Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00626 Davidia involucrata HOM05D007544 ORTHO05D009682 3.2e-163 578.6 331 100.0
Dinv09698 Davidia involucrata HOM05D007544 ORTHO05D009682 1.4e-131 473.4 357 75.4
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 3.2e-131 472.2 357 75.4
Dinv28085 Davidia involucrata HOM05D007544 ORTHO05D009682 1.9e-120 436.4 342 74.9
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 3.1e-94 349.4 375 54.9
Dinv12873 Davidia involucrata HOM05D007544 ORTHO05D009682 1.1e-75 287.7 254 69.7
Dinv22040 Davidia involucrata HOM05D007544 ORTHO05D009682 5.5e-75 285.4 228 74.1
Dinv03400 Davidia involucrata HOM05D007544 ORTHO05D009682 3.3e-72 276.2 255 67.5
Dinv33672 Davidia involucrata HOM05D007544 ORTHO05D009682 3.3e-72 276.2 255 67.5
Dinv36805 Davidia involucrata HOM05D007544 ORTHO05D009682 3.3e-72 276.2 255 67.5
Dinv01822 Davidia involucrata HOM05D007544 ORTHO05D009682 1.4e-70 270.8 255 66.7
Dinv00183 Davidia involucrata HOM05D007544 ORTHO05D009682 1.8e-70 270.4 256 75.4
Dinv35460 Davidia involucrata HOM05D007544 ORTHO05D009682 1.3e-68 264.2 255 67.1
Dinv16907 Davidia involucrata HOM05D007544 ORTHO05D009682 2.9e-68 263.1 256 66.8
Dinv22079 Davidia involucrata HOM05D007544 ORTHO05D009682 5.0e-68 262.3 255 66.7
Dinv02393 Davidia involucrata HOM05D007544 ORTHO05D009682 1.5e-67 260.8 256 66.8
Dinv09688 Davidia involucrata HOM05D007544 ORTHO05D009682 2.5e-67 260.0 239 76.6
Dinv32082 Davidia involucrata HOM05D007544 ORTHO05D009682 1.8e-65 253.8 248 74.2
Dinv27416 Davidia involucrata HOM05D007544 ORTHO05D009682 6.5e-60 235.3 240 65.4
Dinv32158 Davidia involucrata HOM05D007544 ORTHO05D009682 8.5e-60 235.0 241 65.1
Dinv06169 Davidia involucrata HOM05D007544 ORTHO05D009682 5.2e-49 199.1 255 56.9
Dinv29936 Davidia involucrata HOM05D007544 ORTHO05D009682 1.8e-41 174.1 240 55.8
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 7.8e-37 158.7 329 34.0
Dinv03026 Davidia involucrata HOM05D007544 ORTHO05D009682 1.5e-32 144.4 271 38.0
Dinv15864 Davidia involucrata HOM05D007544 ORTHO05D009682 7.5e-32 142.1 227 43.2
Dinv00856 Davidia involucrata HOM05D007544 ORTHO05D009682 1.0e-28 131.7 132 59.8
Dinv01338 Davidia involucrata HOM05D007544 ORTHO05D009682 7.3e-27 125.6 135 54.8
Dinv09833 Davidia involucrata HOM05D007544 ORTHO05D009682 1.2e-26 124.8 84 72.6
Dinv17918 Davidia involucrata HOM05D007544 ORTHO05D009682 8.1e-26 122.1 143 70.6
Dinv01655 Davidia involucrata HOM05D007544 ORTHO05D009682 6.4e-23 112.5 273 35.2
Dinv26312 Davidia involucrata HOM05D007544 ORTHO05D009682 1.0e-20 105.1 218 35.3
Dinv26333 Davidia involucrata HOM05D007544 ORTHO05D009682 1.0e-20 105.1 218 35.3
Dinv16439 Davidia involucrata HOM05D007544 ORTHO05D009682 1.3e-20 104.8 228 45.2
Dinv24636 Davidia involucrata HOM05D007544 ORTHO05D009682 7.3e-19 99.0 66 71.2
Dinv01658 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-18 97.4 237 35.0
Dinv29335 Davidia involucrata HOM05D007544 ORTHO05D009682 8.1e-18 95.5 52 84.6
Dinv26738 Davidia involucrata HOM05D007544 ORTHO05D009682 6.9e-17 92.4 52 82.7
Dinv35466 Davidia involucrata HOM05D007544 ORTHO05D009682 6.9e-17 92.4 44 97.7
Dinv24122 Davidia involucrata HOM05D007544 ORTHO05D009682 8.9e-17 92.0 77 59.7
Dinv02329 Davidia involucrata HOM05D007544 ORTHO05D009682 2.6e-16 90.5 150 39.3
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 3.4e-16 90.1 166 31.9
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 1.3e-15 88.2 167 30.5
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 1.1e-14 85.1 147 38.1
Dinv00031 Davidia involucrata HOM05D007544 ORTHO05D009682 1.9e-14 84.3 271 28.0
Dinv01450 Davidia involucrata HOM05D007544 ORTHO05D006062 1.9e-14 84.3 271 28.0
Dinv09228 Davidia involucrata HOM05D007544 ORTHO05D009682 1.9e-14 84.3 52 76.9
Dinv26338 Davidia involucrata HOM05D007544 ORTHO05D009682 2.4e-14 84.0 194 34.5
