Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02740 Davidia involucrata HOM05D004731 ORTHO05D005577 2.9e-93 345.1 164 100.0
Actinidia09705 Actinidia chinensis HOM05D004731 ORTHO05D005577 4.4e-81 304.7 188 79.3
Cpa.g.sc8.225 Carica papaya HOM05D004731 ORTHO05D005577 3.7e-80 301.6 188 78.7
COL.COLO4_27682 Corchorus olitorius HOM05D004731 ORTHO05D005577 3.7e-80 301.6 164 83.5
vmacro12222 Vaccinium macrocarpon HOM05D004731 ORTHO05D005577 1.8e-79 299.3 178 81.5
TAR624G1207 Trochodendron aralioides HOM05D004731 ORTHO05D005577 1.2e-78 296.6 178 78.1
Gorai.013G099800 Gossypium raimondii HOM05D004731 ORTHO05D005577 1.5e-78 296.2 188 75.5
Gohir.A13G093600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 5.9e-78 294.3 188 75.0
CiPaw.03G162000 Carya illinoinensis HOM05D004731 ORTHO05D005577 2.2e-77 292.4 188 75.5
GSVIVG01030608001 Vitis vinifera HOM05D004731 ORTHO05D005577 2.9e-77 292.0 188 76.6
Cfa014429 Carpinus fangiana HOM05D004731 ORTHO05D005577 6.5e-77 290.8 188 73.4
Cc05_g04940 Coffea canephora HOM05D004731 ORTHO05D005577 1.1e-76 290.0 173 80.9
PGR142G3606 Punica granatum HOM05D004731 ORTHO05D005577 1.1e-76 290.0 188 72.3
Manes.12G076000 Manihot esculenta HOM05D004731 ORTHO05D005577 1.4e-76 289.7 188 73.4
RcHm_v2.0_Chr2g0159821 Rosa chinensis HOM05D004731 ORTHO05D005577 1.4e-76 289.7 186 74.7
FvH4_6g43440 Fragaria vesca HOM05D004731 ORTHO05D005577 1.9e-76 289.3 186 74.2
Thecc.02G312600 Theobroma cacao HOM05D004731 ORTHO05D005577 1.9e-76 289.3 186 74.7
Rhsim06G0159200 Rhododendron simsii HOM05D004731 ORTHO05D005577 2.5e-76 288.9 213 68.1
Atru.chr6.3161 Acer truncatum HOM05D004731 ORTHO05D005577 4.2e-76 288.1 188 73.9
DCAR_012950 Daucus carota HOM05D004731 ORTHO05D005577 4.2e-76 288.1 187 75.4
Gorai.005G150300 Gossypium raimondii HOM05D004731 ORTHO05D005577 4.2e-76 288.1 188 72.9
CSS0029719 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 5.5e-76 287.7 188 75.5
CSS0044333 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 5.5e-76 287.7 188 75.5
Gohir.A03G109600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 7.2e-76 287.3 188 73.4
Lj1P757T15 Lonicera japonica HOM05D004731 ORTHO05D005577 7.2e-76 287.3 186 75.3
Potri.007G122900 Populus trichocarpa HOM05D004731 ORTHO05D005577 9.4e-76 287.0 186 74.7
Eucgr.K00802 Eucalyptus grandis HOM05D004731 ORTHO05D005577 1.6e-75 286.2 188 73.4
Prupe.3G219100 Prunus persica HOM05D004731 ORTHO05D005577 1.6e-75 286.2 188 72.3
Ciclev10014655m.g Citrus clementina HOM05D004731 ORTHO05D005577 2.1e-75 285.8 186 73.7
CsaV3_2G035120 Cucumis sativus L. HOM05D004731 ORTHO05D005577 2.1e-75 285.8 188 72.3
QL08p033580 Quercus lobata HOM05D004731 ORTHO05D005577 2.7e-75 285.4 187 73.8
ClCG02G008490 Citrullus lanatus HOM05D004731 ORTHO05D005577 8.0e-75 283.9 195 69.7
Migut.M00410 Erythranthe guttata HOM05D004731 ORTHO05D005577 8.0e-75 283.9 186 72.6
Gohir.D02G134400 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.0e-74 283.5 188 72.3
