Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 6.1e-64 247.3 121 100.0
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.8e-16 89.0 63 73.0
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.1e-15 87.0 48 91.7
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.8e-15 86.3 46 93.5
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.8e-15 86.3 60 73.3
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 1.2e-14 83.6 63 74.6
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.2e-14 83.6 73 63.0
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 3.4e-14 82.0 67 68.7
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 4.4e-14 81.6 92 55.4
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 4.4e-14 81.6 92 54.3
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 5.8e-14 81.3 92 54.3
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 7.5e-14 80.9 66 69.7
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 9.8e-14 80.5 92 54.3
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 9.8e-14 80.5 66 68.2
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 9.8e-14 80.5 67 68.7
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 9.8e-14 80.5 94 54.3
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.3e-13 80.1 93 54.8
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.3e-13 80.1 93 53.8
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.3e-13 80.1 50 88.0
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.7e-13 79.7 93 52.7
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 2.2e-13 79.3 92 53.3
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.2e-13 79.3 66 68.2
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.9e-13 79.0 66 65.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 2.9e-13 79.0 67 67.2
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 3.7e-13 78.6 48 87.5
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 3.7e-13 78.6 49 81.6
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 3.7e-13 78.6 41 97.6
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 4.9e-13 78.2 41 95.1
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 4.9e-13 78.2 68 66.2
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 4.9e-13 78.2 41 95.1
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 6.4e-13 77.8 50 80.0
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 6.4e-13 77.8 41 95.1
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 6.4e-13 77.8 41 95.1
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 6.4e-13 77.8 66 65.2
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 6.4e-13 77.8 50 84.0
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 6.4e-13 77.8 51 82.4
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 8.3e-13 77.4 48 83.3
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 8.3e-13 77.4 48 83.3
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 8.3e-13 77.4 40 100.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 8.3e-13 77.4 66 65.2
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 8.3e-13 77.4 41 97.6
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 8.3e-13 77.4 93 52.7
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 8.3e-13 77.4 41 97.6
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 8.3e-13 77.4 42 92.9
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 8.3e-13 77.4 42 92.9
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 8.3e-13 77.4 66 65.2
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.1e-12 77.0 40 97.5
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.1e-12 77.0 40 97.5
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.1e-12 77.0 66 65.2
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 1.1e-12 77.0 66 65.2
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.1e-12 77.0 41 95.1
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.4e-12 76.6 41 92.7
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.4e-12 76.6 67 65.7
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.4e-12 76.6 41 92.7
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-12 76.6 41 92.7
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-12 76.6 41 92.7
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-12 76.6 41 92.7
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-12 76.6 41 92.7
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.4e-12 76.6 67 62.7
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.9e-12 76.3 63 68.3
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 92.7
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 92.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 95.1
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.9e-12 76.3 41 92.7
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 3.2e-12 75.5 41 90.2
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.2e-12 75.5 41 92.7
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.2e-12 75.5 41 90.2
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 3.2e-12 75.5 40 95.0
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 4.1e-12 75.1 66 63.6
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 4.1e-12 75.1 66 63.6
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 5.4e-12 74.7 41 90.2
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 5.4e-12 74.7 41 90.2
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 9.2e-12 73.9 50 78.0
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.2e-11 73.6 41 90.2
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.2e-11 73.6 50 72.0
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.6e-11 73.2 66 59.1
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 1.6e-11 73.2 41 85.4
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.6e-11 73.2 44 81.8
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 2.1e-11 72.8 79 57.0
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.1e-11 72.8 66 62.1
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.1e-11 72.8 66 62.1
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 2.7e-11 72.4 51 68.6
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 3.5e-11 72.0 79 54.4
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 3.5e-11 72.0 66 59.1
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 6.0e-11 71.2 41 87.8
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 6.0e-11 71.2 66 56.1
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 7.8e-11 70.9 41 80.5
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 7.8e-11 70.9 47 78.7
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.0e-10 70.5 66 56.1
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.9e-10 68.6 59 59.3
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 8.6e-10 67.4 49 63.3
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 8.6e-10 67.4 49 63.3
Dinv41242 Davidia involucrata HOM05D002728 ORTHO05D002874 8.1e-08 60.8 38 81.6
Dinv04500 Davidia involucrata HOM05D001080 ORTHO05D014453 6.8e-07 57.8 59 52.5
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 6.8e-07 57.8 30 93.3
Dinv42718 Davidia involucrata HOM05D002728 ORTHO05D002874 1.2e-06 57.0 39 76.9
Dinv43383 Davidia involucrata HOM05D002728 ORTHO05D002874 1.5e-06 56.6 38 76.3
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-06 55.8 40 62.5


User provided reference genes

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