Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv02140 Davidia involucrata HOM05D004403 ORTHO05D006164 3.2e-98 361.7 177 100.0
Dinv02142 Davidia involucrata HOM05D004403 ORTHO05D006164 6.8e-96 354.0 177 97.7
Dinv02141 Davidia involucrata HOM05D004403 ORTHO05D006164 3.1e-85 318.5 156 98.7
Dinv00168 Davidia involucrata HOM05D004403 ORTHO05D006164 1.6e-84 316.2 158 96.8
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 1.8e-72 276.2 156 82.7
Hma1.2p1_0099F.1_g048890 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 1.8e-72 276.2 156 82.7
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 3.7e-70 268.5 156 80.8
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 5.4e-69 264.6 158 78.5
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 5.0e-67 258.1 156 76.3
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 3.6e-65 251.9 156 75.0
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 3.6e-65 251.9 159 75.5
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 1.1e-64 250.4 156 75.6
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 4.0e-64 248.4 156 75.0
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 5.2e-64 248.1 157 75.8
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 2.0e-63 246.1 157 73.9
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 2.6e-63 245.7 156 76.3
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 2.6e-63 245.7 157 73.2
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 5.8e-63 244.6 157 73.9
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 1.7e-62 243.0 158 72.2
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 2.9e-62 242.3 161 70.2
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 3.7e-62 241.9 156 72.4
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 4.9e-62 241.5 161 70.8
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 1.1e-61 240.4 157 70.7
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.1e-61 240.4 157 70.7
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 7.1e-61 237.7 157 69.4
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 7.1e-61 237.7 157 69.4
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 7.1e-61 237.7 157 69.4
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 2.1e-60 236.1 157 70.7
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 3.5e-60 235.3 156 67.3
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 4.6e-60 235.0 158 72.2
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.6e-60 235.0 157 68.8
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 6.0e-60 234.6 156 69.2
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 1.0e-59 233.8 158 72.8
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 1.3e-59 233.4 157 67.5
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 1.7e-59 233.0 158 67.7
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 2.3e-59 232.6 157 69.4
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 3.0e-59 232.3 156 68.6
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 3.0e-59 232.3 156 68.6
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 3.9e-59 231.9 161 66.5
ClCG09G013360 Citrullus lanatus HOM05D004403 ORTHO05D006164 1.1e-58 230.3 156 69.2
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 1.1e-58 230.3 157 69.4
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 1.5e-58 229.9 156 67.9
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 1.5e-58 229.9 162 66.0
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 2.5e-58 229.2 157 70.1
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 2.8e-57 225.7 158 65.8
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 2.8e-57 225.7 162 65.4
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 1.1e-56 223.8 156 67.3
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 1.4e-56 223.4 158 69.6
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 3.1e-56 222.2 159 65.4
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 3.1e-56 222.2 162 66.0
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 3.1e-56 222.2 158 67.7
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 4.0e-56 221.9 163 64.4
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 5.2e-56 221.5 159 65.4
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 1.5e-55 219.9 161 64.6
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 2.0e-55 219.5 156 65.4
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 2.0e-55 219.5 156 67.3
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 3.4e-55 218.8 168 65.5
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 4.4e-55 218.4 163 62.6
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 9.9e-55 217.2 168 64.9
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 1.3e-54 216.9 161 64.6
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 2.2e-54 216.1 166 62.0
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 2.2e-54 216.1 166 62.0
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 1.1e-53 213.8 166 61.4
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 1.1e-53 213.8 166 61.4
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 1.4e-53 213.4 161 62.7
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 1.4e-53 213.4 166 61.4
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 4.1e-53 211.8 163 65.0
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 9.2e-53 210.7 156 65.4
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 9.2e-53 210.7 160 64.4
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 9.2e-53 210.7 160 64.4
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 1.6e-52 209.9 161 62.7
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 1.6e-52 209.9 162 63.0
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 2.1e-52 209.5 158 66.5
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 2.7e-52 209.1 156 64.7
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 3.5e-52 208.8 159 63.5
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 3.5e-52 208.8 156 64.7
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 7.8e-52 207.6 168 62.5
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 1.0e-51 207.2 156 64.1
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 1.7e-51 206.5 162 63.0
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 8.6e-51 204.1 164 61.0
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 2.5e-50 202.6 162 59.9
HPP92_003516 Vanilla planifolia HOM05D004403 ORTHO05D006164 2.5e-50 202.6 156 59.0
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 3.3e-50 202.2 160 66.2
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 5.6e-50 201.4 165 60.0
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 2.8e-49 199.1 164 61.0
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 2.8e-49 199.1 147 64.6
SHI13862 Sapria himalayana HOM05D004403 ORTHO05D006164 2.8e-49 199.1 156 60.9
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 4.7e-49 198.4 160 62.5
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 6.2e-49 198.0 158 63.3
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 8.1e-49 197.6 158 62.7
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 3.1e-48 195.7 162 59.9
Cpa.g.sc3.267 Carica papaya HOM05D004403 ORTHO05D006164 5.2e-48 194.9 156 64.7
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 8.9e-48 194.1 162 59.3
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 1.2e-47 193.7 160 63.8
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 1.5e-47 193.4 163 60.1
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 4.8e-41 171.8 223 43.9
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 2.4e-40 169.5 108 69.4
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 5.3e-40 168.3 162 54.9
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 9.9e-39 164.1 156 53.2
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 2.4e-37 159.5 175 51.4
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 7.1e-37 157.9 158 49.4
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 1.3e-35 153.7 165 50.3
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 2.3e-35 152.9 173 47.4
Dinv28531 Davidia involucrata HOM05D004403 ORTHO05D006164 1.1e-34 150.6 90 82.2
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 2.5e-34 149.4 172 46.5
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 9.3e-29 131.0 113 55.8
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 1.2e-28 130.6 201 35.3
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 1.8e-27 126.7 168 44.0
TPR.G35938 Trifolium pratense HOM05D004403 ORTHO05D006164 5.0e-14 82.0 53 73.6
CDE04G0245 Ceratophyllum demersum HOM05D002993 ORTHO05D003432 2.7e-12 76.3 149 35.6
MCO07G456 Micromonas commoda HOM05D004403 ORTHO05D006164 3.0e-11 72.8 151 29.1
Cre13.g573450 Chlamydomonas reinhardtii HOM05D004403 ORTHO05D006164 3.9e-11 72.4 186 31.7
PRCOL_00006166 Prasinoderma coloniale HOM05D004403 ORTHO05D006164 1.7e-06 57.0 181 27.1


User provided reference genes

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