Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 6.0e-109 399.1 192 100.0
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.9e-83 314.3 173 84.4
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.8e-81 307.8 168 87.5
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 2.0e-80 304.3 171 80.7
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 9.3e-78 295.4 168 84.5
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.7e-77 293.9 172 77.9
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 4.6e-77 293.1 173 76.9
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 1.3e-76 291.6 170 80.0
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 7.4e-75 285.8 173 75.1
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 2.1e-74 284.3 172 76.2
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 2.1e-74 284.3 172 76.7
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 2.8e-74 283.9 172 76.7
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 4.8e-74 283.1 173 76.3
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 4.8e-74 283.1 172 76.7
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.4e-73 281.6 168 76.2
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 3.1e-73 280.4 171 78.4
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 6.9e-73 279.3 164 79.3
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 9.0e-73 278.9 168 75.0
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 1.2e-72 278.5 172 75.6
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 1.5e-72 278.1 173 75.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 3.4e-72 276.9 173 73.4
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 3.4e-72 276.9 176 74.4
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 3.4e-72 276.9 179 74.9
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 4.5e-72 276.6 170 75.9
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 7.6e-72 275.8 173 73.4
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 7.6e-72 275.8 173 74.6
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 7.6e-72 275.8 168 73.8
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 7.6e-72 275.8 199 70.4
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 9.9e-72 275.4 192 68.2
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 2.2e-71 274.2 173 72.8
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 2.9e-71 273.9 163 77.9
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 8.4e-71 272.3 179 67.0
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 1.9e-70 271.2 175 73.7
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 3.2e-70 270.4 174 74.1
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.2e-69 268.5 182 68.7
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.6e-69 268.1 175 70.9
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 2.7e-69 267.3 192 66.1
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 1.0e-68 265.4 169 71.0
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 2.3e-68 264.2 171 73.7
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 3.0e-68 263.8 192 63.5
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 3.0e-68 263.8 173 69.4
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 8.7e-68 262.3 172 73.3
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.1e-67 261.9 171 70.2
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.5e-67 261.5 172 72.7
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 2.5e-67 260.8 171 69.6
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 3.3e-67 260.4 168 70.2
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 7.4e-67 259.2 169 71.0
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.6e-66 258.1 169 71.0
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 1.6e-66 258.1 172 72.1
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 3.7e-66 256.9 173 68.8
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 6.2e-66 256.1 152 76.3
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 8.2e-66 255.8 169 69.8
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 1.8e-65 254.6 171 67.8
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 1.2e-64 251.9 180 65.0
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 2.6e-64 250.8 171 66.7
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 2.6e-64 250.8 171 67.3
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 3.4e-64 250.4 192 62.0
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 5.8e-64 249.6 185 62.2
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 5.8e-64 249.6 161 70.8
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.7e-63 248.1 172 70.3
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 4.9e-63 246.5 161 70.2
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 2.5e-62 244.2 197 59.4
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 9.3e-62 242.3 169 63.3
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.2e-61 241.9 169 62.7
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.2e-61 241.9 164 72.0
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 2.3e-60 237.7 184 60.9
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 2.3e-60 237.7 164 65.2
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 2.3e-60 237.7 211 57.3
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 3.0e-60 237.3 155 70.3
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 3.9e-60 236.9 164 65.2
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 5.1e-60 236.5 164 65.2
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.1e-59 235.3 164 64.6
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.1e-59 235.3 164 64.6
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.1e-59 235.3 159 67.3
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.9e-59 234.6 163 65.6
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.9e-59 234.6 163 65.6
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 4.3e-59 233.4 129 84.5
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 4.3e-59 233.4 159 66.7
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 2.2e-58 231.1 159 65.4
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 4.1e-57 226.9 179 60.3
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 3.8e-55 220.3 130 79.2
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 2.5e-54 217.6 148 67.6
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 2.1e-53 214.5 182 58.8
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 4.6e-53 213.4 153 64.1
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.8e-52 211.5 136 70.6
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 8.8e-52 209.1 186 55.9
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 2.0e-51 208.0 153 61.4
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 2.5e-51 207.6 169 59.8
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 8.8e-44 182.6 168 54.8
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 8.8e-44 182.6 111 76.6
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 1.3e-42 178.7 162 53.7
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 4.2e-38 163.7 113 69.9
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 5.0e-31 140.2 102 61.8
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.9e-30 138.3 129 55.0
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 3.0e-28 131.0 74 79.7
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 2.2e-23 114.8 130 40.8
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 3.0e-20 104.4 128 36.7
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 4.0e-20 104.0 135 35.6
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 2.8e-18 97.8 56 78.6
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 3.1e-17 94.4 139 33.8
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.1e-17 94.0 53 77.4
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.6e-16 92.0 54 74.1
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 2.7e-16 91.3 131 36.6
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 1.3e-15 89.0 67 62.7
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 9.5e-14 82.8 83 50.6
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 6.3e-10 70.1 89 48.3
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 9.2e-09 66.2 99 40.4
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 4.5e-08 63.9 45 60.0
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 5.9e-08 63.5 50 52.0
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 5.9e-08 63.5 37 73.0
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 1.7e-07 62.0 39 66.7


User provided reference genes

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