Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.5e-92 342.8 169 100.0
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 8.0e-62 240.7 125 96.8
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 3.2e-55 218.8 113 96.5
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 1.1e-42 177.2 142 71.8
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 7.3e-31 137.9 121 64.5
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 9.8e-28 127.5 112 63.4
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 1.2e-25 120.6 112 66.1
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 6.0e-25 118.2 112 60.7
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.3e-24 117.1 115 60.9
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 8.6e-24 114.4 114 60.5
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.5e-23 113.6 113 63.7
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 1.9e-23 113.2 110 62.7
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 3.3e-23 112.5 115 60.9
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 1.2e-22 110.5 112 60.7
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.6e-22 110.2 112 61.6
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 4.7e-22 108.6 112 57.1
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 6.2e-22 108.2 115 58.3
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 8.0e-22 107.8 119 60.5
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 8.0e-22 107.8 115 58.3
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 8.0e-22 107.8 118 58.5
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.1e-21 107.5 114 60.5
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.8e-21 106.7 117 58.1
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 1.8e-21 106.7 148 49.3
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 2.3e-21 106.3 91 64.8
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 2.3e-21 106.3 118 57.6
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 4.0e-21 105.5 96 62.5
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 6.8e-21 104.8 102 60.8
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 8.9e-21 104.4 111 61.3
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 8.9e-21 104.4 108 57.4
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.2e-20 104.0 66 78.8
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 2.0e-20 103.2 112 55.4
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 3.4e-20 102.4 112 55.4
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 7.5e-20 101.3 112 52.7
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 9.8e-20 100.9 107 57.0
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 9.8e-20 100.9 116 55.2
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 1.3e-19 100.5 72 65.3
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.7e-19 100.1 122 50.8
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 1.7e-19 100.1 111 55.9
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.7e-19 100.1 113 56.6
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.7e-19 100.1 129 51.2
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 2.9e-19 99.4 69 76.8
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.7e-19 99.0 113 52.2
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 4.9e-19 98.6 122 51.6
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 4.9e-19 98.6 110 55.5
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 6.4e-19 98.2 113 52.2
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 6.4e-19 98.2 117 54.7
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 8.3e-19 97.8 68 73.5
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 8.3e-19 97.8 117 54.7
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.4e-18 97.1 113 53.1
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.9e-18 96.7 113 51.3
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.2e-18 95.9 113 51.3
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 3.2e-18 95.9 107 56.1
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 4.1e-18 95.5 110 56.4
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 5.4e-18 95.1 123 53.7
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 9.2e-18 94.4 115 58.3
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 1.2e-17 94.0 111 56.8
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.2e-17 94.0 114 51.8
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.2e-17 94.0 64 78.1
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.2e-17 94.0 113 54.9
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.6e-17 93.6 112 49.1
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.6e-17 93.6 115 50.4
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 2.1e-17 93.2 107 53.3
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 2.1e-17 93.2 115 53.0
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 2.7e-17 92.8 62 80.6
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 3.5e-17 92.4 113 51.3
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 3.5e-17 92.4 116 55.2
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 6.0e-17 91.7 57 78.9
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 6.0e-17 91.7 112 53.6
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 6.0e-17 91.7 109 53.2
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 7.8e-17 91.3 106 56.6
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.0e-16 90.9 60 76.7
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-16 90.9 107 55.1
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-16 90.9 107 55.1
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.0e-16 90.9 107 55.1
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.0e-16 90.9 59 78.0
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.0e-16 90.9 109 55.0
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 1.3e-16 90.5 116 52.6
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.3e-16 90.5 108 53.7
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 3.0e-16 89.4 108 51.9
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.0e-16 89.4 109 53.2
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 3.9e-16 89.0 102 53.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 3.9e-16 89.0 102 52.9
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 5.1e-16 88.6 56 76.8
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 6.6e-16 88.2 108 54.6
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.5e-15 87.0 103 54.4
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.5e-15 87.0 103 54.4
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.5e-15 87.0 103 54.4
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.9e-15 86.7 102 52.0
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 2.5e-15 86.3 117 50.4
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 4.3e-15 85.5 108 50.9
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 4.3e-15 85.5 105 51.4
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 5.6e-15 85.1 106 52.8
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 7.3e-15 84.7 114 49.1
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 7.3e-15 84.7 58 75.9
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 9.5e-15 84.3 117 47.9
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 8.1e-14 81.3 112 52.7
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.4e-13 80.5 57 73.7
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.8e-13 80.1 52 73.1
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.7e-11 73.6 50 72.0
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 3.7e-11 72.4 50 68.0
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 3.7e-11 72.4 49 75.5
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 4.1e-10 68.9 81 50.6
Pp3c2_27910 Physcomitrium patens HOM05D006605 ORTHO05D008277 5.4e-10 68.6 81 50.6
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 7.8e-09 64.7 49 69.4
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 6.6e-08 61.6 45 68.9
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 7.3e-07 58.2 76 50.0
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 2.1e-06 56.6 29 89.7
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 3.6e-06 55.8 27 96.3
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 4.7e-06 55.5 28 89.3


User provided reference genes

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