342301 Lupinus albus HOM05D001205 ORTHO05D001087 7.9e-06 54.3 40 70.0
QL02p063027 Quercus lobata HOM05D001205 ORTHO05D001087 7.9e-06 54.3 40 70.0
Hund10417 Selenicereus undatus HOM05D001205 ORTHO05D001087 7.9e-06 54.3 48 64.6


User provided reference genes

Program Settings