Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 1.7e-70 269.2 137 100.0
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 3.5e-68 261.5 137 96.4
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.6e-63 245.4 137 89.1
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 5.8e-63 244.2 137 89.1
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 5.8e-63 244.2 136 89.7
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 5.8e-63 244.2 134 91.0
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 7.6e-63 243.8 137 88.3
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 9.9e-63 243.4 137 88.3
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.7e-62 242.7 137 88.3
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 2.2e-62 242.3 134 90.3
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.9e-62 241.9 137 89.1
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 8.4e-62 240.4 137 86.1
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.4e-61 239.6 137 86.1
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.4e-61 239.6 137 86.1
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.4e-61 239.6 137 86.1
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.2e-61 238.4 137 88.3
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 3.2e-61 238.4 137 85.4
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.5e-61 237.7 137 84.7
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.5e-61 237.7 137 84.7
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.5e-61 237.7 137 84.7
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 5.5e-61 237.7 137 84.7
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 1.2e-60 236.5 135 85.9
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.6e-60 236.1 137 86.1
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.6e-60 236.1 138 87.0
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.6e-60 236.1 132 88.6
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 2.1e-60 235.7 136 85.3
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 2.1e-60 235.7 136 85.3
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 2.1e-60 235.7 136 85.3
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 2.7e-60 235.3 142 86.6
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 7.9e-60 233.8 144 84.0
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 83.9
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 1.3e-59 233.0 132 87.9
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 1.8e-59 232.6 133 85.7
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.8e-59 232.6 129 88.4
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 1.8e-59 232.6 138 84.8
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 2.3e-59 232.3 137 82.5
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.9e-59 231.5 145 83.4
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 83.2
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 83.9
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 6.7e-59 230.7 136 85.3
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 8.7e-59 230.3 137 85.4
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.1e-58 229.9 136 83.1
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 1.5e-58 229.6 137 82.5
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 1.9e-58 229.2 137 81.8
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.5e-58 228.8 137 82.5
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 2.5e-58 228.8 137 83.2
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 4.3e-58 228.0 137 81.8
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 5.6e-58 227.6 148 79.7
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 9.6e-58 226.9 131 84.7
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 1.6e-57 226.1 137 83.2
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 3.7e-57 224.9 140 79.3
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 4.8e-57 224.6 137 81.8
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 4.8e-57 224.6 137 82.5
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 4.8e-57 224.6 136 82.4
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 6.2e-57 224.2 131 83.2
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 8.2e-57 223.8 137 81.8
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 8.2e-57 223.8 137 81.8
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 8.2e-57 223.8 137 81.8
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 1.1e-56 223.4 137 81.0
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.1e-56 223.4 164 72.6
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 1.4e-56 223.0 137 79.6
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 2.4e-56 222.2 137 80.3
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 2.4e-56 222.2 137 80.3
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 2.4e-56 222.2 137 80.3
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 3.1e-56 221.9 137 80.3
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 3.1e-56 221.9 137 80.3
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 3.1e-56 221.9 137 80.3
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 6.9e-56 220.7 136 81.6
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 6.9e-56 220.7 137 79.6
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 6.9e-56 220.7 137 80.3
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 9.0e-56 220.3 137 80.3
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 1.2e-55 219.9 137 76.6
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.0e-55 219.2 169 72.2
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 3.4e-55 218.4 137 76.6
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 5.8e-55 217.6 140 75.7
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 7.6e-55 217.2 137 78.1
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 7.6e-55 217.2 137 80.3
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 2.2e-54 215.7 123 87.0
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 2.9e-54 215.3 138 77.5
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 4.9e-54 214.5 137 77.4
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 4.9e-54 214.5 140 75.7
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 4.9e-54 214.5 123 86.2
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.1e-53 213.4 137 77.4
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.1e-53 213.4 132 79.5
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.1e-53 213.4 133 79.7
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 1.4e-53 213.0 136 83.1
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 4.2e-53 211.5 129 82.2
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 5.5e-53 211.1 131 84.0
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 7.1e-53 210.7 133 77.4
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 1.6e-52 209.5 128 82.0
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 3.5e-52 208.4 144 73.6
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 3.5e-52 208.4 126 84.1
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 3.5e-52 208.4 127 80.3
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 6.0e-52 207.6 123 83.7
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 3.0e-51 205.3 133 76.7
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 3.0e-51 205.3 131 77.1
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 8.7e-51 203.8 125 81.6
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 8.7e-51 203.8 125 81.6
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 1.9e-50 202.6 131 75.6
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 7.4e-50 200.7 137 75.2
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 8.2e-49 197.2 128 72.7
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.1e-48 196.8 110 90.0
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 1.1e-48 196.8 132 70.5
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.5e-47 193.0 110 87.3
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 1.5e-47 193.0 110 90.0
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.0e-47 192.6 115 85.2
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 1.7e-46 189.5 130 69.2
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 6.5e-46 187.6 106 89.6
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.1e-45 186.8 110 84.5
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.7e-44 182.2 109 83.5
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 4.6e-44 181.4 104 86.5
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-43 179.5 126 73.0
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.1e-42 176.8 109 85.3
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 1.5e-42 176.4 145 66.2
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 7.4e-42 174.1 113 78.8
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.7e-41 171.8 131 69.5
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.0e-38 163.7 107 72.9
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 8.5e-38 160.6 118 71.2
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 1.1e-37 160.2 115 67.8
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 1.2e-36 156.8 133 63.9
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 4.7e-36 154.8 140 62.9
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 3.9e-35 151.8 112 69.6
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 3.3e-34 148.7 181 50.3
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 3.7e-33 145.2 84 88.1
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.1e-32 143.7 85 84.7
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 7.0e-32 141.0 84 86.9
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 4.5e-31 138.3 84 85.7
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 2.9e-30 135.6 133 60.2
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 5.5e-29 131.3 86 79.1
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 1.6e-28 129.8 84 82.1
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.7e-28 129.0 74 86.5
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 5.2e-27 124.8 104 57.7
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 5.2e-27 124.8 98 66.3
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 3.3e-26 122.1 120 57.5
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 8.2e-25 117.5 114 51.8
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 3.1e-24 115.5 73 80.8
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 6.5e-22 107.8 93 60.2
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-21 106.3 65 78.5
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.2e-20 103.6 60 81.7
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 6.8e-19 97.8 53 83.0
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 1.5e-18 96.7 122 39.3
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 3.7e-17 92.0 60 81.7
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 3.7e-17 92.0 62 75.8
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 4.8e-17 91.7 61 77.0
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 8.3e-17 90.9 52 76.9
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.1e-16 90.5 61 75.4
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.7e-14 83.2 77 57.1
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 2.9e-14 82.4 45 82.2
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 3.8e-14 82.0 124 39.5
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 6.5e-14 81.3 157 39.5
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 3.1e-08 62.4 120 35.0
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 2.7e-07 59.3 55 58.2
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 7.7e-07 57.8 41 70.7


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