Dinv29930 Davidia involucrata HOM05D007544 ORTHO05D009682 9.3e-14 82.0 52 75.0
Dinv30224 Davidia involucrata HOM05D007544 ORTHO05D006062 1.6e-13 81.3 270 27.4
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.3e-12 78.2 143 34.3
CSS0031619 Camellia sinensis var. sinensis HOM05D011426 ORTHO05D011041 5.1e-12 76.3 125 35.2
Dinv09242 Davidia involucrata HOM05D007544 ORTHO05D009682 8.7e-12 75.5 271 26.6
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 8.7e-12 75.5 112 34.8
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 2.5e-11 73.9 133 33.1
FAN05G1382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.3e-11 73.6 129 32.6
FAN16G2434 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.3e-11 73.6 129 32.6
FAN22G0991 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.3e-11 73.6 129 32.6
FAN25G0030 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.3e-11 73.6 129 32.6
Rhsim09G0059600 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.6e-11 72.8 121 32.2
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 7.3e-11 72.4 111 34.2
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 1.3e-10 71.6 111 33.3
FAN20G0366 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.6e-10 71.2 136 30.9
Rhsim01G0162700 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.6e-10 71.2 168 28.0
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 2.1e-10 70.9 133 33.8
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 2.1e-10 70.9 152 29.6
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.1e-10 70.9 122 32.8
FAN20G2217 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.8e-10 70.5 127 32.3
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.6e-10 70.1 152 29.6
Rhsim12G0186600 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.6e-10 70.1 152 29.6
RhsimUnG0238600 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.6e-10 70.1 125 32.8
AUR62039695 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.8e-10 69.7 111 33.3
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 4.8e-10 69.7 111 33.3
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.8e-10 69.7 152 29.6
Dinv01042 Davidia involucrata HOM05D007544 ORTHO05D009682 8.1e-10 68.9 60 66.7
Dinv24779 Davidia involucrata HOM05D007544 ORTHO05D009682 1.1e-09 68.6 30 100.0
FvH4_1g25481 Fragaria vesca HOM05D004096 ORTHO05D010213 1.1e-09 68.6 95 34.7
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.1e-09 68.6 92 35.9
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 1.4e-09 68.2 89 36.0
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 1.8e-09 67.8 89 36.0
Ciclev10023350m.g Citrus clementina HOM05D004096 ORTHO05D000898 1.8e-09 67.8 105 29.5
DCAR_031666 Daucus carota HOM05D033671 ORTHO05D035014 1.8e-09 67.8 77 39.0
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.8e-09 67.8 118 34.7
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 3.1e-09 67.0 152 28.9
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 3.1e-09 67.0 89 34.8
Ah.16g108450 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.0e-09 66.6 132 31.1
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 4.0e-09 66.6 130 26.9
AUR62019474 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.9e-09 65.9 89 40.4
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.9e-09 65.9 109 32.1
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 9.0e-09 65.5 95 32.6
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.0e-09 65.5 109 32.1
Ah.07g199310 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.2e-08 65.1 132 30.3
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 1.2e-08 65.1 111 28.8
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 1.2e-08 65.1 111 28.8
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 1.2e-08 65.1 111 28.8
