Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 3.4e-172 608.2 304 100.0
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 6.5e-147 524.2 304 82.9
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 8.5e-147 523.9 303 84.8
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 7.2e-146 520.8 304 82.9
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 7.2e-146 520.8 302 82.8
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.2e-145 520.0 303 82.8
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.6e-145 519.6 303 83.8
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 2.1e-145 519.2 304 81.9
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.6e-145 518.1 304 82.6
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 4.6e-145 518.1 306 83.0
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.8e-144 516.2 303 82.5
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 3.0e-144 515.4 303 82.5
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 3.9e-144 515.0 303 83.2
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.1e-143 513.5 303 81.8
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.5e-143 513.1 300 81.7
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.5e-143 512.3 303 81.5
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 4.3e-143 511.5 300 81.7
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 5.7e-143 511.1 303 82.5
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.3e-142 510.0 303 81.8
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.3e-142 510.0 303 80.5
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.7e-142 509.6 304 80.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.8e-142 508.8 304 81.9
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.8e-142 508.8 303 81.8
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 3.7e-142 508.4 303 81.8
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.7e-142 508.4 303 82.2
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 6.3e-142 507.7 304 81.9
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.4e-141 506.5 301 80.4
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.8e-141 506.1 302 80.1
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.1e-141 505.4 298 80.9
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 5.3e-141 504.6 295 81.0
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 5.3e-141 504.6 304 79.9
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.6e-140 502.3 298 80.5
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 4.5e-140 501.5 302 81.1
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 4.5e-140 501.5 295 82.0
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.3e-139 500.0 317 77.9
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.7e-139 499.6 304 81.6
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.2e-139 499.2 298 80.2
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.2e-139 499.2 325 76.3
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 2.9e-139 498.8 290 82.8
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.8e-139 498.4 303 79.5
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.8e-139 498.4 303 79.5
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.8e-139 498.4 303 80.2
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 3.8e-139 498.4 300 79.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 5.0e-139 498.0 303 79.9
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 8.5e-139 497.3 303 79.2
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.1e-138 496.9 295 81.7
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.9e-138 496.1 303 78.9
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.9e-138 496.1 302 79.5
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.2e-138 495.4 316 77.2
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.2e-138 495.0 303 78.9
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 5.5e-138 494.6 300 78.7
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 4.7e-137 491.5 301 80.4
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.4e-136 490.0 297 78.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 6.7e-136 487.6 299 78.6
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 7.4e-135 484.2 351 69.8
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 4.8e-134 481.5 325 75.1
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 5.3e-133 478.0 277 82.7
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 7.7e-132 474.2 297 77.1
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.0e-131 473.8 297 76.1
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 3.8e-131 471.9 304 74.7
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 8.5e-131 470.7 297 75.4
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.5e-130 469.9 298 76.8
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 1.9e-130 469.5 297 75.8
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 7.2e-130 467.6 298 75.2
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.2e-129 466.8 304 73.4
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.2e-129 466.8 295 75.6
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.2e-129 466.8 333 71.5
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.6e-129 466.5 293 75.1
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 2.1e-129 466.1 293 76.1
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 3.6e-129 465.3 293 76.1
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.7e-129 464.9 294 75.9
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 6.1e-129 464.5 299 76.3
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.0e-128 463.8 302 76.2
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.0e-128 463.8 293 75.8
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.0e-128 463.8 293 75.8
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.0e-128 463.8 293 75.8
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.4e-128 463.4 296 75.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 3.0e-128 462.2 296 74.3
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.5e-127 459.9 297 74.1
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 4.4e-127 458.4 296 74.7
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.3e-126 456.8 264 82.2
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 4.8e-126 454.9 300 74.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 9.1e-125 450.7 297 74.1
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.2e-124 450.3 292 72.9
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.6e-124 449.9 318 69.8
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 2.9e-123 445.7 298 69.8
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 8.0e-121 437.6 293 71.0
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 1.4e-120 436.8 295 70.5
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 4.4e-119 431.8 292 71.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 4.1e-117 425.2 299 69.9
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 1.3e-115 420.2 264 75.0
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 4.7e-113 411.8 294 70.4
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 9.8e-111 404.1 296 66.6
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.2e-103 380.6 221 81.0
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.8e-101 373.2 289 59.5
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 5.2e-96 355.1 300 57.7
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 2.6e-95 352.8 307 58.6
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 2.9e-94 349.4 206 81.6
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 1.1e-90 337.4 285 57.5
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.5e-90 337.0 192 81.2
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.6e-79 299.7 192 73.4
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.3e-78 297.4 187 76.5
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.9e-69 266.9 167 77.8
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 4.6e-68 262.3 152 86.2
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.0e-67 261.2 259 51.7
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 6.2e-65 251.9 145 81.4
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.9e-59 232.6 152 72.4
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.9e-52 208.4 142 73.9
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 9.3e-45 184.9 115 80.9
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.9e-42 177.2 106 83.0
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 2.0e-31 140.6 89 80.9
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.2e-29 132.9 77 85.7
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 7.4e-26 122.1 73 78.1
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.8e-25 120.2 118 56.8
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 8.2e-25 118.6 72 77.8
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 4.1e-24 116.3 308 26.3
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 5.3e-24 115.9 323 26.3
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 9.4e-21 105.1 329 26.7
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.8e-11 74.3 41 85.4


User provided reference genes

Program Settings