Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 0.0e+00 1213.4 625 100.0
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.3e-234 816.6 631 68.1
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 7.1e-233 810.8 607 68.4
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 4.5e-227 791.6 611 68.7
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.7e-226 789.6 626 67.3
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.4e-220 770.0 626 64.5
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.2e-218 762.7 663 62.3
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.3e-215 753.4 618 62.5
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 2.5e-214 749.2 603 65.8
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.8e-212 743.0 607 64.6
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 5.3e-212 741.5 603 64.7
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.0e-210 737.3 675 59.9
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.1e-209 733.8 611 61.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.3e-207 726.1 614 60.9
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 3.9e-207 725.3 612 61.4
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 1.7e-202 709.9 611 59.9
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.5e-201 706.1 604 61.3
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 6.1e-200 701.4 602 59.8
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 8.8e-199 697.6 614 58.6
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.1e-198 697.2 616 61.5
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 3.7e-197 692.2 600 60.2
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 4.8e-197 691.8 584 61.8
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.4e-196 690.3 600 60.0
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 1.2e-195 687.2 600 58.7
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 3.5e-195 685.6 601 60.2
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.0e-194 684.1 621 58.1
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 8.5e-194 681.0 625 57.9
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 8.0e-192 674.5 624 57.5
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 3.0e-191 672.5 598 58.9
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.2e-190 670.6 598 60.0
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.8e-189 666.0 598 59.2
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.7e-189 665.6 624 56.7
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.7e-189 665.6 603 56.9
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 6.3e-189 664.8 597 59.8
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 8.2e-189 664.5 608 57.9
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.1e-188 664.1 598 58.9
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.4e-188 662.9 624 56.6
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.1e-188 662.1 606 57.8
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 1.2e-187 660.6 600 57.5
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 2.7e-187 659.4 600 58.3
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.5e-186 654.4 606 57.1
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.9e-185 653.3 622 55.5
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.6e-184 650.2 604 55.3
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 3.0e-183 646.0 595 59.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 2.9e-178 629.4 656 52.7
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.1e-176 623.2 604 54.6
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.3e-175 619.8 624 53.7
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 5.7e-174 615.1 599 54.4
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 7.5e-174 614.8 672 50.6
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 3.7e-173 612.5 579 57.2
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 8.3e-173 611.3 603 55.1
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.4e-172 609.8 559 58.7
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 3.1e-172 609.4 678 48.2
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.4e-172 608.6 609 52.5
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 2.7e-171 606.3 601 55.2
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 7.8e-171 604.7 613 54.6
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 7.8e-171 604.7 598 57.2
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 1.0e-170 604.4 607 55.2
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 5.0e-170 602.1 600 55.5
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 3.0e-167 592.8 606 54.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 6.8e-167 591.7 607 52.7
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 4.9e-165 585.5 612 52.1
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 7.0e-164 581.6 572 54.7
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.6e-163 580.5 450 69.1
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 3.5e-155 552.7 529 55.4
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.3e-153 546.2 404 71.0
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 7.3e-153 545.0 599 49.9
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 4.7e-152 542.3 599 50.1
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 6.2e-152 542.0 627 49.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 9.9e-150 534.6 599 50.9
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 3.7e-149 532.7 628 49.2
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 2.4e-148 530.0 644 47.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.6e-145 518.8 532 52.1
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 7.3e-145 518.5 618 45.8
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.6e-139 500.7 483 54.5
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.5e-139 499.6 666 45.5
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.3e-138 497.7 613 47.0
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.3e-138 497.7 611 46.8
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 3.9e-138 496.1 626 46.2
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 8.7e-138 495.0 621 46.4
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 2.4e-132 476.9 615 45.7
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.0e-130 469.9 650 45.1
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 5.1e-130 469.2 496 51.4
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.1e-129 468.0 505 51.9
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 5.6e-129 465.7 535 49.7
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 6.4e-125 452.2 626 43.1
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 3.0e-122 443.4 622 43.7
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 6.7e-122 442.2 613 41.3
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.3e-121 439.5 386 60.6
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.1e-120 437.2 584 43.8
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.4e-119 433.7 372 61.8
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 7.6e-118 428.7 419 53.2
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.9e-117 426.0 386 59.6
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.6e-115 421.0 615 39.3
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.9e-107 392.1 386 55.7
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 1.0e-101 375.2 566 41.5
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.3e-101 374.8 347 57.1
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.3e-96 358.2 613 38.3
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 8.0e-83 312.4 452 40.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 4.4e-81 306.6 296 56.8
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.2e-77 294.3 303 53.1
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 7.5e-73 279.3 459 40.5
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 3.3e-44 184.1 280 40.4
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 2.8e-43 181.0 168 54.8
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 6.8e-42 176.4 508 28.3
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 4.9e-40 170.2 575 28.2
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 1.1e-39 169.1 623 26.6
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.2e-38 165.6 651 25.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.5e-36 158.7 295 35.3
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 2.5e-36 157.9 169 52.1
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 8.9e-34 149.4 142 51.4
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.5e-33 146.4 96 77.1
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.2e-31 141.0 601 25.5
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 7.1e-23 113.2 97 63.9
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 6.9e-18 96.7 132 47.7
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 7.1e-15 86.7 75 57.3
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 3.6e-11 74.3 255 27.1
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.8e-11 73.9 60 56.7
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.8e-10 72.0 59 57.6
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.4e-10 71.6 68 50.0
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.2e-09 69.3 60 55.0
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.9e-07 62.0 48 60.4
FvH4_6g18901 Fragaria vesca HOM05D006351 ORTHO05D007796 2.7e-06 58.2 108 38.9


User provided reference genes

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