Sabra07G0099600 Salix brachista HOM05D004731 ORTHO05D005577 1.0e-74 283.5 186 73.7
CANSAT64G0826 Cannabis sativa HOM05D004731 ORTHO05D005577 1.8e-74 282.7 186 73.7
QL08p033547 Quercus lobata HOM05D004731 ORTHO05D005577 2.3e-74 282.3 187 72.7
Potri.017G036900 Populus trichocarpa HOM05D004731 ORTHO05D005577 3.0e-74 282.0 186 73.7
Sed0023583 Sechium edule HOM05D004731 ORTHO05D005577 3.0e-74 282.0 188 70.7
MD09G1106500 Malus domestica HOM05D004731 ORTHO05D005577 5.2e-74 281.2 188 70.7
Oeu011087.1 Olea europaea HOM05D004731 ORTHO05D005577 5.2e-74 281.2 188 72.9
ECA233G0706 Erigeron canadensis HOM05D004731 ORTHO05D005577 6.7e-74 280.8 186 75.3
FAN05G5305 Fragaria x ananassa HOM05D004731 ORTHO05D005577 6.7e-74 280.8 207 66.2
Lsat_1_v5_gn_8_128420 Lactuca sativa HOM05D004731 ORTHO05D005577 8.8e-74 280.4 185 74.6
MBI02_g10107_MAGBIO Magnolia biondii HOM05D004731 ORTHO05D005577 1.1e-73 280.0 178 76.4
TWI36G0780 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 1.1e-73 280.0 188 71.8
HanXRQChr04g0110581 Helianthus annuus HOM05D004731 ORTHO05D005577 1.5e-73 279.6 186 74.7
Manes.13G072200 Manihot esculenta HOM05D004731 ORTHO05D005577 3.3e-73 278.5 188 71.8
DCAR_021183 Daucus carota HOM05D004731 ORTHO05D005577 4.4e-73 278.1 188 72.9
CAN.G921.14 Capsicum annuum HOM05D004731 ORTHO05D005577 5.7e-73 277.7 186 72.6
BcaC05g28137 Brassica carinata HOM05D004731 ORTHO05D005577 7.4e-73 277.3 186 72.0
A05p27010 Brassica napus HOM05D004731 ORTHO05D005577 7.4e-73 277.3 186 72.0
C05p41690 Brassica napus HOM05D004731 ORTHO05D005577 7.4e-73 277.3 186 72.0
BolC5t32904H Brassica oleracea HOM05D004731 ORTHO05D005577 7.4e-73 277.3 186 72.0
EL10Ac8g18891 Beta vulgaris HOM05D004731 ORTHO05D005577 9.7e-73 276.9 176 73.3
Hund24408 Selenicereus undatus HOM05D004731 ORTHO05D005577 1.3e-72 276.6 186 71.5
BraA05t21584Z Brassica rapa HOM05D004731 ORTHO05D005577 1.7e-72 276.2 186 71.5
Aa31LG8G8350 Aethionema arabicum HOM05D004731 ORTHO05D005577 2.2e-72 275.8 188 70.7
BcaB06g26278 Brassica carinata HOM05D004731 ORTHO05D005577 2.2e-72 275.8 186 71.5
A03p42440 Brassica napus HOM05D004731 ORTHO05D005577 2.2e-72 275.8 186 71.5
BraA03t13397Z Brassica rapa HOM05D004731 ORTHO05D005577 2.2e-72 275.8 186 71.5
Peaxi162Scf00007g01115 Petunia axillaris HOM05D004731 ORTHO05D005577 2.2e-72 275.8 186 72.6
Sopen07g026110 Solanum pennellii HOM05D004731 ORTHO05D005577 2.8e-72 275.4 186 71.5
Thhalv10022122m.g Eutrema salsugineum HOM05D004731 ORTHO05D005577 3.7e-72 275.0 186 71.0
PSO675G8406 Papaver somniferum HOM05D004731 ORTHO05D005577 3.7e-72 275.0 188 70.7
BcaC01g03487 Brassica carinata HOM05D004731 ORTHO05D005577 4.8e-72 274.6 186 71.0
C03p51920 Brassica napus HOM05D004731 ORTHO05D005577 4.8e-72 274.6 186 71.0
BolC3t17478H Brassica oleracea HOM05D004731 ORTHO05D005577 4.8e-72 274.6 186 71.0
Nitab4.5_0001176g0080 Nicotiana tabacum HOM05D004731 ORTHO05D005577 6.3e-72 274.2 186 72.0
Nitab4.5_0010201g0030 Nicotiana tabacum HOM05D004731 ORTHO05D005577 6.3e-72 274.2 186 72.0