arahy.Tifrunner.gnm1.ann1.5M52G7 Arachis hypogaea HOM05D009970 ORTHO05D010881 1.5e-08 64.7 93 32.3
EL10Ac7g17236 Beta vulgaris HOM05D002461 ORTHO05D000898 1.5e-08 64.7 112 32.1
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.5e-08 64.7 111 28.8
Dinv03415 Davidia involucrata HOM05D007544 ORTHO05D009682 1.5e-08 64.7 43 72.1
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 1.5e-08 64.7 111 28.8
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.5e-08 64.7 91 33.0
Dinv12698 Davidia involucrata HOM05D007544 ORTHO05D009682 2.0e-08 64.3 43 72.1
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 2.6e-08 63.9 89 33.7
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 2.6e-08 63.9 111 27.9
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 2.6e-08 63.9 111 27.9
RcHm_v2.0_Chr2g0155611 Rosa chinensis HOM05D010969 ORTHO05D015656 2.6e-08 63.9 126 27.8
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.4e-08 63.5 128 27.3
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 3.4e-08 63.5 88 33.0
CSS0002149 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 4.5e-08 63.2 91 34.1
FvH4_5g19752 Fragaria vesca HOM05D004096 ORTHO05D000898 4.5e-08 63.2 128 27.3
FAN21G3088 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.5e-08 63.2 95 32.6
arahy.Tifrunner.gnm1.ann1.B5LS3Q Arachis hypogaea HOM05D009970 ORTHO05D010881 5.8e-08 62.8 98 30.6
FvH4_7g05770 Fragaria vesca HOM05D004096 ORTHO05D000898 5.8e-08 62.8 128 27.3
FAN22G2114 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.8e-08 62.8 100 33.0
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 5.8e-08 62.8 89 32.6
Rhsim01G0103900 Rhododendron simsii HOM05D011426 ORTHO05D011041 7.6e-08 62.4 128 30.5
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 7.6e-08 62.4 81 35.8
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 9.9e-08 62.0 99 32.3
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 9.9e-08 62.0 119 31.1
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 1.3e-07 61.6 109 29.4
FvH4_7g12251 Fragaria vesca HOM05D004096 ORTHO05D000898 1.3e-07 61.6 128 27.3
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.3e-07 61.6 82 39.0
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 1.3e-07 61.6 109 29.4
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 1.7e-07 61.2 92 33.7
AUR62030606 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.7e-07 61.2 97 34.0
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 1.7e-07 61.2 97 30.9
arahy.Tifrunner.gnm1.ann1.MLQS0T Arachis hypogaea HOM05D010233 ORTHO05D010881 2.2e-07 60.8 86 37.2
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 2.2e-07 60.8 88 33.0
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 2.2e-07 60.8 109 29.4
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 2.9e-07 60.5 88 30.7
arahy.Tifrunner.gnm1.ann1.1S6XDY Arachis hypogaea HOM05D009970 ORTHO05D010881 2.9e-07 60.5 93 32.3
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 2.9e-07 60.5 81 35.8
FAN15G0550 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.9e-07 60.5 127 29.1
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 2.9e-07 60.5 109 29.4
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 2.9e-07 60.5 109 29.4
Rhsim02G0074000 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.8e-07 60.1 123 31.7
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.8e-07 60.1 85 37.6
AUR62033810 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.9e-07 59.7 87 34.5
RhsimUnG0238500 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.9e-07 59.7 112 32.1
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 6.4e-07 59.3 81 34.6
AUR62003732 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.4e-07 59.3 111 26.1
AUR62007003 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.4e-07 59.3 111 26.1
