Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 2.6e-74 282.0 139 100.0
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 7.5e-74 280.4 139 99.3
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 1.6e-68 262.7 139 92.1
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 6.1e-68 260.8 139 89.9
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 6.8e-67 257.3 139 88.5
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 1.2e-66 256.5 139 89.9
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 4.4e-66 254.6 139 88.5
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 1.7e-65 252.7 139 86.3
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 3.7e-65 251.5 139 86.3
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 4.8e-65 251.1 139 87.1
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 6.3e-65 250.8 138 87.7
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 9.1e-64 246.9 139 84.9
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 3.5e-63 245.0 139 84.2
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 4.5e-63 244.6 139 83.5
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 4.5e-63 244.6 139 83.5
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 4.5e-63 244.6 139 83.5
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 4.5e-63 244.6 138 84.1
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 5.9e-63 244.2 138 86.2
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 5.9e-63 244.2 139 84.9
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 7.7e-63 243.8 139 82.0
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 7.7e-63 243.8 138 84.8
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 7.7e-63 243.8 139 84.9
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 7.7e-63 243.8 138 87.0
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 1.7e-62 242.7 139 84.2
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 2.2e-62 242.3 139 81.3
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 3.8e-62 241.5 139 82.7
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 3.8e-62 241.5 139 82.0
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 5.0e-62 241.1 139 84.2
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 6.5e-62 240.7 139 82.0
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 1.1e-61 240.0 139 82.7
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 1.9e-61 239.2 139 84.2
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 2.5e-61 238.8 139 83.5
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 5.5e-61 237.7 138 84.1
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 7.2e-61 237.3 139 84.9
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 9.4e-61 236.9 139 83.5
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 9.4e-61 236.9 139 82.7
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 1.2e-60 236.5 139 80.6
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 1.2e-60 236.5 139 81.3
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 1.2e-60 236.5 139 82.7
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 1.6e-60 236.1 139 82.0
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.6e-60 236.1 139 80.6
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 2.1e-60 235.7 139 82.7
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 2.1e-60 235.7 139 82.7
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 2.7e-60 235.3 139 82.0
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 4.7e-60 234.6 139 82.7
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 4.7e-60 234.6 139 82.0
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 4.7e-60 234.6 139 80.6
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 8.0e-60 233.8 139 79.9
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.4e-59 233.0 137 82.5
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 2.3e-59 232.3 139 81.3
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 2.3e-59 232.3 137 81.8
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 5.2e-59 231.1 128 84.4
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 5.2e-59 231.1 139 79.1
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 8.8e-59 230.3 137 82.5
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 8.8e-59 230.3 139 79.1
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 8.8e-59 230.3 139 80.6
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 1.2e-58 229.9 129 86.8
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 1.2e-58 229.9 137 81.0
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 2.0e-58 229.2 139 80.6
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 2.6e-58 228.8 137 80.3
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 4.4e-58 228.0 139 80.6
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 5.7e-58 227.6 139 79.9
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 9.8e-58 226.9 137 80.3
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 9.8e-58 226.9 140 77.9
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.3e-57 226.5 127 85.8
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.3e-57 226.5 127 85.8
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 2.8e-57 225.3 141 78.7
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.1e-56 223.4 136 77.9
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.1e-56 223.4 136 77.2
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 5.4e-56 221.1 141 75.2
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 9.1e-56 220.3 129 83.7
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 1.6e-55 219.5 136 80.9
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 7.7e-55 217.2 169 67.5
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 2.9e-54 215.3 139 74.8
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 3.8e-54 214.9 132 79.5
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 8.6e-54 213.8 139 75.5
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 1.9e-53 212.6 139 74.8
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 9.5e-53 210.3 139 74.1
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 1.6e-52 209.5 139 74.1
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.8e-52 208.8 139 74.8
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 3.6e-52 208.4 139 74.1
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 3.6e-52 208.4 139 73.4
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 3.6e-52 208.4 129 76.0
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 4.7e-52 208.0 139 72.7
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 8.0e-52 207.2 139 73.4
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.0e-51 206.8 129 78.3
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 1.4e-51 206.5 137 70.8
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.8e-51 206.1 139 71.2
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 1.8e-51 206.1 130 74.6
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 2.3e-51 205.7 139 71.2
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 3.0e-51 205.3 139 71.2
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 4.0e-51 204.9 139 71.9
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 4.0e-51 204.9 139 73.4
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 4.0e-51 204.9 139 74.1
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 4.0e-51 204.9 139 71.2
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 6.8e-51 204.1 139 71.9
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 8.9e-51 203.8 139 71.9
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 1.2e-50 203.4 139 71.9
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.5e-50 203.0 139 70.5
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.0e-50 202.6 139 71.2
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 2.0e-50 202.6 139 71.2
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 2.0e-50 202.6 139 71.2
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 4.4e-50 201.4 139 70.5
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 9.8e-50 200.3 139 71.2
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 2.2e-49 199.1 139 66.9
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 5.4e-48 194.5 139 67.6
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 1.0e-46 190.3 159 62.9
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 6.6e-46 187.6 129 72.1
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 8.6e-46 187.2 131 70.2
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 3.4e-34 148.7 139 52.5
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 3.7e-33 145.2 133 53.4
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 2.4e-32 142.5 136 52.9
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.3e-30 136.7 79 78.5
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 1.7e-30 136.3 134 50.0
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 6.4e-25 117.9 73 78.1
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.4e-24 116.7 72 76.4
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 7.1e-24 114.4 143 41.3
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 3.9e-22 108.6 104 55.8
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 2.5e-21 105.9 56 89.3
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 9.6e-21 104.0 63 73.0
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 2.8e-20 102.4 52 90.4
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 4.7e-20 101.7 63 71.4
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 4.0e-19 98.6 52 86.5
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 6.8e-19 97.8 52 88.5
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 5.8e-18 94.7 59 71.2
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.4e-08 63.5 60 55.0
MCO11G935 Micromonas commoda HOM05D005650 ORTHO05D007020 2.1e-07 59.7 137 30.7


User provided reference genes

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