PSO541G0248 Papaver somniferum HOM05D004731 ORTHO05D005577 6.3e-72 274.2 188 70.2
CARHR097670 Cardamine hirsuta HOM05D004731 ORTHO05D005577 1.1e-71 273.5 186 71.5
AUR62028388 Chenopodium quinoa HOM05D004731 ORTHO05D005577 1.1e-71 273.5 186 69.4
Sp3g19730 Schrenkiella parvula HOM05D004731 ORTHO05D005577 1.1e-71 273.5 186 70.4
Carub.0003s2177 Capsella rubella HOM05D004731 ORTHO05D005577 1.4e-71 273.1 186 71.0
BcaB04g20567 Brassica carinata HOM05D004731 ORTHO05D005577 1.8e-71 272.7 186 70.4
BcaB04g20569 Brassica carinata HOM05D004731 ORTHO05D005577 2.4e-71 272.3 185 70.3
FAN09G0477 Fragaria x ananassa HOM05D004731 ORTHO05D005577 2.4e-71 272.3 234 59.4
Nn1g03615 Nelumbo nucifera HOM05D004731 ORTHO05D005577 2.4e-71 272.3 188 69.1
THA.LOC104808494 Tarenaya hassleriana HOM05D004731 ORTHO05D005577 2.4e-71 272.3 189 69.3
Aqoxy4G01979 Aquilegia oxysepala HOM05D004731 ORTHO05D005577 3.1e-71 271.9 188 69.1
AT3G21720 Arabidopsis thaliana HOM05D004731 ORTHO05D005577 5.3e-71 271.2 186 69.9
TWI75G0012 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 5.3e-71 271.2 188 70.7
FAN02G3012 Fragaria x ananassa HOM05D004731 ORTHO05D005577 9.1e-71 270.4 233 58.8
PGSC0003DMG400025487 Solanum tuberosum HOM05D004731 ORTHO05D005577 9.1e-71 270.4 186 70.4
AL3G35840 Arabidopsis lyrata HOM05D004731 ORTHO05D005577 1.2e-70 270.0 186 69.4
Nn1g07047 Nelumbo nucifera HOM05D004731 ORTHO05D005577 1.2e-70 270.0 189 68.8
Nitab4.5_0003509g0010 Nicotiana tabacum HOM05D004731 ORTHO05D005577 2.6e-70 268.9 186 71.5
DCAR_019287 Daucus carota HOM05D004731 ORTHO05D005577 5.9e-70 267.7 186 72.0
Phvul.011G105500 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 1.0e-69 266.9 186 67.7
Phvul.011G106801 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 1.0e-69 266.9 186 67.7
ATR0697G058 Amborella trichopoda HOM05D004731 ORTHO05D005577 5.0e-69 264.6 180 71.1
Lalb_Chr19g0135731 Lupinus albus HOM05D004731 ORTHO05D005577 6.5e-69 264.2 186 69.4
Glyma.12G100500 Glycine max HOM05D004731 ORTHO05D005577 1.1e-68 263.5 188 64.9
Ah.09g228590 Amaranthus hybridus HOM05D004731 ORTHO05D005577 3.2e-68 261.9 177 71.8
ATR0697G164 Amborella trichopoda HOM05D004731 ORTHO05D005577 5.5e-68 261.2 180 69.4
arahy.Tifrunner.gnm1.ann1.TKPZ56 Arachis hypogaea HOM05D004731 ORTHO05D005577 9.4e-68 260.4 186 68.8
AUR62039771 Chenopodium quinoa HOM05D004731 ORTHO05D005577 9.4e-68 260.4 186 66.1
Lj3g0018668 Lotus japonicus HOM05D004731 ORTHO05D005577 1.6e-67 259.6 186 67.2
VMungo1127G2299 Vigna mungo HOM05D004731 ORTHO05D005577 2.1e-67 259.2 186 66.1
arahy.Tifrunner.gnm1.ann1.X0NGMJ Arachis hypogaea HOM05D004731 ORTHO05D005577 4.7e-67 258.1 186 68.3
Psat7g179960 Pisum sativum HOM05D004731 ORTHO05D005577 6.1e-67 257.7 187 66.8
FAN14G3935 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.4e-66 256.5 130 88.5
CDE11G0460 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 1.8e-66 256.1 178 70.2
Glyma.06G303200 Glycine max HOM05D004731 ORTHO05D005577 8.8e-66 253.8 186 64.5