FAN13G2291 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.4e-07 59.3 127 27.6
FAN17G0441 Fragaria x ananassa HOM05D004096 ORTHO05D010213 6.4e-07 59.3 125 26.4
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 6.4e-07 59.3 92 32.6
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 6.4e-07 59.3 112 30.4
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 6.4e-07 59.3 91 31.9
arahy.Tifrunner.gnm1.ann1.Q04R2G Arachis hypogaea HOM05D009970 ORTHO05D010881 8.4e-07 58.9 93 29.0
CSS0032349 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 8.4e-07 58.9 91 36.3
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 8.4e-07 58.9 81 35.8
AUR62013325 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.4e-07 58.9 111 26.1
FAN03G1966 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-06 58.5 99 30.3
Rhsim12G0034100 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.1e-06 58.5 86 33.7
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.4e-06 58.2 81 33.3
AUR62013878 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-06 58.2 111 26.1
FAN15G0356 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-06 58.2 99 29.3
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 1.4e-06 58.2 81 34.6
arahy.Tifrunner.gnm1.ann1.PTJ2V9 Arachis hypogaea HOM05D008486 ORTHO05D010657 1.9e-06 57.8 143 25.2
AUR62008234 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.9e-06 57.8 111 26.1
AUR62041835 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.9e-06 57.8 101 30.7
AUR62042664 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.4e-06 57.4 87 33.3
Rhsim02G0127200 Rhododendron simsii HOM05D011344 ORTHO05D016379 2.4e-06 57.4 87 31.0
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 2.4e-06 57.4 79 34.2
arahy.Tifrunner.gnm1.ann1.RDK0TP Arachis hypogaea HOM05D008486 ORTHO05D010657 3.2e-06 57.0 106 33.0
CANSAT64G2369 Cannabis sativa HOM05D014696 ORTHO05D022147 3.2e-06 57.0 101 26.7
AUR62017232 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.2e-06 57.0 101 30.7
AUR62024626 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.2e-06 57.0 111 25.2
AUR62025566 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.2e-06 57.0 97 32.0
AUR62027923 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.2e-06 57.0 111 25.2
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 3.2e-06 57.0 81 34.6
Dinv10768 Davidia involucrata HOM05D007544 ORTHO05D009682 3.2e-06 57.0 46 54.3
FAN02G1156 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.2e-06 57.0 116 29.3
FAN09G3299 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.2e-06 57.0 95 29.5
FAN13G2044 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.2e-06 57.0 116 29.3
FAN13G3102 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.2e-06 57.0 116 29.3
FAN18G1768 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.2e-06 57.0 116 29.3
FAN18G2232 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.2e-06 57.0 116 29.3
FAN28G1999 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.2e-06 57.0 116 29.3
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 3.2e-06 57.0 103 30.1
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 4.2e-06 56.6 138 26.8
FAN03G2973 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.4e-06 56.2 80 33.8
FAN20G2128 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.4e-06 56.2 116 29.3
Lj6g0013971 Lotus japonicus HOM05D054428 ORTHO05D046695 5.4e-06 56.2 110 27.3
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 7.1e-06 55.8 76 35.5
Dinv02327 Davidia involucrata HOM05D007544 ORTHO05D009682 9.3e-06 55.5 49 53.1
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.3e-06 55.5 128 26.6
vmacro09225 Vaccinium macrocarpon HOM05D007651 ORTHO05D000898 9.3e-06 55.5 82 31.7


User provided reference genes

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