HPP92_012326 Vanilla planifolia HOM05D004731 ORTHO05D005577 1.2e-65 253.4 186 64.0
Medtr4g046757 Medicago truncatula HOM05D004731 ORTHO05D005577 2.6e-65 252.3 187 64.7
ATR0697G137 Amborella trichopoda HOM05D004731 ORTHO05D005577 3.3e-65 251.9 132 85.6
MELO3C019243.2 Cucumis melo HOM05D004731 ORTHO05D005577 5.7e-65 251.1 132 86.4
SGA_v2.0_scaffold34G13870 Striga asiatica HOM05D004731 ORTHO05D005577 5.7e-65 251.1 130 88.5
SalBow7G1245 Salvia bowleyana HOM05D004731 ORTHO05D005577 7.5e-65 250.8 130 88.5
MD17G1094300 Malus domestica HOM05D004731 ORTHO05D005577 1.7e-64 249.6 132 84.8
SEGI_12486 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 1.4e-63 246.5 187 63.6
Haze_12887 Corylus avellana HOM05D004731 ORTHO05D005577 3.1e-63 245.4 176 67.6
Ca_27733_v3 Cicer arietinum L. HOM05D004731 ORTHO05D005577 5.3e-63 244.6 196 62.2
unitig_899.g15245 Utricularia gibba HOM05D004731 ORTHO05D005577 1.0e-61 240.4 130 84.6
SEGI_22707 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 2.2e-61 239.2 187 63.6
Os07g0529000 Oryza sativa ssp. japonica HOM05D004731 ORTHO05D005577 2.9e-61 238.8 186 62.9
Zm00001eb323090 Zea mays HOM05D004731 ORTHO05D005577 3.4e-57 225.3 186 61.8
Lalb_Chr03g0028811 Lupinus albus HOM05D004731 ORTHO05D005577 1.8e-55 219.5 130 75.4
AagrBONN_evm.TU.Sc2ySwM_344.2376 Anthoceros agrestis HOM05D004731 ORTHO05D005577 2.0e-54 216.1 141 68.8
CBR_g8290 Chara braunii HOM05D004731 ORTHO05D005577 2.7e-54 215.7 186 58.1
SMO196G0149 Selaginella moellendorffii HOM05D004731 ORTHO05D005577 3.5e-54 215.3 185 58.4
Gohir.D13G087500 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.6e-51 206.5 105 88.6
Pp3c7_2440 Physcomitrium patens HOM05D004731 ORTHO05D005577 1.4e-50 203.4 141 68.1
Pp3c7_2470 Physcomitrium patens HOM05D004731 ORTHO05D005577 1.4e-50 203.4 141 68.1
Mapoly0023s0108 Marchantia polymorpha HOM05D004731 ORTHO05D005577 4.9e-48 194.9 132 64.4
Mapoly0115s0061 Marchantia polymorpha HOM05D004731 ORTHO05D005577 1.6e-46 189.9 140 64.3
Peaxi162Scf00932g00022 Petunia axillaris HOM05D004731 ORTHO05D005577 3.6e-43 178.7 96 86.5
CDE05G2280 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 1.0e-42 177.2 90 85.6
Cfa025720 Carpinus fangiana HOM05D004731 ORTHO05D005577 2.8e-35 152.5 161 49.1
Cfa027059 Carpinus fangiana HOM05D004731 ORTHO05D005577 2.1e-27 126.3 130 44.6
Cre06.g282800 Chlamydomonas reinhardtii HOM05D004731 ORTHO05D005577 8.3e-24 114.4 132 43.2
Haze_27171 Corylus avellana HOM05D004731 ORTHO05D005577 2.1e-19 99.8 131 42.7
HPP92_012389 Vanilla planifolia HOM05D004731 ORTHO05D005577 2.4e-15 86.3 58 65.5
Dinv39693 Davidia involucrata HOM05D004731 ORTHO05D005577 3.2e-15 85.9 43 93.0
BcaB04g20566 Brassica carinata HOM05D004731 ORTHO05D005577 2.3e-13 79.7 46 76.1
HPP92_012390 Vanilla planifolia HOM05D004731 ORTHO05D005577 3.3e-12 75.9 83 48.2
CDE05G2484 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 4.4e-09 65.5 73 53.4


User provided reference genes

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